BAC Information

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BAC

Clone NameB6Ng01-183C07
Chromosome2 (Build37)
Map Location 32,504,949 - 32,656,690
singlet/doubletdoublet
Overlap geneEng, Fpgs, Cdk9, Sh2d3c, Tor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1
Upstream genePrdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1
Downstream gene9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183C07.bB6Ng01-183C07.g
ACCGA008848GA008849
length1,098306
definitionB6Ng01-183C07.b B6Ng01-183C07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,655,603 - 32,656,690)(32,504,949 - 32,505,254)
sequence
gaattcactctatagaccaggctggtttcgaactcacaaatccgcctgcc
ttttcctcccaagtgctgggattaaaggcgtgcgccaccactgcctggct
ccaactggtgtctctaggagggactaggttccactgacctgaccagtgac
ctgcagctggcagggtttggtgtgttcatacctgggtcacaaaaggctca
aaacagtagaactgattcgtttaaaactgcccatgctgctacacagagaa
actctgtctcaaagaatcaaaaaacaaaacaaaccctagaaaacccagac
ttgctcaagtctcccttgtttcagagtttcttaaagaggtatatttcagg
gctactctgagcagaacctctcctttattactctttgccatgttaattct
gaggagggtccttgagagaattcctagaagtcactgagacccaggatggc
ccctgactggcatctaacctgatgggtgcttgctttcagtccacactacg
ccgccgaagcaaaccggagcggaaggagcgtatcagtgagcagacctacc
agctctcacgatggaccccgatcattaaagacattatggaggtcagtttg
gggttcagcagcagggtccagggctgctcttcagtaggtggtccaagttc
caacacccctgttctcaggtagcagtgacacactatgattttgttcctgt
gaggatgagtccctggtcctctgtggctctgtcaatctctgaggactcat
gaacacccatgggactggttgtagtttggggtactattgctgtgatgaaa
caccaggaccaaaagtaacttgaagaggggggggcatcactgtttcatca
ttcaaaggcattcagggcaagagctcattacagggatggaacctggagca
gagctgatgcagaggccatggaggagttgctgtcttacttggcttgctcc
tcgtggctttgctcagtctacttccttatagcaaccaggcccaccagcca
gtaacctgggccctcttacatcgttcactaaataagataatgcttccagg
aggcttacctacaatctggatccgaaggagtcggagtttccctcctct
ctttaaagaacatgcgtgtggagattcttaaagaacaacttaaccatgtg
tctgttccccaaggaaaacagatgaatgaggggctctggggtacagctat
gtggcaaagcacttagtaggctaggaggacagagggaggcatggcggcca
cacctgtcataccagtagtcagggggtagaggcgggatcagaaagtggat
cacaagctcaaggccagactggactagatgaagacctgtcttgagagaag
tggggggcaggggagcaagggaatggagtgggggagataagaagagatgg
gggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32655603_32656690
seq2: B6Ng01-183C07.b_47_1144 (reverse)

seq1  AGAGGAGGG-AACT-CGACTCCTTCGGAT-CAGGTTGTAGGTAAGCCT-C  46
      ||||||||| |||| |||||||||||||| ||| |||||||||||||| |
seq2  AGAGGAGGGAAACTCCGACTCCTTCGGATCCAGATTGTAGGTAAGCCTCC  50

seq1  TGG-AGCATTATCTTATTTAGTGAACGATGTAGGAGGGCCCAGGTTACTG  95
      ||| |||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TGGAAGCATTATCTTATTTAGTGAACGATGTAAGAGGGCCCAGGTTACT-  99

seq1  GGCTGGTGGGCCTGGTTGCTATAAGGAAGTAGGCTGAGC-AAGCCACGAG  144
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  GGCTGGTGGGCCTGGTTGCTATAAGGAAGTAGACTGAGCAAAGCCACGAG  149

seq1  GAGCAAGCC-AGTAAG-CAGC-ACTCCTCCATGGCCTCTGCATCAGCTCC  191
      ||||||||| |||||| |||| |||||||||||||||||||||||||| |
seq2  GAGCAAGCCAAGTAAGACAGCAACTCCTCCATGGCCTCTGCATCAGCT-C  198

seq1  TGCTCCAGGTTCCATCCCTGT-ATGAGCTCTTGCCCTGAATGCCTTTG-A  239
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  TGCTCCAGGTTCCATCCCTGTAATGAGCTCTTGCCCTGAATGCCTTTGAA  248

seq1  TGATGAAACAGTGATG-CCCCCCCTCTTCAAGTTACTTTTGGTCCTGGTG  288
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGATGAAACAGTGATGCCCCCCCCTCTTCAAGTTACTTTTGGTCCTGGTG  298

seq1  TTTCATCACAGCAATAGTACCCCAAACTACAACCAGTCCCATGGGTGTTC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCACAGCAATAGTACCCCAAACTACAACCAGTCCCATGGGTGTTC  348

seq1  ATGAGTCCTCAGAGATTGACAGAGCCACAGAGGACCAGGGACTCATCCTC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCTCAGAGATTGACAGAGCCACAGAGGACCAGGGACTCATCCTC  398

seq1  ACAGGAACAAAATCATAGTGTGTCACTGCTACCTGAGAACAGGGGTGTTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACAAAATCATAGTGTGTCACTGCTACCTGAGAACAGGGGTGTTG  448

seq1  GAACTTGGACCACCTACTGAAGAGCAGCCCTGGACCCTGCTGCTGAACCC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGGACCACCTACTGAAGAGCAGCCCTGGACCCTGCTGCTGAACCC  498

seq1  CAAACTGACCTCCATAATGTCTTTAATGATCGGGGTCCATCGTGAGAGCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGACCTCCATAATGTCTTTAATGATCGGGGTCCATCGTGAGAGCT  548

seq1  GGTAGGTCTGCTCACTGATACGCTCCTTCCGCTCCGGTTTGCTTCGGCGG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTCTGCTCACTGATACGCTCCTTCCGCTCCGGTTTGCTTCGGCGG  598

seq1  CGTAGTGTGGACTGAAAGCAAGCACCCATCAGGTTAGATGCCAGTCAGGG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTGTGGACTGAAAGCAAGCACCCATCAGGTTAGATGCCAGTCAGGG  648

seq1  GCCATCCTGGGTCTCAGTGACTTCTAGGAATTCTCTCAAGGACCCTCCTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTGGGTCTCAGTGACTTCTAGGAATTCTCTCAAGGACCCTCCTC  698

seq1  AGAATTAACATGGCAAAGAGTAATAAAGGAGAGGTTCTGCTCAGAGTAGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAACATGGCAAAGAGTAATAAAGGAGAGGTTCTGCTCAGAGTAGC  748

seq1  CCTGAAATATACCTCTTTAAGAAACTCTGAAACAAGGGAGACTTGAGCAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATATACCTCTTTAAGAAACTCTGAAACAAGGGAGACTTGAGCAA  798

seq1  GTCTGGGTTTTCTAGGGTTTGTTTTGTTTTTTGATTCTTTGAGACAGAGT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGTTTTCTAGGGTTTGTTTTGTTTTTTGATTCTTTGAGACAGAGT  848

seq1  TTCTCTGTGTAGCAGCATGGGCAGTTTTAAACGAATCAGTTCTACTGTTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTAGCAGCATGGGCAGTTTTAAACGAATCAGTTCTACTGTTT  898

seq1  TGAGCCTTTTGTGACCCAGGTATGAACACACCAAACCCTGCCAGCTGCAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTTTTGTGACCCAGGTATGAACACACCAAACCCTGCCAGCTGCAG  948

seq1  GTCACTGGTCAGGTCAGTGGAACCTAGTCCCTCCTAGAGACACCAGTTGG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGGTCAGGTCAGTGGAACCTAGTCCCTCCTAGAGACACCAGTTGG  998

seq1  AGCCAGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGAAAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGAAAA  1048

seq1  GGCAGGCGGATTTCTGAGTTCGAAACCAGCCTGGTCTATAGAGTGAATTC  1088
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCGGATTTGTGAGTTCGAAACCAGCCTGGTCTATAGAGTGAATTC  1098

seq1: chr2_32504949_32505254
seq2: B6Ng01-183C07.g_69_374

seq1  CTTTAAAGAACATGCGTGTGGAGATTCTTAAAGAACAACTTAACCATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGAACATGCGTGTGGAGATTCTTAAAGAACAACTTAACCATGTG  50

seq1  TCTGTTCCCCAAGGAAAACAGATGAATGAGGGGCTCTGGGGTACAGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCCCCAAGGAAAACAGATGAATGAGGGGCTCTGGGGTACAGCTAT  100

seq1  GTGGCAAAGCACTTAGTAGGCTAGGAGGACAGAGGGAGGCATGGCGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAAGCACTTAGTAGGCTAGGAGGACAGAGGGAGGCATGGCGGCCA  150

seq1  CACCTGTCATACCAGTAGTCAGGGGGTAGAGGCGGGATCAGAAAGTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTCATACCAGTAGTCAGGGGGTAGAGGCGGGATCAGAAAGTGGAT  200

seq1  CACAAGCTCAAGGCCAGACTGGACTAGATGAAGACCTGTCTTGAGAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTCAAGGCCAGACTGGACTAGATGAAGACCTGTCTTGAGAGAAG  250

seq1  TGGGGGGCAGGGGAGCAAGGGAATGGAGTGGGGGAGATAAGAAGAGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGCAGGGGAGCAAGGGAATGGAGTGGGGGAGATAAGAAGAGATGG  300

seq1  GGGAAA  306
      ||||||
seq2  GGGAAA  306