BAC Information

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BAC

Clone NameB6Ng01-182J03
Chromosome2 (Build37)
Map Location 46,774,202 - 46,775,347
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383690
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182J03.bB6Ng01-182J03.g
ACCGA008424GA008425
length1,1351,157
definitionB6Ng01-182J03.b B6Ng01-182J03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtgacaaaaaattctggtagtagtgaacaaagataaaaatat
aagaatatcccctaggacactattggtaatattaaaaattggaagcaacc
caaatgcccaatattacagtaatggcatagtgagtgtgatatagtcttat
aataaaataatatgcagcatttaaaagaaatgggatagatctcaatgtac
cgatttggaaagaagcccaaaatacattgaaagcagaaacactgcattaa
tggtatttataaataaccacatcagattcatgaacattgttgtacatgga
aaggaaatattccttaaaaataaatgggaaatggaagtacatttttgagt
aaagattatatttttgcatttatgtatctttcttgatttgttttttaaaa
agatttagatattattctaaatattattatattattagatattaagtatt
attttattttttaaaattaaaatataattatagtttcaccttcccttttc
tacctctaaatcctcacatgtaccttcttattcttttttcaatttatggt
ctctgcttctttgattgttcttaaatataaatgtgttcatagttatatgt
ttgcatatattcctagatatatataatacttcctgctaagactatataaa
ggtactatgtggttttatacacacacacacacacacacacacacacacac
acacacacacacacacacacacatatatatttatgtgtgtgtgtgtaatt
tcagggctgacaaattgacttatttattttattctattaacatgtgtctt
tacctgcacatatgtctggacaccatgtctcaacaagtgtccagtgagac
cagaagagagtaccaaatcttctagaactataattgtagaacactattag
tatcttgtggggttctgggaactaaacctagtttacctgaaagaacaaca
agtgaccctatcttctgagctatctcctgaggcctcctatttttcttgct
tcaaatatatactgatatgcctaatggtaagaaagaataaaaatctaaaa
gtaacagatgtttagcagaaaaatgatatagaacaaaagtagacttagat
ttggtaacactcaatagcataaaatacaaaaattt

gaattcaatgtgcaggtaagaccttagtacaagtagaatttagcactgat
cttagagaagaatataaaactaaggctgtcacatttttgttaaggtaaac
tatttctatactaaataattttattctgtacacttaattatatttaagtt
actatagaaaattgataataattattttatgagatttatgataactcatg
agagtgttatttatttaccaattatagtgaatagtagttgatattcacga
aaagagtgtcaatagtgttaccaaaacataataacatttatgattatcca
acaagaaaatgtaagctaataaaatgccacatatctgtttcttctgtctt
aactttgagcctatcacttatatgctacatgttcttttcattaaaaattt
taactgaattgattttaaccaattcatagttttttctttacaaaattctt
ttaggatgacttagtaagctgaagagaatttgtaaagttgggtggcatgg
ttatatttatttatttatttatttatttatttatttacttacgtacttac
ttacttacttatttaattaatcattccattggtttgcatcttccacttcc
ctctacacttgggcataaaacctttacaggaccaagggcttcctcaccca
ttgatgtcagacaaggctttcctttgccccatatgtatctggagccatgg
atccctttgtgtacactccttggttggtggtctagtctctaggagtactg
ggtagtcagcaagccaacattgttcttcctatggtgttaaaaatccccct
ctgcttctccattccttcctccagctcccccaccagggtcttgggtgctc
agactgatgtttggctccaagcattcacatttgcattggtcagttgctgg
cagacctctcaaggaaagccagaccaggttcctgtctcttgacaacatta
gcagtgtccgggtttggcttctgaagatgggatgaatccatcaggtgggc
caggccctggaatggcttcttctcagtctctgttaacggtttttgtctct
gcttccttggcaagatcaattcctggattaaatcttgagaatgagtatgg
tgccccatcctcgcactgaagagggccatataccacatggaagaggtctc
tcacacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46774202_46775347
seq2: B6Ng01-182J03.b_30_1164

seq1  GAATTCATGTGACAAAAAATTCTGGTAGTAGTGAACAAAGATAAAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGACAAAAAATTCTGGTAGTAGTGAACAAAGATAAAAATAT  50

seq1  AAGAATATCCCCTAGGACACTATTGGTAATATTAAAAATTGGAAGCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATCCCCTAGGACACTATTGGTAATATTAAAAATTGGAAGCAACC  100

seq1  CAAATGCCCAATATTACAGTAATGGCATAGTGAGTGTGATATAGTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCCCAATATTACAGTAATGGCATAGTGAGTGTGATATAGTCTTAT  150

seq1  AATAAAATAATATGCAGCATTTAAAAGAAATGGGATAGATCTCAATGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAATATGCAGCATTTAAAAGAAATGGGATAGATCTCAATGTAC  200

seq1  CGATTTGGAAAGAAGCCCAAAATACATTGAAAGCAGAAACACTGCATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTGGAAAGAAGCCCAAAATACATTGAAAGCAGAAACACTGCATTAA  250

seq1  TGGTATTTATAAATAACCACATCAGATTCATGAACATTGTTGTACATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTTATAAATAACCACATCAGATTCATGAACATTGTTGTACATGGA  300

seq1  AAGGAAATATTCCTTAAAAATAAATGGGAAATGGAAGTACATTTTTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATATTCCTTAAAAATAAATGGGAAATGGAAGTACATTTTTGAGT  350

seq1  AAAGATTATATTTTTGCATTTATGTATCTTTCTTGATTTGTTTTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTATATTTTTGCATTTATGTATCTTTCTTGATTTGTTTTTTAAAA  400

seq1  AGATTTAGATATTATTCTAAATATTATTATATTATTAGATATTAAGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGATATTATTCTAAATATTATTATATTATTAGATATTAAGTATT  450

seq1  ATTTTATTTTTTAAAATTAAAATATAATTATAGTTTCACCTTCCCTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTTTAAAATTAAAATATAATTATAGTTTCACCTTCCCTTTTC  500

seq1  TACCTCTAAATCCTCACATGTACCTTCTTATTCTTTTTTCAATTTATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTAAATCCTCACATGTACCTTCTTATTCTTTTTTCAATTTATGGT  550

seq1  CTCTGCTTCTTTGATTGTTCTTAAATATAAATGTGTTCATAGTTATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCTTTGATTGTTCTTAAATATAAATGTGTTCATAGTTATATGT  600

seq1  TTGCATATATTCCTAGATATATATAATACTTCCTGCTAAGACTATATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATATTCCTAGATATATATAATACTTCCTGCTAAGACTATATAAA  650

seq1  GGTACTATGTGGTTTTATACACACACACACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTATGTGGTTTTATACACACACACACACACACACACACACACACAC  700

seq1  ACACACACACACACACACACACATATATATTTATGTGTGTGTGTGTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACATATATATTTATGTGTGTGTGTGTAATT  750

seq1  TCAGGGCTGACAAATTGACTTATTTATTTTATTCTATTAACATGTGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCTGACAAATTGACTTATTTATTTTATTCTATTAACATGTGTCTT  800

seq1  TACCTGCACATATGTCTGGACACCATGTCTCAAC-AGTGTCCAGTGAGAC  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACCTGCACATATGTCTGGACACCATGTCTCAACAAGTGTCCAGTGAGAC  850

seq1  CAGAAGAGAGTACCAAATCTTCTAGAACTATAATTGTAGAACACTATTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGAGTACCAAATCTTCTAGAACTATAATTGTAGAACACTATTAG  900

seq1  TATCTTGT-GGGTTCTGGGAACTAAACCTAGTTTACCTGAAAGAACAACA  948
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGTGGGGTTCTGGGAACTAAACCTAGTTTACCTGAAAGAACAACA  950

seq1  AGTGACCCTATCTTCTGAGCTATCTCCTGAGGCCCTCCCTATTTTCTTGC  998
      |||||||||||||||||||||||||||||||| |||||   |||||||||
seq2  AGTGACCCTATCTTCTGAGCTATCTCCTGAGG-CCTCCTATTTTTCTTGC  999

seq1  TTTTCAAATATATACTGATAATTGCCTTATGGTAAGAAAAGATAAAAATC  1048
        ||||||||||||||||||  ||||| |||||||||||  |||||||||
seq2  --TTCAAATATATACTGATA--TGCCTAATGGTAAGAAAGAATAAAAATC  1045

seq1  TAAAAAGGTAACAG-TGTTAAGCAGAAAAATTGGATTATAAGACAAAAGT  1097
      |||||  ||||||| |||| |||||||||||  || ||||  ||||||||
seq2  TAAAA--GTAACAGATGTTTAGCAGAAAAAT--GA-TATAGAACAAAAGT  1090

seq1  AGAACTTATGATTTGTGTACCA-TCATATAGCATAAAATACAAAATATTT  1146
      || ||||| |||||| ||| || ||| |||||||||||||||||| ||||
seq2  AG-ACTTA-GATTTG-GTAACACTCA-ATAGCATAAAATACAAAA-ATTT  1135


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