BAC Information

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BAC

Clone NameB6Ng01-184G11
Chromosome2 (Build37)
Map Location 40,166,736 - 40,167,889
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps2_560.1, LOC100042604, Magmas-ps
Downstream geneLOC666531, Lrp1b, LOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184G11.bB6Ng01-184G11.g
ACCGA009791GA009792
length1,149816
definitionB6Ng01-184G11.b B6Ng01-184G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagtacttcagagtcaactaaatcaaattcatcatgtatgaa
aaagtaatgttagttttaaagtacagataaaatcaagaagaattcaactt
atatgattacccagatcattaagaggcactaagcaaattaaaatatgtta
aggttgatatatccagagtgataggtggaaacgcaatgtggtaggaagtt
ctgattccatttaattgagcttcacttgtggcaaaataagtgagagtttt
gcccaagacaatagcgtagacatttgtgtactaagagctctctgcataag
gattggtgttatctatatttagcatcagaaaaatttagtctaagttttcc
tatcagtcttgaggtttaaaatatgacagaaacttaaataagttagacaa
aatgaataattgaaaatcatgagcaaaatataattccaatatcaatttcc
ttaatctttcctagaataagcaagccagatatgttactttatctacaaaa
ataataataataataataaaacatggaagagaaacagtgtagatttaaaa
tgcagataccaaaattattggagcaaatgacatcaagtgccacagaggga
agaaatatgttccattttgtgctgaagatagccgaagaattgagtgatgt
taactcacagaaggcctgagattggactgaaatctcaccaaggaccttac
agaatataatcaaagccacctttgctgaagaacagatttaccttcttcaa
tgaatgctcttagagtacctggaatcagaaggaagatgaaactggaaggt
cgccctatgtatttctcagcatcctcacactttccagccttctgttttgc
tcagctaaatcacaaagaaacatgttggactcaaaaaattttacagttca
gtattaaaaaaaaaatagcagaagcacagtaaccaatattcatggtagaa
gtgggaaattaccctatcaaactgaactgaaatatcaggggactcattaa
tagccaaacaattcatccctgtgtgtaactcagctggagcctctgtaaac
tgatgagcagatgagatagcagcacccctcactgcgagtaggcactcatt
ttgtgttattcacaaaatggtgcaaatcatttaattatgattactagtg

gaattcctgatctttccaagacttttatcatgaatgggcattggattttg
ttaaatgctttctcagcatctaacgagatgatcatgtggttttttacttt
gaattggtttatacagtggattacattgattgatttccatatattaaacc
attcctgcatccctgggatgaagcctacttggtcatgatggatgatcact
ttgatgtgttcttggatttggtttgcaaggattttattgagtatttttgc
atcaatactaataagggaaattggtctgaagttctctatctttgttgggt
ctttatgtggtttaggtatcagagtaattgtggcttcttagaatgaattg
ggtagagtaccttctgtttctattttgtggaatagtttgagaagaactgg
aattaggtcttctttgaaggtctgatagaagtctgcactaaacccatctg
gacctgggcttttttttttttttttttttttttttttttggttgggagac
tattagtgactgtttctatcttcttttttttatcattagatattttcttt
atagagatttcaaatgctatcctgaaagttccctataccctccctcttcc
ctgctcccctacccacccactccctcttcttggccctggcattccctgtt
taggtaattaatttgatcctgatttaactttggtgtgtggtatctgtcta
gaaatttgtccttttcacccaggttttccagttttttcattgtagccttt
tgtaaaacaatctgatggtgttttgtattttctcaggatcttttgttatg
ttccccttttgatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40166736_40167889
seq2: B6Ng01-184G11.b_44_1192

seq1  GAATTCAAAAGTACTTCAGAGTCAACTAAATCAAATTCATCATGTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGTACTTCAGAGTCAACTAAATCAAATTCATCATGTATGAA  50

seq1  AAAGTAATGTTAGTTTTAAAGTACAGATAAAATCAAGAAGAATTCAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATGTTAGTTTTAAAGTACAGATAAAATCAAGAAGAATTCAACTT  100

seq1  ATATGATTACCCAGATCATTAAGAGGCACTAAGCAAATTAAAATATGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTACCCAGATCATTAAGAGGCACTAAGCAAATTAAAATATGTTA  150

seq1  AGGTTGATATATCCAGAGTGATAGGTGGAAACGCAATGTGGTAGGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGATATATCCAGAGTGATAGGTGGAAACGCAATGTGGTAGGAAGTT  200

seq1  CTGATTCCATTTAATTGAGCTTCACTTGTGGCAAAATAAGTGAGAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCATTTAATTGAGCTTCACTTGTGGCAAAATAAGTGAGAGTTTT  250

seq1  GCCCAAGACAATAGCGTAGACATTTGTGTACTAAGAGCTCTCTGCATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGACAATAGCGTAGACATTTGTGTACTAAGAGCTCTCTGCATAAG  300

seq1  GATTGGTGTTATCTATATTTAGCATCAGAAAAATTTAGTCTAAGTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTGTTATCTATATTTAGCATCAGAAAAATTTAGTCTAAGTTTTCC  350

seq1  TATCAGTCTTGAGGTTTAAAATATGACAGAAACTTAAATAAGTTAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTCTTGAGGTTTAAAATATGACAGAAACTTAAATAAGTTAGACAA  400

seq1  AATGAATAATTGAAAATCATGAGCAAAATATAATTCCAATATCAATTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAATTGAAAATCATGAGCAAAATATAATTCCAATATCAATTTCC  450

seq1  TTAATCTTTCCTAGAATAAGCAAGCCAGATATGTTACTTTATCTACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTTCCTAGAATAAGCAAGCCAGATATGTTACTTTATCTACAAAA  500

seq1  ATAATAATAATAATAATAAAACATGGAAGAGAAACAGTGTAGATTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAAAACATGGAAGAGAAACAGTGTAGATTTAAAA  550

seq1  TGCAGATACCAAAATTATTGGAGCAAATGACATCAAGTGCCACAGAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATACCAAAATTATTGGAGCAAATGACATCAAGTGCCACAGAGGGA  600

seq1  AGAAATATGTTCCATTTTGTGCTGAAGATAGCCGAAGAATTGAGTGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATGTTCCATTTTGTGCTGAAGATAGCCGAAGAATTGAGTGATGT  650

seq1  TAACTCACAGAAGGCCTGAGATTGGACTGAAATCTCACCAAGGACCTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCACAGAAGGCCTGAGATTGGACTGAAATCTCACCAAGGACCTTAC  700

seq1  AGAATATAATCAAAGCCACCTTTGCTGAAGAACAGATTTACCTTCTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAATCAAAGCCACCTTTGCTGAAGAACAGATTTACCTTCTTCAA  750

seq1  TGAATGCTCTTAGAGTACCTGGAATCAGAAGGAAGATGAAACTGGAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTCTTAGAGTACCTGGAATCAGAAGGAAGATGAAACTGGAAGGT  800

seq1  CGCCCTATGTATTTCTCAGCATCCTCACACTTTCCAGCCTTCTGTTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTATGTATTTCTCAGCATCCTCACACTTTCCAGCCTTCTGTTTTGC  850

seq1  TCAGCTAAATCACAAAGAAACATGTTGGACTCAAAAAATTTTACAGTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTAAATCACAAAGAAACATGTTGGACTCAAAAAATTTTACAGTTCA  900

seq1  GGTATTAAAAAAAAAATAGCAGGAAGCACAGTAACCAATATTCATGGTAG  950
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  -GTATTAAAAAAAAAATAGCA-GAAGCACAGTAACCAATATTCATGGTAG  948

seq1  AAGGTGGGAAATTACCCTATCAAACTGAACTGAAATATCAGGGGACTCAT  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-GTGGGAAATTACCCTATCAAACTGAACTGAAATATCAGGGGACTCAT  997

seq1  TAATAGCCAAACAATTCATCCCTGTGGTGTAACTCAGCTGGAGCCTCTGT  1050
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAATAGCCAAACAATTCATCCCTGT-GTGTAACTCAGCTGGAGCCTCTGT  1046

seq1  AAACTGATGAGCAGATGAAGATAGCAGCA-CCCTCACTGCGAGTAGGGCA  1099
      ||||||||||||||||| ||||||||||| ||||||||||||||| ||||
seq2  AAACTGATGAGCAGATG-AGATAGCAGCACCCCTCACTGCGAGTA-GGCA  1094

seq1  CTCATTTTGTG-TATTCACAAAAT-GTGCAAAATCAATTAATTAATGATT  1147
      ||||||||||| |||||||||||| |||| |||||| |||||| ||||||
seq2  CTCATTTTGTGTTATTCACAAAATGGTGC-AAATCATTTAATT-ATGATT  1142

seq1  ACTAGTG  1154
      |||||||
seq2  ACTAGTG  1149


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