BAC Information

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BAC

Clone NameB6Ng01-195I02
Chromosome2 (Build37)
Map Location 173,834,541 - 173,835,003
singlet/doubletsinglet
Overlap genenone
Upstream geneRae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912
Downstream geneLOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195I02.bB6Ng01-195I02.g
ACCGA017906GA017907
length970458
definitionB6Ng01-195I02.b B6Ng01-195I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaagaagtttcaatttgcatctccctgatggcaagggatacc
ggacactcttaaagatagcttttgggcgttttttgtttgtttgtctgttt
gatttgtaagctgtttattcagtctattggcccatttgtcaatggttggt
tttatttctttgttacctaatttctgaagtatccccgtgactgatgtata
actggtacatattttcttacattccgtgggccatgggctctgatgattgt
cttagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagt
tgggaaggaaagggtttattcagcttacacttccatactgcggatcatca
cataaggaagtcaggactggaactcaagcaggtcagaaagcaggagctga
tgtagaggccatggaggaatgttctttactggctagcttcccctggcttg
ttcagcctgttctcttatagaactcaagactaccagcccagatatggtcc
cacacacaaggggcctttcccccttgatcactaattgagaaaatgcctta
caattggatctcatggaggcatatccccaactgaagctcctttctctgtg
ataactccagctgtgtcaagctgacacaaaactagccagtacaatgatat
ttttgtttgtttgtttgtttgtttgtttgttgtttgtggggtgcagactc
ttcgaatgctcctgcaatccaatctgctgctgttggggctgcttcctgtg
ctgttgctgccctgctaagaaagttcttatctaccccaaggtctttgaag
aggattcttctgtttttcttgaaggagtcccagggtttccagggtctaag
tttaagctgttgggtctgtttgaatttgatttttgtccaaagtgaaaata
actgaatgggatttccctctttctacctgtagataccaattttcccagaa
ccatttgtaaatggactgtt
tatgatctgttcacagctctccccagcagccagggttccgctctggagcc
cgcacactgacacattgggaatggaagcccacgtttccatttggccgggc
agagaaccatgtctgagctcatcttcccaggagctctgtctcctagcaag
gggaggaggggaagggatctgccccgtgtcaagcacataaagaccattac
tttagagagagcttgctcttcaggggacaagggtctttctttttctatgc
atgtttctctcctccccccccccaatcctgtctgtctttctcaggctcac
ttactctctctctcttgtacatatgtgtatgtgtgcatatgtgtatattg
tgtatatatgtgtatatatataatgtgtttgtttgtgttttataggccag
agaacaaccttgggtacctttcttcagaaacagggtctcaggctggagct
taactaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173834541_173835003
seq2: B6Ng01-195I02.g_66_529

seq1  GAATTCTATGATCTGTTCACAGCTCTCCCCAGCAGCCAGGGTTCCGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATCTGTTCACAGCTCTCCCCAGCAGCCAGGGTTCCGCTCT  50

seq1  GGAGCCCGCACACTGACACATTGGGAATGGAAGCCCACGTTTCCATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCGCACACTGACACATTGGGAATGGAAGCCCACGTTTCCATTTGG  100

seq1  CCGGGCAGAGAACCATGTCTGAGCTCATCTTCCCAGGAGCTCTGTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCAGAGAACCATGTCTGAGCTCATCTTCCCAGGAGCTCTGTCTCCT  150

seq1  AGCAAGGGGAGGAGGGGAAGGGATCTGCCCCGTGTCAAGCACATAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGGGAGGAGGGGAAGGGATCTGCCCCGTGTCAAGCACATAAAGAC  200

seq1  CATTACTTTAGAGAGAGCTTGCTCTTCAGGGGACAAGGGTCTTTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTTAGAGAGAGCTTGCTCTTCAGGGGACAAGGGTCTTTCTTTTT  250

seq1  CTATGCATGTTTCTCTCCTCCCCCCCCCCAATCCTGTCTGTCTTTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCATGTTTCTCTCCTCCCCCCCCCCAATCCTGTCTGTCTTTCTCAG  300

seq1  GCTCACTTACTCTCTCTCTCTTGTACATATGTGTATGTGTGCATATGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTACTCTCTCTCTCTTGTACATATGTGTATGTGTGCATATGTGT  350

seq1  ATATTGTGTATATATGTGTATATATATAATGTGTTTGTTTGTGTTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGTATATATGTGTATATATATAATGTGTTTGTTTGTGTTTTATA  400

seq1  GGCCAGAGAACAACCTTGGGTACC-ATCTTCAGAAACAGGGTCTCAGGCT  449
      ||||||||||||||||||||||||  ||||||||||||||||||||||||
seq2  GGCCAGAGAACAACCTTGGGTACCTTTCTTCAGAAACAGGGTCTCAGGCT  450

seq1  GGAGCTTAACCAGA  463
      |||||||||| |||
seq2  GGAGCTTAACTAGA  464