BAC Information

Click to search

BAC

Clone NameB6Ng01-191K12
Chromosome2 (Build37)
Map Location 55,771,112 - 55,772,238
singlet/doubletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K12.bB6Ng01-191K12.g
ACCGA015093GA015094
length1,1291,033
definitionB6Ng01-191K12.b B6Ng01-191K12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatacagacaattacacatacatgcataataataataataata
ataataataataataataataaaataatctaaacaagaaaagctaaaaaa
atgcatttctaatatattcttgtctcctgatgaaagtttgtaaatggata
catacatcaatcaatcttttaaaaatatcttatatccctgtggtatcatt
acattattgttattaacatcagtaatagcaagctagcactttatgacaat
ccaatgtgtagacagtgttctaatttaattgtcttgtacacattttaata
tttactttcctagtcatgacataaatagtcctcctgaaatgctgctggac
gtgtagaggtagcacaaagtacacacagacacacatataaatcataacat
aaacaaaatatcaaaatttaatgagtgcattgtctgcatttatgataaac
tgcttttattgtcatgtttcccataataaattcataccatacaatataga
aaaagttagaactaaattgtgatttaattaaatgttataattgcctaaat
ttatacatataagcaaaaatgtaaaattaagaatatcgaacaagaggttt
aatgatataaattactatttagattatacaaggataatcgtaatttgttc
aaggaattctatattcataatcatgtactttatccaagcagtacttcaaa
tgatggtacaatttatgtacattgaaatgtataattaaggtattaaatca
taaaatattaaagcagtaggctgaacattttaagctatttggacatcaaa
tggatatatgaatgtgctaaaccagtgggaaagattaggaggtacaaata
aaggcaagtgctagttctggtagacattctctgaactgaccaggaagagc
atgagcagcaacagacagtaagaaccaaaggattcctttgccatttaata
cccctaatttgtgctggaactcaacagcgttaaaatagtttttaatagaa
gtgctgatacacaggaaaggcatactgaactaggaccctctgccaaacac
atgactgacttccatttatttgaaattacaaactgaaccactttactgat
tttaacatggtgctaataaatccctagat

gaattcatgaaattcttaggcaaatggatggagctataaaatattctgag
ttaggtaacccaatcacataagaacacacatgatattcactcactgacaa
gtggatattagcccaaaagttcatgatacatatgatacagctctcagacc
atgtgaaactcaagaagaaggaagaccaaaatatggatgcttcagtccta
ctttgaagggtgaacaaaataatcatgggtggtagaaagtaagagagact
tgggaaaagagagtagtggggagaggaaaaaagtagggagcaggatcagg
tgtgggaggagacaaactaatgtacagagggtcagggaattgaccagagg
tacacagaatggagagtggggaactggggatagccaccagaaattcctag
atgcaaggaaatcaagagtatcccaggaccaacatggatgacattagctg
aaataccgaagaaaggggagagagaacctgtagagaacatactatggaga
ggttagacatgaaccctggttgagggagaagacacccacctactcaaaag
ttctaacacagaatttctgatgtcaaaaggaaatacagggacaaataata
gagcagagctgaaggggtttgcaaccacatagtaagaacaactgtatcaa
ccaaccagacccctcagagttcccagggactaaatcaccaaccaaaaaag
tatacatggagctacacatggctccagctgcatatatagcacaggatggc
cttgttggacatcaatgagaggagagacccttggtcctgtaaaggcttga
tgttccagtgtaggggaatgccagggcagagaggcaggagtgggttggtg
ggtggggtagcacctttatagaagcatggggaaagagggatagattttgg
gatttcaggaagggaaatcaggaaagacagagggataaatttgaaatgta
aatgaataaatatgcattaaaataaactggagcagaactgaggaaaggcc
atccgaaactgccccacctggggatcattccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55771112_55772238
seq2: B6Ng01-191K12.b_41_1169

seq1  GAATTCACATACAGACAATTACACATACATGCATAATAATAATAATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATACAGACAATTACACATACATGCATAATAATAATAATAATA  50

seq1  ATAATAATAATAATAATAATAAAATAATCTAAACAAGAAAAGCTAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATAATAATAATAAAATAATCTAAACAAGAAAAGCTAAAAAA  100

seq1  ATGCATTTCTAATATATTCTTGTCTCCTGATGAAAGTTTGTAAATGGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTCTAATATATTCTTGTCTCCTGATGAAAGTTTGTAAATGGATA  150

seq1  CATACATCAATCAATCTTTTAAAAATATCTTATATCCCTGTGGTATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATCAATCAATCTTTTAAAAATATCTTATATCCCTGTGGTATCATT  200

seq1  ACATTATTGTTATTAACATCAGTAATAGCAAGCTAGCACTTTATGACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTGTTATTAACATCAGTAATAGCAAGCTAGCACTTTATGACAAT  250

seq1  CCAATGTGTAGACAGTGTTCTAATTTAATTGTCTTGTACACATTTTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTGTAGACAGTGTTCTAATTTAATTGTCTTGTACACATTTTAATA  300

seq1  TTTACTTTCCTAGTCATGACATAAATAGTCCTCCTGAAATGCTGCTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTCCTAGTCATGACATAAATAGTCCTCCTGAAATGCTGCTGGAC  350

seq1  GTGTAGAGGTAGCACAAAGTACACACAGACACACATATAAATCATAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGGTAGCACAAAGTACACACAGACACACATATAAATCATAACAT  400

seq1  AAACAAAATATCAAAATTTAATGAGTGCATTGTCTGCATTTATGATAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATATCAAAATTTAATGAGTGCATTGTCTGCATTTATGATAAAC  450

seq1  TGCTTTTATTGTCATGTTTCCCATAATAAATTCATACCATACAATATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTGTCATGTTTCCCATAATAAATTCATACCATACAATATAGA  500

seq1  AAAAGTTAGAACTAAATTGTGATTTAATTAAATGTTATAATTGCCTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAGAACTAAATTGTGATTTAATTAAATGTTATAATTGCCTAAAT  550

seq1  TTATACATATAAGCAAAAATGTAAAATTAAGAATATCGAACAAGAGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATATAAGCAAAAATGTAAAATTAAGAATATCGAACAAGAGGTTT  600

seq1  AATGATATAAATTACTATTTAGATTATACAAGGATAATCGTAATTTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAAATTACTATTTAGATTATACAAGGATAATCGTAATTTGTTC  650

seq1  AAGGAATTCTATATTCATAATCATGTACTTTATCCAAGCAGTACTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTCTATATTCATAATCATGTACTTTATCCAAGCAGTACTTCAAA  700

seq1  TGATGGTACAATTTATGTACATTGAAATGTATAATTAAGGTATTAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTACAATTTATGTACATTGAAATGTATAATTAAGGTATTAAATCA  750

seq1  TAAAATATTAAAGCAGTAGGCTGAACATTTTAAGCTATTTGGACATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTAAAGCAGTAGGCTGAACATTTTAAGCTATTTGGACATCAAA  800

seq1  TGGATATATGAATGTGCTAAACCAGTGGGAAAGATTAGGAGGTACAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATATGAATGTGCTAAACCAGTGGGAAAGATTAGGAGGTACAAATA  850

seq1  AAGGCAAGTGCTAGTTCTGGTAGACATTCTCTGAACTGACCAGGAAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGTGCTAGTTCTGGTAGACATTCTCTGAACTGACCAGGAAGAGC  900

seq1  ATGAGCAGCAACAGACAGTAAGAACCAAAGGATTCC-TTGCCATTTAATA  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGAGCAGCAACAGACAGTAAGAACCAAAGGATTCCTTTGCCATTTAATA  950

seq1  CCCCTAATTTGTGCTGGAACTCAACAGCGTTAAAATAGTTTTTAATAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAATTTGTGCTGGAACTCAACAGCGTTAAAATAGTTTTTAATAGAA  1000

seq1  GTGCTGATACACAGG-AAGGCATACTGAACTAGGACCCTCTGCCAAAACA  1048
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  GTGCTGATACACAGGAAAGGCATACTGAACTAGGACCCTCTGCC-AAACA  1049

seq1  CATGACTGACTTCCATTTATTTGAAATTACAAACTGAACCACTTTACTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTGACTTCCATTTATTTGAAATTACAAACTGAACCACTTTACTGA  1099

seq1  TTTTAACAT-GTGCTAATAAATCCCTAGAT  1127
      ||||||||| ||||||||||||||||||||
seq2  TTTTAACATGGTGCTAATAAATCCCTAGAT  1129


| Home | SequenceCutter | Blast | Download |