BAC Information

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BAC

Clone NameB6Ng01-190B08
Chromosome2 (Build37)
Map Location 47,811,762 - 47,812,986
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l, LOC100041508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190B08.bB6Ng01-190B08.g
ACCGA013929GA013930
length1,2261,193
definitionB6Ng01-190B08.b B6Ng01-190B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaggttctcacttgtctcttaaaaatgcatttgttgtttaaa
taggtttgaaataactttcaaacagtacaatatgaacacctttaaatttt
cctgtctagttaaagtcaaatattcatactcacgcacacacacacacaca
cacacacgcacacacatacacacttttcctttgtctttttggattcaggt
tacacttcctgcagctcttggccctgttgggggtacattacattttggct
tgttcataggcgattgctagaaataatttttggtttgttttagaaaaaaa
tacactattgtttctaaatgatttcattttgtgaaaagaacagaatacaa
agaatgattatctggctctttccagtgtaagtgatatggaaatacaaacc
tgaactcagcatgttttctttatcaaatttaatttcaaagaatgacatat
aacattttaggacagccaaaggtttgacattttgaacaaacaaatcaaca
cgagcaatgagcatgtaattttagaaaggagtatagttctgtctggctgc
cctgtagcagctggtcactgtagaccacgaagttcttcagtagcttgatt
tctccatgtgttgagcctcttagagttaaaggctataatctggggctttg
aaaaatgtgctggcaaatttttactgctacgaatgttaaaacacacatgt
aagtattttataagtaatagataacctatagcaattcgtttactatatct
gaaccatccaggcagaaaggatagtgtcttgggacatacaagctgagaac
agttctctcttatttccctaaaagaaaagaagggcatgaaccttctggat
gaggaagattgtggaatctagaggctatcacatttatgaaaagtatattg
agcatgtagtaaaattacacatttggtagctgctatttcacagtgttaat
atacagcagcaaggataaaatctacagcttcacagtgagaagtgaaaatc
ccttttgacttgatctatggtataaatagtacttcccatggtattctttc
aatggtgatttctaatggcatgcatgttgtatgtctttgaatgtattgaa
tatcttcctatacacttcaccctctaaatccacatcttccgctgtaataa
ctaataccttggatagaaccttttagtggaatgctacttacaactgtgtc
tttacatcgtcaaggttatataggga
gaattctcacctgagtaataccaaatggctgagaagcacctgaataaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacaccctgag
attccgtctcacaccagtcagaatggctaagatcaaaaattcaggtgcca
gcagatgctggcaaggatgtggagaaaggggaacactcctccattgttgg
tgggattgcatgtttgtacaagcactctggaaatcagtctgatcgttcct
cacaaaattggacatagtactattggaggatcctgcaatacctctcctgg
acacatatccagaagatgttccaacgggtaataaggccacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaagaatgaatttatgaaatttccaggc
aaatggttggacctggagggcatcatcctgagtgaggtaacacaatcaca
aaagaattcaaatgatatatactcactgataagttgatattagcccacaa
acttagtatacccgagatataaggtacaatttgcaaaacacatgaaactg
aagaagaatgaaaaccaaagtgtggacactttgccccttcttagaaatgg
gaaaaaacacccatgcaaggagttacagagacaaagtttgaagttgagtc
aaaaggatggaccatctagagactgccatatccagggatccattccataa
tcagcctccaaaagatgacaccattgcatacactagtaagattttgctga
aatgaccctgatatagcagtctcttgtgagactatcccggggtctagcaa
acacataagtggatgctcacagtcagctattggatggatcacagggcccc
attgtaggagctggagaatgtatccaggatctaaagggtctgcaacccta
taggtgaacacattatgactaaccagtaccccagagcttttgactctagc
tgcaaatgtatcaaagatggcctattcgtcatcactgaagagaaggccat
gaacttgcaactttattattgcccagtacagaatgccagtacaaatggaa
tgggtgcttagattagaagtgtggggccaagtatcttccgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_47811762_47812986
seq2: B6Ng01-190B08.b_46_1271 (reverse)

seq1  TCCCT-TATAACCT----GCAGTAAAG--ACAGTTGTAAGTAGCATTTCC  43
      ||||| ||||||||    |  ||||||  |||||||||||||||| ||||
seq2  TCCCTATATAACCTTGACGATGTAAAGACACAGTTGTAAGTAGCA-TTCC  49

seq1  ACAAAAAGTGTCTATCCCAAGTA-TAGTTATTTACCAGCGGAAAGGATGT  92
      || |||||  ||||||| | ||| ||||||||   ||||||||  |||||
seq2  ACTAAAAGGTTCTATCCAAGGTATTAGTTATT--ACAGCGGAA--GATGT  95

seq1  G--ATTAGA-GGTGAAGTTGTAATAAGGAAAGATA-TCAATACATTCAAA  138
      |   ||||| ||||||| ||| |||  | |||||| ||||||||||||||
seq2  GGATTTAGAGGGTGAAG-TGT-ATA--GGAAGATATTCAATACATTCAAA  141

seq1  GAACATAC-ACATGCAATGCCA-TAGAAATCACCATTGAAAGAATACCAT  186
      | |||||| |||||| |||||| |||||||||||||||||||||||||||
seq2  G-ACATACAACATGC-ATGCCATTAGAAATCACCATTGAAAGAATACCAT  189

seq1  GGGAAGTACTATTTATACCATAGATCAAGTCAAAAGGGATTTTTCACTTC  236
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGAAGTACTATTTATACCATAGATCAAGTCAAAAGGGA-TTTTCACTTC  238

seq1  TCACTGTGAAGCTTGTAGATTTTATCCTTGCTGCTGTATATTAACACTGT  286
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGAAGC-TGTAGATTTTATCCTTGCTGCTGTATATTAACACTGT  287

seq1  GAAATAGCAGCTACCAAATGTGTAATTTTACTACATGCTCAATATACTTT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCAGCTACCAAATGTGTAATTTTACTACATGCTCAATATACTTT  337

seq1  TCATAAATGTGATAGCCTCTAGATTCCACAATCTTCCTCATCCAGAAGGT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATGTGATAGCCTCTAGATTCCACAATCTTCCTCATCCAGAAGGT  387

seq1  TCATGCCCTTCTTTTCTTTTAGGGAAATAAGAGAGAACTGTTCTCAGCTT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCCTTCTTTTCTTTTAGGGAAATAAGAGAGAACTGTTCTCAGCTT  437

seq1  GTATGTCCCAAGACACTATCCTTTCTGCCTGGATGGTTCAGATATAGTAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCCCAAGACACTATCCTTTCTGCCTGGATGGTTCAGATATAGTAA  487

seq1  ACGAATTGCTATAGGTTATCTATTACTTATAAAATACTTACATGTGTGTT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTGCTATAGGTTATCTATTACTTATAAAATACTTACATGTGTGTT  537

seq1  TTAACATTCGTAGCAGTAAAAATTTGCCAGCACATTTTTCAAAGCCCCAG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTCGTAGCAGTAAAAATTTGCCAGCACATTTTTCAAAGCCCCAG  587

seq1  ATTATAGCCTTTAACTCTAAGAGGCTCAACACATGGAGAAATCAAGCTAC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGCCTTTAACTCTAAGAGGCTCAACACATGGAGAAATCAAGCTAC  637

seq1  TGAAGAACTTCGTGGTCTACAGTGACCAGCTGCTACAGGGCAGCCAGACA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACTTCGTGGTCTACAGTGACCAGCTGCTACAGGGCAGCCAGACA  687

seq1  GAACTATACTCCTTTCTAAAATTACATGCTCATTGCTCGTGTTGATTTGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATACTCCTTTCTAAAATTACATGCTCATTGCTCGTGTTGATTTGT  737

seq1  TTGTTCAAAATGTCAAACCTTTGGCTGTCCTAAAATGTTATATGTCATTC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAAAATGTCAAACCTTTGGCTGTCCTAAAATGTTATATGTCATTC  787

seq1  TTTGAAATTAAATTTGATAAAGAAAACATGCTGAGTTCAGGTTTGTATTT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTAAATTTGATAAAGAAAACATGCTGAGTTCAGGTTTGTATTT  837

seq1  CCATATCACTTACACTGGAAAGAGCCAGATAATCATTCTTTGTATTCTGT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCACTTACACTGGAAAGAGCCAGATAATCATTCTTTGTATTCTGT  887

seq1  TCTTTTCACAAAATGAAATCATTTAGAAACAATAGTGTATTTTTTTCTAA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCACAAAATGAAATCATTTAGAAACAATAGTGTATTTTTTTCTAA  937

seq1  AACAAACCAAAAATTATTTCTAGCAATCGCCTATGAACAAGCCAAAATGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAAAAATTATTTCTAGCAATCGCCTATGAACAAGCCAAAATGT  987

seq1  AATGTACCCCCAACAGGGCCAAGAGCTGCAGGAAGTGTAACCTGAATCCA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCCCCAACAGGGCCAAGAGCTGCAGGAAGTGTAACCTGAATCCA  1037

seq1  AAAAGACAAAGGAAAAGTGTGTATGTGTGTGCGTGTGTGTGTGTGTGTGT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAAAGGAAAAGTGTGTATGTGTGTGCGTGTGTGTGTGTGTGTGT  1087

seq1  GTGTGCGTGAGTATGAATATTTGACTTTAACTAGACAGGAAAATTTAAAG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTGAGTATGAATATTTGACTTTAACTAGACAGGAAAATTTAAAG  1137

seq1  GTGTTCATATTGTACTGTTTGAAAGTTATTTCAAACCTATTTAAACAACA  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATATTGTACTGTTTGAAAGTTATTTCAAACCTATTTAAACAACA  1187

seq1  AATGCATTTTTAAGAGACAAGTGAGAACCTGTTGAATTC  1225
      |||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTTTAAGAGACAAGTGAGAACCTGTTGAATTC  1226