BAC Information

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BAC

Clone NameB6Ng01-197B05
Chromosome2 (Build37)
Map Location 17,571,189 - 17,719,865
singlet/doubletdoublet
Overlap geneNebl
Upstream genePlxdc2, 4930515L03Rik, LOC383665
Downstream geneLOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10, LOC641254, Dnajc1, LOC100041388, LOC623325, LOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197B05.bB6Ng01-197B05.g
ACCGA019043GA019044
length1,070959
definitionB6Ng01-197B05.b B6Ng01-197B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,571,189 - 17,572,254)(17,719,301 - 17,719,865)
sequence
gaattctggaattattgtgtttggctgacagagagtttcttggcccttct
tcccagtacagatcctgctctcgcccctgtactgcagttatctgtagaaa
ggatacaggagattcgaagcagtccacctgagatattcctgaagtatata
cacagtgctatcatgtagaagccttctctgcagtgtaatcacttagcaaa
ggtcaccagcatccaagagccctctgagaaggcctgtgtgaggtggagaa
aggcactgtgaaagcagagaagacagaggccacgttgctgttgtgtctag
ggctgcaacagatactcaggatctttccgaagccaagatgtccttagtta
ccaaacatcctgtgtgttcccagtcatgactactggcatacctgctacca
taggaaaggtcctggtcttaatgaagagcctgagtcttcaattaccctgt
gtttgggtgctgtggctgcctttccaggcctctgaataaaccagtcactg
agaatccaaaatagacattaattaaatcctgcattcctgagttaggagtc
gccttgagccttccttgtttttctttgcatccttaattgaaccacaaatg
accacgtctgtaaaatataggggtttattgtccgggtgttgaataacact
gcaaccatccaccttcatccattaactgccttccattcatgcctgcttgt
ctccgaagttacatcagaacagctttatggacaagatatacttcatttct
ctcactgcaaatagctgaatagacacgctggagaagcgaaactgagtggc
tgtagccagtacaagagaatgctaagcttagggcaaaaaaaaaaaaaaaa
aagaaacaaaagcctgctacaatttttccctagaaatttgcagaattcca
gagagacttctaggaaatactttaatgagtgaaatgacattgtcttctcc
cctcctggttaacctggcagggaacacaccaggtcaagcacatggaagca
cacattagcacgggggcgagccggctgtcgccagggctggacaggcactt
tcccactgggctggtcatgg
gaattctctgtttagctctatatcccattttcaaattgaattattttgtt
tgttaatgtataatttcttgaaaaattttaatatactttggatattagtc
ctctgttagatatatgtttggtgaagaccttttcccattgtgtaggctgc
tgttttgtcctgttgatggtgtcctttgctttacagaagcttttcagttt
catttagctattctgtttttccatatgaagttgagaattgctctttcaag
gtctgtaaagtgttgagttggaattttgatgggaactgtattgaatctgt
agattgcttttggtaaaaatggccattttcactatgttaaccctccaatc
cgtgagcatgggagatctttacatcttctgaaattttcctcaatttcttt
cttcagagacttgaggttcttgtcatacttgtctttctcttgcttgctta
gagttacaccaagatatttcatattatttgtggctattgtaaaaggtgtt
gtttccctaatttctttctcagcctgtctatggtttatatgaagaaaaac
tactgatttttttttttaaagttaattttgtacccagccactttgcttaa
ggtgtttatcagctatagaagttatcttgtagaattttgggggtccaaag
agagaagcagatagtgtttgaaatctttaataccccagtcacgtacatgg
ccattcaggcagaactgttcttgtatgtatctgggcacacaactggcatt
gtcatggactctggtgacagggtcatgtatacaatgcccatctataagag
ctactcacccttccccacaccatcttgcttctggacctggctgggttggg
acctgatatactatctcatgtaggtgctgactgagcagggctgcagtttt
accaccactgctgagagggagttgtttatgagagaggagtttatgagagg
ggagttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17571189_17572254
seq2: B6Ng01-197B05.b_42_1111

seq1  GAATTCTGGAATTATTGTGTTTGGCTGACAGAGAGTTTCTTGGCCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATTATTGTGTTTGGCTGACAGAGAGTTTCTTGGCCCTTCT  50

seq1  TCCCAGTACAGATCCTGCTCTCGCCCCTGTACTGCAGTTATCTGTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTACAGATCCTGCTCTCGCCCCTGTACTGCAGTTATCTGTAGAAA  100

seq1  GGATACAGGAGATTCGAAGCAGTCCACCTGAGATATTCCTGAAGTATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAGGAGATTCGAAGCAGTCCACCTGAGATATTCCTGAAGTATATA  150

seq1  CACAGTGCTATCATGTAGAAGCCTTCTCTGCAGTGTAATCACTTAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGCTATCATGTAGAAGCCTTCTCTGCAGTGTAATCACTTAGCAAA  200

seq1  GGTCACCAGCATCCAAGAGCCCTCTGAGAAGGCCTGTGTGAGGTGGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCAGCATCCAAGAGCCCTCTGAGAAGGCCTGTGTGAGGTGGAGAA  250

seq1  AGGCACTGTGAAAGCAGAGAAGACAGAGGCCACGTTGCTGTTGTGTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGTGAAAGCAGAGAAGACAGAGGCCACGTTGCTGTTGTGTCTAG  300

seq1  GGCTGCAACAGATACTCAGGATCTTTCCGAAGCCAAGATGTCCTTAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCAACAGATACTCAGGATCTTTCCGAAGCCAAGATGTCCTTAGTTA  350

seq1  CCAAACATCCTGTGTGTTCCCAGTCATGACTACTGGCATACCTGCTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATCCTGTGTGTTCCCAGTCATGACTACTGGCATACCTGCTACCA  400

seq1  TAGGAAAGGTCCTGGTCTTAATGAAGAGCCTGAGTCTTCAATTACCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAGGTCCTGGTCTTAATGAAGAGCCTGAGTCTTCAATTACCCTGT  450

seq1  GTTTGGGTGCTGTGGCTGCCTTTCCAGGCCTCTGAATAAACCAGTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTGCTGTGGCTGCCTTTCCAGGCCTCTGAATAAACCAGTCACTG  500

seq1  AGAATCCAAAATAGACATTAATTAAATCCTGCATTCCTGAGTTAGGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCAAAATAGACATTAATTAAATCCTGCATTCCTGAGTTAGGAGTC  550

seq1  GCCTTGAGCCTTCCTTGTTTTTCTTTGCATCCTTAATTGAACCACAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAGCCTTCCTTGTTTTTCTTTGCATCCTTAATTGAACCACAAATG  600

seq1  ACCACGTCTGTAAAATATAGGGGTTTATTGTCCGGGTGTTGAATAACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGTCTGTAAAATATAGGGGTTTATTGTCCGGGTGTTGAATAACACT  650

seq1  GCAACCATCCACCTTCATCCATTAACTGCCTTCCATTCATGCCTGCTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCATCCACCTTCATCCATTAACTGCCTTCCATTCATGCCTGCTTGT  700

seq1  CTCCGAAGTTACATCAGAACAGCTTTATGGACAAGATATACTTCATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGAAGTTACATCAGAACAGCTTTATGGACAAGATATACTTCATTTCT  750

seq1  CTCACTGCAAATAGCTGAATAGACACGCTGGAGAAGCGAAACTGAGTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCAAATAGCTGAATAGACACGCTGGAGAAGCGAAACTGAGTGGC  800

seq1  TGTAGCCAGTACAAGAGAATGCTAAGGCTTAGGGC-AAAAAAAAAAAAAA  849
      ||||||||||||||||||||||||| ||||||||| ||||||||||||||
seq2  TGTAGCCAGTACAAGAGAATGCTAA-GCTTAGGGCAAAAAAAAAAAAAAA  849

seq1  AAAGAAACAAAAGCCTGCTACAATTTTTCCCTAGAAATTTGCAGAATTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAAAAGCCTGCTACAATTTTTCCCTAGAAATTTGCAGAATTCC  899

seq1  AGAGAGACTTCTAGGAAATAC-TTAATGAGTGAAATGACATTGTCTTCT-  947
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  AGAGAGACTTCTAGGAAATACTTTAATGAGTGAAATGACATTGTCTTCTC  949

seq1  CCCTCCT-GTTAACCTGGCA-GGAACACACCAGTCAAAGCACAGGGAAGC  995
      ||||||| |||||||||||| ||||||||||||   ||||||| ||||||
seq2  CCCTCCTGGTTAACCTGGCAGGGAACACACCAGGTCAAGCACATGGAAGC  999

seq1  ACACATTAGCAC-GGGGCGAGCCGGCTGGTCGCCAGGGCTGGACA-GCAC  1043
      |||||||||||| |||||||||||||| ||||||||||||||||| ||||
seq2  ACACATTAGCACGGGGGCGAGCCGGCT-GTCGCCAGGGCTGGACAGGCAC  1048

seq1  TTTCCCACCTGGCCTGGTCATGG  1066
      ||||||| |||| ||||||||||
seq2  TTTCCCA-CTGGGCTGGTCATGG  1070

seq1: chr2_17719301_17719865
seq2: B6Ng01-197B05.g_462_1026 (reverse)

seq1  AACAACTCCCCTCTCATAAACTCCTCTCTCATAAACAACTCCCCTCTCAG  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACAACTCCCCTCTCATAAACTCCTCTCTCATAAACAACT-CCCTCTCAG  49

seq1  CAGTGGTGGTAAAACTGCAGCCCTGCTCAGTCAGCACCTACATGAGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTGGTAAAACTGCAGCCCTGCTCAGTCAGCACCTACATGAGATAG  99

seq1  TATATCAGGTCCCAA-CCAGCCAGGTCCAGAAGCAAGATGGTGTGGGGAA  149
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TATATCAGGTCCCAACCCAGCCAGGTCCAGAAGCAAGATGGTGTGGGGAA  149

seq1  GGGTGAGTAGCTCTTATAGATGGGCATTGTATACATGACCCTGTCACCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGTAGCTCTTATAGATGGGCATTGTATACATGACCCTGTCACCAG  199

seq1  AGTCCATGACAATGCCAGTTGTGTGCCCAGATACATACAAGAACAGTTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGACAATGCCAGTTGTGTGCCCAGATACATACAAGAACAGTTCT  249

seq1  GCCTGAATGGCCATGTACGTGACTGGGGTATTAAAGATTTCAAACACTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAATGGCCATGTACGTGACTGGGGTATTAAAGATTTCAAACACTAT  299

seq1  CTGCTTCTCTCTTTGGACCCCCAAAATTCTACAAGATAACTTCTATAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTCTCTTTGGACCCCCAAAATTCTACAAGATAACTTCTATAGCT  349

seq1  GATAAACACCTTAAGCAAAGTGGCTGGGTACAAAATTAACTTTAAAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACACCTTAAGCAAAGTGGCTGGGTACAAAATTAACTTTAAAAAAA  399

seq1  AAAATCAGTAGTTTTTCTTCATATAAACCATAGACAGGCTGAGAAAGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGTAGTTTTTCTTCATATAAACCATAGACAGGCTGAGAAAGAAA  449

seq1  TTAGGGAAACAACACCTTTTACAATAGCCACAAATAATATGAAATATCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAAACAACACCTTTTACAATAGCCACAAATAATATGAAATATCTT  499

seq1  GGTGTAACTCTAAGCAAGCAAGAGAAAGACAAGTATGACAAGAACCTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAACTCTAAGCAAGCAAGAGAAAGACAAGTATGACAAGAACCTCAA  549

seq1  GTCTCTGAAGAAAGAA  565
      ||||||||||||||||
seq2  GTCTCTGAAGAAAGAA  565