BAC Information

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BAC

Clone NameB6Ng01-183M19
Chromosome2 (Build37)
Map Location 36,542,074 - 36,543,178
singlet/doubletsinglet
Overlap genenone
Upstream geneDab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345
Downstream geneOlfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1, Gpr21, 6430510M02Rik, Strbp, LOC639491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183M19.bB6Ng01-183M19.g
ACCGA009335GA009336
length1,1261,127
definitionB6Ng01-183M19.b B6Ng01-183M19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatctctgagccccatatttaaatggggttatttgatt
ttctgaagtccaccttcttgagttctttttatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttatgtcttattgatggtgtcttttgccttgcagaagctttgcagtttca
tgaagtcccatttgtcatttcttgatcttacagcacaagccactgatgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggattttccccac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttagttttgaccttatattcagaattgagagttcctcttggagga
ttttacctttcatgagtatgaagtgttcctccttttcttttttgataact
ttgggttggaagtcgattttattcgatattagaatggctactccagcttg
tttcttcctaccatttgcttggaaaattgttttccagcatttcactctga
ggttgtgtctggccttttctctgagatgggtttcctgtaagcagcagaat
gttgggtcctgtttgtgtaaccagtctgttagtctatgtctttttattgg
gtaattaagtccattgatattaagagatattaaggaaaagtaattgttgc
ttccttttatttttgttgttagagttggcattctgttcttgtggctgtct
tctttttggtttgttgagggattactttcttgcttgctctagggcatgat
ttccttccttgtattttttttttttctgtttttatcctttaaagggctgg
attcgtggaaagataatgtgtgaatttggttttgtcatggaatattttgg
tttctccatctatggtaattgagagtttggccagtatattagtcttggct
ggcatctgtgtctcttgtgtctatatacatctgtccagtctcttctgtct
ttcatagtgtctggtgaaaagtctggtgtattttgaatagctgccttaat
atgtacttgaactctcttactgcttttaatatttctattctttaataggc
atttgtgtgttctgattaatatggtg
gaattcaacatgattttaatgattaatattctgttttaacttttcttgaa
tgcactttcataaggctttctacaaattaaatccaagaaatgtaatccac
agagcttcttcaatataaggatcgggggaaattaggggacgtaacatgtg
caaacgatcaatgctttaagggcattaagtctgtcattacattgtaccaa
taacagcatgtaagaagctatgagttcctcacatagtaacagtttctcag
tcaatgtggtcactcttccattactcttcctaggctgcatcaaatgacta
ttttccaagttagcatcctcagcacaaaactaagtgttgcattcaagtac
agagaacacctggaaatactcacattagtgccatttcttagatcagacaa
gactattcactgcaaaagcaaatttcacctgttttatttttaacctaggt
ttttaagccaaagattatttttgtatgaatttcttacttgattttctgtt
gctaacctgacattctctcttttttctgtaatcattccctacacaagtga
gcaaccactaaacaagaggaaaaggaacatgataaaattagaatagattt
catagctgcagagagagttctgtgattttatttatttgaagactcattta
ttggccattttgtctctttaatttgcaacaatcaccatttgttcattcac
cccttccaagccttacctagagttaagctatgaagtcttccaacttgatc
aataccatctttaaaatgactatgtatcatccaccctcactctgtagaaa
aatcagtaaatgtgatattattttgaaattaattaaaatttaattttatt
ctcatttctgtgtcaataataattactttcaccaccatgaaaactttaat
ttatttatctatcccccggtagacagtttctaatagtatgctactttggg
caatattgcaataaaccatatttattccttatggtatttttatattagta
tacatgatatatcccaggaaaggacttttaagaatttagaaaagaacatg
attccaaataattaatctaaatcatgagaagacccaaagtgatgaagaag
aaggaatatttgttcctctgacgagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36542074_36543178
seq2: B6Ng01-183M19.g_65_1191 (reverse)

seq1  GACTCGTCAGA-GAACATATAT--CCTCTTCTTCATCACTTT-GGTC-TC  45
      ||||||||||| ||||| ||||  | |||||||||||||||| |||| ||
seq2  GACTCGTCAGAGGAACAAATATTCCTTCTTCTTCATCACTTTGGGTCTTC  50

seq1  TCATGATTT-GAT--ATTATTTGAAATCATGT--CTTTCT-AATTCTTTA  89
      ||||||||| |||  |||||||| ||||||||   ||||| ||||||| |
seq2  TCATGATTTAGATTAATTATTTGGAATCATGTTCTTTTCTAAATTCTTAA  100

seq1  AAGTCCTTTC--TGGATATATCATGTATACT-ATAT-AAAATACCATAA-  134
      ||||||||||   |||||||||||||||||| |||| |||||||||||| 
seq2  AAGTCCTTTCCTGGGATATATCATGTATACTAATATAAAAATACCATAAG  150

seq1  GAAT-AATATGGTTTATTGCAATATTGCCCAAAGTAGCATACTATTAGAA  183
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATATGGTTTATTGCAATATTGCCCAAAGTAGCATACTATTAGAA  200

seq1  ACTGTCTACCGGGGGATAGATAAAT-AATTAAAGTTTTCATGGTGGTG-A  231
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  ACTGTCTACCGGGGGATAGATAAATAAATTAAAGTTTTCATGGTGGTGAA  250

seq1  AGTAATTATTATTGACACAGAAATGAGAATAAAATT-AATTTTAATTAAT  280
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTAATTATTATTGACACAGAAATGAGAATAAAATTAAATTTTAATTAAT  300

seq1  TTC-AAATAATATCACATTTACTGATTTTTCTACAGAGTGA-GGTTGATG  328
      ||| ||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  TTCAAAATAATATCACATTTACTGATTTTTCTACAGAGTGAGGGTGGATG  350

seq1  ATACATAGTCATTTTAAAGATGGTATTGATCAAGTTGGAAGACTTCATAG  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGTCATTTTAAAGATGGTATTGATCAAGTTGGAAGACTTCATAG  400

seq1  CTTAACTCTAGGTAAGGCTTGGAAGGGGTGAATGAACAAATGGTGATTGT  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTCTAGGTAAGGCTTGGAAGGGGTGAATGAACAAATGGTGATTGT  450

seq1  TGCAAATTAAAGAGACAAAATGGCCAATAAATGAGTCTTCAAATAAATAA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTAAAGAGACAAAATGGCCAATAAATGAGTCTTCAAATAAATAA  500

seq1  AATCACAGAACTCTCTCTGCAGCTATGAAATCTATTCTAATTTTATCATG  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGAACTCTCTCTGCAGCTATGAAATCTATTCTAATTTTATCATG  550

seq1  TTCCTTTTCCTCTTGTTTAGTGGTTGCTCACTTGTGTAGGGAATGATTAC  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCCTCTTGTTTAGTGGTTGCTCACTTGTGTAGGGAATGATTAC  600

seq1  AGAAAAAAGAGAGAATGTCAGGTTAGCAACAGAAAATCAAGTAAGAAATT  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGAGAGAATGTCAGGTTAGCAACAGAAAATCAAGTAAGAAATT  650

seq1  CATACAAAAATAATCTTTGGCTTAAAAACCTAGGTTAAAAATAAAACAGG  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAAAATAATCTTTGGCTTAAAAACCTAGGTTAAAAATAAAACAGG  700

seq1  TGAAATTTGCTTTTGCAGTGAATAGTCTTGTCTGATCTAAGAAATGGCAC  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTGCTTTTGCAGTGAATAGTCTTGTCTGATCTAAGAAATGGCAC  750

seq1  TAATGTGAGTATTTCCAGGTGTTCTCTGTACTTGAATGCAACACTTAGTT  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAGTATTTCCAGGTGTTCTCTGTACTTGAATGCAACACTTAGTT  800

seq1  TTGTGCTGAGGATGCTAACTTGGAAAATAGTCATTTGATGCAGCCTAGGA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGAGGATGCTAACTTGGAAAATAGTCATTTGATGCAGCCTAGGA  850

seq1  AGAGTAATGGAAGAGTGACCACATTGACTGAGAAACTGTTACTATGTGAG  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAATGGAAGAGTGACCACATTGACTGAGAAACTGTTACTATGTGAG  900

seq1  GAACTCATAGCTTCTTACATGCTGTTATTGGTACAATGTAATGACAGACT  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATAGCTTCTTACATGCTGTTATTGGTACAATGTAATGACAGACT  950

seq1  TAATGCCCTTAAAGCATTGATCGTTTGCACATGTTACGTCCCCTAATTTC  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCCTTAAAGCATTGATCGTTTGCACATGTTACGTCCCCTAATTTC  1000

seq1  CCCCGATCCTTATATTGAAGAAGCTCTGTGGATTACATTTCTTGGATTTA  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGATCCTTATATTGAAGAAGCTCTGTGGATTACATTTCTTGGATTTA  1050

seq1  ATTTGTAGAAAGCCTTATGAAAGTGCATTCAAGAAAAGTTAAAACAGAAT  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGAAAGCCTTATGAAAGTGCATTCAAGAAAAGTTAAAACAGAAT  1100

seq1  ATTAATCATTAAAATCATGTTGAATTC  1105
      |||||||||||||||||||||||||||
seq2  ATTAATCATTAAAATCATGTTGAATTC  1127