BAC Information

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BAC

Clone NameB6Ng01-186B08
Chromosome2 (Build37)
Map Location 57,563,278 - 57,564,407
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
Downstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186B08.bB6Ng01-186B08.g
ACCGA011022GA011023
length1,1251,081
definitionB6Ng01-186B08.b B6Ng01-186B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcaatggtattctaataaagatggttgtaaaaacgtaggtct
atggcctgaggaaggaaacatggtcatgtgtggaatgaatgagtatgaga
tatgtgggcttatcacaggaatctccaacttatctgaaatgcgcttatgc
aaaacttgtaatgttcaacagagttagcagaaatcactacaactattttc
tcagagaggagaatgaaattcaaatattaattcttgagcagaatgtcaaa
tactaggatctattatttcatggaatatcagtaagtacagaggaacatac
ttatttcatcttgtaaacacattttttggaagagattttctgtgggtaaa
tctacatgtcaggatgctctacgaaaatgatcagggacaggtcaggttat
aaaggcaagttcttgacatcacctaaataagatcattccagatggttaat
atttagatgatacaacattcttgactctatttgactcagatgatacagct
tctggagtcagattaatttagcttttgtgtactttgaagtcataccctag
gtcacctcaaactgatccctgtatactgagaatatcatcttaacattttc
agtgacttggaatcatttctattttttttcaccttgttgctgagttctta
ataatgcatcatacaaataaatgcagatgatagtttctcagagaagaaca
atgtatttgatagtaagctagaagggttggtcttcatagtagttatgttt
ccaacatgtgttgttagatattttatataatattgtgtactgaaacaaaa
gtaggcttagagactcatatccaagcttgaaagaaattcagatctttcca
agattaaaaactgataatattaacagtcctcctgagaactcagttttcca
agactgcttttcatattaaaatgaattggatgtttgtaaagtaatagcaa
catggtaaggtctcagaactgtcactatagctgggaaaggaagtcagcct
ataaatgaggggggatttatgccagattagctcccacaccagcacaaatg
taatactgagactgaactgctattcaagctagccttatcagcagcttcca
gatcaggtaaagatcctgcttataa
gaattcagtttgcagtattttattgagtatttttgcatcagtgttcataa
aagaaattgatctgaaattctctttctttgttgagtcctgtgtggtttag
gtatggcagtgactgtggcctcatagaatgagtttgatgtagtttgagga
atattggtattagctcttctctgaaagtctggtagaattctgtgctaaaa
tcacctggtcctgcctttttgtttgttttgttttgttttgtttgggaaat
atttaattattgcttttgttttcttgggggttataggactgtttaaataa
ccctgatcttgatttaactttgctaagtagtatctgtgaagaaaatcatc
catttatttagattttccagttttgtggagtacaggcttgtgaagtatga
cctaatgattctctgaatttcttcattgtcccttcttatgcctacctttt
cacttctgattttgtatatttggatactgtctttctgtcttttgtttttg
aataagtgagcacagtgtttatagtatgacctaagcactcaggaggtttc
aggtctttaaaatcaggtcaggtagtattagctgatcagagaactgggct
cagaaaggttatatgacttgagtatagctacctacttttgtgaaaaatat
tgtaataatgtgtgcatatatttgtttagtcccatagtctgggatcttaa
ctactattcttgtattgtttttgcttctctggagatacattatcctgctc
tgaaaaaaacataaaagctgggtactttctaactcaccaagatagacagt
tgcatggtagcagagagagacatagcctacgtgaatagtgtacttttgac
ttgagcagtctgcataaagacattcataagtatcttcgaacatcaaggct
atgattatttaacaacattgtcttgattttctgtgtaagttttaacataa
agtttgtttgtcttcatactttcagctatttatggatttgatggagaaaa
ataggaatcatataaaataaaatttttatttaccgcttgaagattcaccc
tgggataggaactcttaaatggagaagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57563278_57564407
seq2: B6Ng01-186B08.b_44_1168

seq1  GAATTCAGGCAATGGTATTCTAATAAAGATGGTTGTAAAAACGTAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAATGGTATTCTAATAAAGATGGTTGTAAAAACGTAGGTCT  50

seq1  ATGGCCTGAGGAAGGAAACATGGTCATGTGTGGAATGAATGAGTATGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTGAGGAAGGAAACATGGTCATGTGTGGAATGAATGAGTATGAGA  100

seq1  TATGTGGGCTTATCACAGGAATCTCCAACTTATCTGAAATGCGCTTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGGCTTATCACAGGAATCTCCAACTTATCTGAAATGCGCTTATGC  150

seq1  AAAACTTGTAATGTTCAACAGAGTTAGCAGAAATCACTACAACTATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGTAATGTTCAACAGAGTTAGCAGAAATCACTACAACTATTTTC  200

seq1  TCAGAGAGGAGAATGAAATTCAAATATTAATTCTTGAGCAGAATGTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGGAGAATGAAATTCAAATATTAATTCTTGAGCAGAATGTCAAA  250

seq1  TACTAGGATCTATTATTTCATGGAATATCAGTAAGTACAGAGGAACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGATCTATTATTTCATGGAATATCAGTAAGTACAGAGGAACATAC  300

seq1  TTATTTCATCTTGTAAACACATTTTTTGGAAGAGATTTTCTGTGGGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATCTTGTAAACACATTTTTTGGAAGAGATTTTCTGTGGGTAAA  350

seq1  TCTACATGTCAGGATGCTCTACGAAAATGATCAGGGACAGGTCAGGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGTCAGGATGCTCTACGAAAATGATCAGGGACAGGTCAGGTTAT  400

seq1  AAAGGCAAGTTCTTGACATCACCTAAATAAGATCATTCCAGATGGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGTTCTTGACATCACCTAAATAAGATCATTCCAGATGGTTAAT  450

seq1  ATTTAGATGATACAACATTCTTGACTCTATTTGACTCAGATGATACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATGATACAACATTCTTGACTCTATTTGACTCAGATGATACAGCT  500

seq1  TCTGGAGTCAGATTAATTTAGCTTTTGTGTACTTTGAAGTCATACCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCAGATTAATTTAGCTTTTGTGTACTTTGAAGTCATACCCTAG  550

seq1  GTCACCTCAAACTGATCCCTGTATACTGAGAATATCATCTTAACATTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCAAACTGATCCCTGTATACTGAGAATATCATCTTAACATTTTC  600

seq1  AGTGACTTGGAATCATTTCTATTTTTTTTCACCTTGTTGCTGAGTTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTTGGAATCATTTCTATTTTTTTTCACCTTGTTGCTGAGTTCTTA  650

seq1  ATAATGCATCATACAAATAAATGCAGATGATAGTTTCTCAGAGAAGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCATCATACAAATAAATGCAGATGATAGTTTCTCAGAGAAGAACA  700

seq1  ATGTATTTGATAGTAAGCTAGAAGGGTTGGTCTTCATAGTAGTTATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGATAGTAAGCTAGAAGGGTTGGTCTTCATAGTAGTTATGTTT  750

seq1  CCAACATGTGTTGTTAGATATTTTATATAATATTGTGTACTGAAACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATGTGTTGTTAGATATTTTATATAATATTGTGTACTGAAACAAAA  800

seq1  GTAGGCTTAGAGACTCATATCCAAGCTTGAAAGAAATTCAGATCTTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTTAGAGACTCATATCCAAGCTTGAAAGAAATTCAGATCTTTCCA  850

seq1  AGATTAAAAACTGATAATATTAACAGTCCTCCTGAGAACTCAGTTTTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAACTGATAATATTAACAGTCCTCCTGAGAACTCAGTTTTCCA  900

seq1  AGACTGCTTTTCATATTAAAATGAATTGGATGTTTGTAAAGTAATAGCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCTTTTCATATTAAAATGAATTGGATGTTTGTAAAGTAATAGCAA  950

seq1  CATGGTAAGGTCTCAGAACTGTCACTATAGCT-GGAAAGGAAGTTCAGCC  999
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  CATGGTAAGGTCTCAGAACTGTCACTATAGCTGGGAAAGGAAG-TCAGCC  999

seq1  TATAAATGAGGGGGGAATTTAATGCCCAGATTAGCTCCCACACCAGGCAC  1049
      ||||||||||||||||  || ||| |||||||||||||||||||| ||||
seq2  TATAAATGAGGGGGGA--TTTATG-CCAGATTAGCTCCCACACCA-GCAC  1045

seq1  AAATGTATTACTGAGACTTGACTGCTA-TCAAGCTTAGCCTAATCAGCAG  1098
      ||||||| ||||||||||  ||||||| |||||| |||||| ||||||||
seq2  AAATGTAATACTGAGACTGAACTGCTATTCAAGC-TAGCCTTATCAGCAG  1094

seq1  GCTCCAGATCAGGGAAAGATCCTGTCTTATAA  1130
        ||||||||||| |||||||||| |||||||
seq2  CTTCCAGATCAGGTAAAGATCCTG-CTTATAA  1125