BAC Information

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BAC

Clone NameB6Ng01-182E11
Chromosome2 (Build37)
Map Location 83,023,484 - 83,145,399
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
Downstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182E11.bB6Ng01-182E11.g
ACCGA008214GA008215
length1,115996
definitionB6Ng01-182E11.b B6Ng01-182E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,144,272 - 83,145,399)(83,023,484 - 83,024,477)
sequence
gaattcaaatttaacagttcagattagaccattttattgtagataagaat
cccaaggaaacaattcctaataaagagggatattttaggaatatatcgat
ctatggtttccagtcagaaacttgacaatgagtgttattacattttccag
ttgttttaaagaacgtttcataaaatctcaaaaattaaatgactcagatg
tagtggtgtacaactataaacatttgagaggcaggatcatgggatcatgg
cttgaggccagcctgggctacattgtaagatatatttcaaaataataata
atgccaacaataacagtaaagcaaaatgaaggctggaaatatggctcaat
tgcttgacctttatatgtaagactagattttgataacactgaaaaaatag
taaattaattatgctttgtgttttcatagaatagaaattttgatactgta
cttattttaaagtaagtaaagatttggcaatattgctatagtaaaatact
cattaatgtaaagaaatttaagtttatgtattttcttatctgttgtagtt
atcattcatagatgaatctacttcatgatacaaaagcaaagctaccattt
atcattaaaagaggaggtgctattattaaatatttattatgcagttggct
agtgaaaattatagtaaaaatattctgtgaatccatgtttacagtctctc
tatgaggaggtattcatcattgttttggttttaatatttaagaaggggag
gcttaacgcttttgttcctgttcctgaatctgtttagtcatcgttggagg
aatttgaactaggcagccacactgctaagatctttgcttcaaaaatattt
attttgctttgcctttggaaatcaagatcaaaccagattgtctctatctg
gagtatatacggtctatttcataggcaacagtttttttttttaaacaaag
atataaattcagtacaaaatatgacataattatgtctagatgatctggat
atttcacagaaaagagagaatcaagctgcatctagcatgtgtgtgagttc
ttcttattgtaaagcaggggtgatggtgcatttgaacaaattgtgtgaac
atcaaagcttatgtg

gaattcaaaaatatgatcctctccactttgttcttatacaatagtgcctg
gctattcatggtatctcatgattttaataaatttagttttgttttctatt
tctttagtcaatacctttgacatttgtaagagagtatattgaatttgtag
atcttttttatagaataaacatcttaataaaattaaatcttccaatctat
gaatttgaaatatctttcattttatctgtgtctgctttctgacctttatt
ggtgatttgaaggtcaagatattaagaaataatttatctcctttgttagg
tttgcttacaaatagttttatgctattattaaggttatacatccatacag
acaagatttacaataattttatacaacaaaaataagtgaagaatatttta
aactgtcctctacctataatttgtcatgattattatgaatgtcgtgacta
ttataaaaatattaagaatgtaaggagacaaatttatccatttttgaaat
acgtgtctattaaattaacttacttttccctaattaaaggcataaatact
cctctagaacattactatatcttcccattgcttttatttttctggttgag
agatattttacagatatcattctctattttatctaccacactcctgtcca
attggtactaactggccagttttcttaagtgtgccaataaaactgtaatg
aagtgtgtctaagggtgtcaaaggccattaacatatgtactttttatagc
tgtcattactttatagaactataaaatttcatttctcagtatctagagaa
attgagggatgccatgtatcttagttactttttcactactttgaacactg
tgttcaatttataaaataaagcatttagggggtgtttttcagttttaaaa
gttgagtccatagccatctgggtgggaagcgtggcaggaagcaagtaggc
atatagtgctacagcaggagctgagggtttccatctgatcccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_83144272_83145399
seq2: B6Ng01-182E11.b_40_1154 (reverse)

seq1  CACATAAGCTTTTAGAATGTCACACAAATTTGTTCAAATGCACCATCAAC  50
      ||||||||||||  ||   |||||| ||||||||||||||||||||| ||
seq2  CACATAAGCTTT--GATGTTCACAC-AATTTGTTCAAATGCACCATC-AC  46

seq1  CCCTGCTTTAACAAT-AGAGAGACTCACACACATGCTAGAATGCAGCTTG  99
      ||||||||| ||||| |||   ||||||||||||||||| ||||||||||
seq2  CCCTGCTTT-ACAATAAGAAGAACTCACACACATGCTAG-ATGCAGCTTG  94

seq1  AATTCTCTCTTTTCTGTGAAATATTCCCAGATCATTCTAGACATAATTTT  149
       |||||||||||||||||||||||  |||||||| |||||||||||  ||
seq2  -ATTCTCTCTTTTCTGTGAAATAT--CCAGATCA-TCTAGACATAA--TT  138

seq1  ATGTTCATATTTTTGTACTGAATTTATATCTTTGTTT-AAAAAAAAAACT  198
      ||| ||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  ATG-TCATA-TTTTGTACTGAATTTATATCTTTGTTTAAAAAAAAAAACT  186

seq1  GTTGCCTATTGAAATAGACCGTATATACTCCAGATAGAGACAATCTGGTT  248
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTA-TGAAATAGACCGTATATACTCCAGATAGAGACAATCTGGTT  235

seq1  TGATCTTGATTTCCAAAGGCAAAGCAAAATAAATATTTTTGAAGCAAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTGATTTCCAAAGGCAAAGCAAAATAAATATTTTTGAAGCAAAGA  285

seq1  TCTTAGCAGTGTGGCTGCCTAGTTCAAATTCCTCCAACGATGACTAAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCAGTGTGGCTGCCTAGTTCAAATTCCTCCAACGATGACTAAACA  335

seq1  GATTCAGGAACAGGAACAAAAGCGTTAAGCCTCCCCTTCTTAAATATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGGAACAGGAACAAAAGCGTTAAGCCTCCCCTTCTTAAATATTAA  385

seq1  AACCAAAACAATGATGAATACCTCCTCATAGAGAGACTGTAAACATGGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAACAATGATGAATACCTCCTCATAGAGAGACTGTAAACATGGAT  435

seq1  TCACAGAATATTTTTACTATAATTTTCACTAGCCAACTGCATAATAAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAATATTTTTACTATAATTTTCACTAGCCAACTGCATAATAAATA  485

seq1  TTTAATAATAGCACCTCCTCTTTTAATGATAAATGGTAGCTTTGCTTTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAATAGCACCTCCTCTTTTAATGATAAATGGTAGCTTTGCTTTTG  535

seq1  TATCATGAAGTAGATTCATCTATGAATGATAACTACAACAGATAAGAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGAAGTAGATTCATCTATGAATGATAACTACAACAGATAAGAAAA  585

seq1  TACATAAACTTAAATTTCTTTACATTAATGAGTATTTTACTATAGCAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAACTTAAATTTCTTTACATTAATGAGTATTTTACTATAGCAATA  635

seq1  TTGCCAAATCTTTACTTACTTTAAAATAAGTACAGTATCAAAATTTCTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAATCTTTACTTACTTTAAAATAAGTACAGTATCAAAATTTCTAT  685

seq1  TCTATGAAAACACAAAGCATAATTAATTTACTATTTTTTCAGTGTTATCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAAAACACAAAGCATAATTAATTTACTATTTTTTCAGTGTTATCA  735

seq1  AAATCTAGTCTTACATATAAAGGTCAAGCAATTGAGCCATATTTCCAGCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGTCTTACATATAAAGGTCAAGCAATTGAGCCATATTTCCAGCC  785

seq1  TTCATTTTGCTTTACTGTTATTGTTGGCATTATTATTATTTTGAAATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGCTTTACTGTTATTGTTGGCATTATTATTATTTTGAAATATA  835

seq1  TCTTACAATGTAGCCCAGGCTGGCCTCAAGCCATGATCCCATGATCCTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAATGTAGCCCAGGCTGGCCTCAAGCCATGATCCCATGATCCTGC  885

seq1  CTCTCAAATGTTTATAGTTGTACACCACTACATCTGAGTCATTTAATTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAATGTTTATAGTTGTACACCACTACATCTGAGTCATTTAATTTT  935

seq1  TGAGATTTTATGAAACGTTCTTTAAAACAACTGGAAAATGTAATAACACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTATGAAACGTTCTTTAAAACAACTGGAAAATGTAATAACACT  985

seq1  CATTGTCAAGTTTCTGACTGGAAACCATAGATCGATATATTCCTAAAATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCAAGTTTCTGACTGGAAACCATAGATCGATATATTCCTAAAATA  1035

seq1  TCCCTCTTTATTAGGAATTGTTTCCTTGGGATTCTTATCTACAATAAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTATTAGGAATTGTTTCCTTGGGATTCTTATCTACAATAAAAT  1085

seq1  GGTCTAATCTGAACTGTTAAATTTGAATTC  1128
      ||||||||||||||||||||||||||||||
seq2  GGTCTAATCTGAACTGTTAAATTTGAATTC  1115


seq1: chr2_83023484_83024477
seq2: B6Ng01-182E11.g_67_1062

seq1  GAATTCAAAAATATGATCCTCTCCACTTTGTTCTTATACAATAGTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATATGATCCTCTCCACTTTGTTCTTATACAATAGTGCCTG  50

seq1  GCTATTCATGGTATCTCATGATTTTAATAAATTTAGTTTTGTTTTCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCATGGTATCTCATGATTTTAATAAATTTAGTTTTGTTTTCTATT  100

seq1  TCTTTAGTCAATACCTTTGACATTTGTAAGAGAGTATATTGAATTTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTCAATACCTTTGACATTTGTAAGAGAGTATATTGAATTTGTAG  150

seq1  ATCTTTTTTATAGAATAAACATCTTAATAAAATTAAATCTTCCAATCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTATAGAATAAACATCTTAATAAAATTAAATCTTCCAATCTAT  200

seq1  GAATTTGAAATATCTTTCATTTTATCTGTGTCTGCTTTCTGACCTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAAATATCTTTCATTTTATCTGTGTCTGCTTTCTGACCTTTATT  250

seq1  GGTGATTTGAAGGTCAAGATATTAAGAAATAATTTATCTCCTTTGTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGAAGGTCAAGATATTAAGAAATAATTTATCTCCTTTGTTAGG  300

seq1  TTTGCTTACAAATAGTTTTATGCTATTATTAAGGTTATACATCCATACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTACAAATAGTTTTATGCTATTATTAAGGTTATACATCCATACAG  350

seq1  ACAAGATTTACAATAATTTTATACAACAAAAATAAGTGAAGAATATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTACAATAATTTTATACAACAAAAATAAGTGAAGAATATTTTA  400

seq1  AACTGTCCTCTACCTATAATTTGTCATGATTATTATGAATGTCGTGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCCTCTACCTATAATTTGTCATGATTATTATGAATGTCGTGACTA  450

seq1  TTATAAAAATATTAAGAATGTAAGGAGACAAATTTATCCATTTTTGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAATATTAAGAATGTAAGGAGACAAATTTATCCATTTTTGAAAT  500

seq1  ACGTGTCTATTAAATTAACTTACTTTTCCCTAATTAAAGGCATAAATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCTATTAAATTAACTTACTTTTCCCTAATTAAAGGCATAAATACT  550

seq1  CCTCTAGAACATTACTATATCTTCCCATTGCTTTTATTTTTCTGGTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGAACATTACTATATCTTCCCATTGCTTTTATTTTTCTGGTTGAG  600

seq1  AGATATTTTACAGATATCATTCTCTATTTTATCTACCACACTCCTGTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTTACAGATATCATTCTCTATTTTATCTACCACACTCCTGTCCA  650

seq1  ATTGGTACTAACTGGCCAGTTTTCTTAAGTGTGCCAATAAAACTGTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTACTAACTGGCCAGTTTTCTTAAGTGTGCCAATAAAACTGTAATG  700

seq1  AAGTGTGTCTAAGGGTGTCAAAGGCCATTAACATATGTACTTTTTATAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTCTAAGGGTGTCAAAGGCCATTAACATATGTACTTTTTATAGC  750

seq1  TGTCATTACTTTATAGAACTATAAAATTTCATTTCTCAGTATCTAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTACTTTATAGAACTATAAAATTTCATTTCTCAGTATCTAGAGAA  800

seq1  ATTGAGGGATGCCATGTATCTTAGTTACTTTTTCACTACTTTGAACACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGGATGCCATGTATCTTAGTTACTTTTTCACTACTTTGAACACTG  850

seq1  TGTTCAATTTATAAAATAAAGCATTTAGGGGGTG-TTTTCAGTTTTAAAA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTTCAATTTATAAAATAAAGCATTTAGGGGGTGTTTTTCAGTTTTAAAA  900

seq1  GTTGAGTCCATAGCCATCTTGGTGGGAAGCGTGGCAGGAAGCAGGTAGGC  949
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  GTTGAGTCCATAGCCATCTGGGTGGGAAGCGTGGCAGGAAGCAAGTAGGC  950

seq1  --ATAGTGCTACAGCAGGAGCTGAGGGTTTCCATCTGATCCACAAAA  994
        ||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATATAGTGCTACAGCAGGAGCTGAGGGTTTCCATCTGATCC-CAAAA  996


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