BAC Information

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BAC

Clone NameB6Ng01-197C02
Chromosome2 (Build37)
Map Location 81,932,229 - 82,057,828
singlet/doubletdoublet
Overlap geneZfp804a
Upstream geneLOC100040704
Downstream geneLOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197C02.bB6Ng01-197C02.g
ACCGA019078GA019079
length1,045558
definitionB6Ng01-197C02.b B6Ng01-197C02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,056,784 - 82,057,828)(81,932,229 - 81,932,786)
sequence
gaattcttaatattatgactgacctaaatgcagccagttttaactcctgg
taagaaacaacaagaccgcagtttctattattttcctgttctgtataaaa
tttagttaaaaatcaaacttttgtttccaaactctaatgcaaccgtaaca
atgcaattcaagctgagttggaattaacattatgagtaagaaacaccatt
ttctagaccatataacaatttctgagtatcccctaggttccaaaacatcc
catgataattagttcatttaacaaaataaaagttttaagtagtatttctc
aagaaagtaaagaccaaatgatgcctaatgatactctgttatactcatag
atcagggccttgctgagccaccatcagggacactttctactataaaagat
gggaacaaattcaaagacccgcagccacgtattatagagagtgagaaaac
ttggaacactcagacttcggggagatgtctctccatcaaatccctctctt
tagggctaggtgaagaggaggtagaaagagtataagagccagagtggata
gaggacatcaagaaaacaaggttctctaaatcaatatgcacaaagatcat
ataagctcaaagagatcaaggcagtatgcatcaggtctatatagttcttt
accaggtcctttgtatgtatattttgacgtccagttgtggtttgttttta
aatgaaatttctggatatgtgaactagtgagtctttgattcttaggcatt
ttcttggcctcatttccttttttgtgtttgttttctccagttctgatgtg
ttagtttttatcatatcatacaatattacattatattcacttagaggcct
atttttttttctaatgaaagacagaaaggaagtccatgcagactatccag
agggtaggcaagtcactacaaaaatacgtgtacattctattatttgaaaa
tggcaacagacatactatagggaaagaaatagatggtattgctagggcta
gttaggtaatgagaggaatattggttattgggattttggggtttt

gaattcaaaactaaaatttagtcttaaaaatacgactgggggaataaaat
ctggagtgaaaataaataaataaataaataaataaataaataaataaaga
caaaaaaactcaatgacttaatgaaattcttaggtaaatggatggaagta
gaaaatatcatcctgagtcaggtaacccaatcacagaaggacacacatgg
tatgcactcactgataagtagatattagcccaaaagcttggaataaccaa
gatacaactcatagaccacatgaagcccaagaagaaggaagaccaaagag
tgggtgcttcagtccttcttagaaggggaaacccacagtaggatatatag
agaaaaagtgtggagcagagactcacataaagaccatccagagactgccc
caccagaggaatctttcccatatacagttaccaaacccagacactattgt
gaatgccaagaagtgcttgctgacgggagtctgatatagctgtctcatga
gaggctctgccagaacctgccaaatacagaggtagatgctcacagccaac
cattgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82056784_82057828
seq2: B6Ng01-197C02.b_44_1088 (reverse)

seq1  AAAACCC--AAATCC--ATAACCAATTATTCCTCTCATTACCTAACTAGC  46
      |||||||  ||||||  |||||||| ||||||||||||||||||||||||
seq2  AAAACCCCAAAATCCCAATAACCAA-TATTCCTCTCATTACCTAACTAGC  49

seq1  CCTAGCAATACCATCTTAATTTCTTTCCCTATAGTATTGTCTGTTGCCAT  96
      ||||||||||||||||  |||||||||||||||||| |||||||||||||
seq2  CCTAGCAATACCATCT--ATTTCTTTCCCTATAGTA-TGTCTGTTGCCAT  96

seq1  TTTCAAATAATAGAATTGTACACGTATTTTTGTAGTGACTTGCCTACCCT  146
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCAAATAATAGAA-TGTACACGTATTTTTGTAGTGACTTGCCTACCCT  145

seq1  CTGGATAGTCTGCATGGACTTCCTTTCTGTCTTTCATTAG-AAAAAAAAT  195
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGGATAGTCTGCATGGACTTCCTTTCTGTCTTTCATTAGAAAAAAAAAT  195

seq1  AGGCCTCTAAGTGAATATAATGTAATATTGTATGATATGATAAAAACTAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCTAAGTGAATATAATGTAATATTGTATGATATGATAAAAACTAA  245

seq1  CACATCAGAACTGGAGAAAACAAACACAAAAAAGGAAATGAGGCCAAGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAGAACTGGAGAAAACAAACACAAAAAAGGAAATGAGGCCAAGAA  295

seq1  AATGCCTAAGAATCAAAGACTCACTAGTTCACATATCCAGAAATTTCATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTAAGAATCAAAGACTCACTAGTTCACATATCCAGAAATTTCATT  345

seq1  TAAAAACAAACCACAACTGGACGTCAAAATATACATACAAAGGACCTGGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAACCACAACTGGACGTCAAAATATACATACAAAGGACCTGGT  395

seq1  AAAGAACTATATAGACCTGATGCATACTGCCTTGATCTCTTTGAGCTTAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTATATAGACCTGATGCATACTGCCTTGATCTCTTTGAGCTTAT  445

seq1  ATGATCTTTGTGCATATTGATTTAGAGAACCTTGTTTTCTTGATGTCCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTTGTGCATATTGATTTAGAGAACCTTGTTTTCTTGATGTCCTC  495

seq1  TATCCACTCTGGCTCTTATACTCTTTCTACCTCCTCTTCACCTAGCCCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTCTGGCTCTTATACTCTTTCTACCTCCTCTTCACCTAGCCCTA  545

seq1  AAGAGAGGGATTTGATGGAGAGACATCTCCCCGAAGTCTGAGTGTTCCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGGATTTGATGGAGAGACATCTCCCCGAAGTCTGAGTGTTCCAA  595

seq1  GTTTTCTCACTCTCTATAATACGTGGCTGCGGGTCTTTGAATTTGTTCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCACTCTCTATAATACGTGGCTGCGGGTCTTTGAATTTGTTCCC  645

seq1  ATCTTTTATAGTAGAAAGTGTCCCTGATGGTGGCTCAGCAAGGCCCTGAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTATAGTAGAAAGTGTCCCTGATGGTGGCTCAGCAAGGCCCTGAT  695

seq1  CTATGAGTATAACAGAGTATCATTAGGCATCATTTGGTCTTTACTTTCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTATAACAGAGTATCATTAGGCATCATTTGGTCTTTACTTTCTT  745

seq1  GAGAAATACTACTTAAAACTTTTATTTTGTTAAATGAACTAATTATCATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATACTACTTAAAACTTTTATTTTGTTAAATGAACTAATTATCATG  795

seq1  GGATGTTTTGGAACCTAGGGGATACTCAGAAATTGTTATATGGTCTAGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTTTGGAACCTAGGGGATACTCAGAAATTGTTATATGGTCTAGAA  845

seq1  AATGGTGTTTCTTACTCATAATGTTAATTCCAACTCAGCTTGAATTGCAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGTTTCTTACTCATAATGTTAATTCCAACTCAGCTTGAATTGCAT  895

seq1  TGTTACGGTTGCATTAGAGTTTGGAAACAAAAGTTTGATTTTTAACTAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACGGTTGCATTAGAGTTTGGAAACAAAAGTTTGATTTTTAACTAAA  945

seq1  TTTTATACAGAACAGGAAAATAATAGAAACTGCGGTCTTGTTGTTTCTTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATACAGAACAGGAAAATAATAGAAACTGCGGTCTTGTTGTTTCTTA  995

seq1  CCAGGAGTTAAAACTGGCTGCATTTAGGTCAGTCATAATATTAAGAATTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGTTAAAACTGGCTGCATTTAGGTCAGTCATAATATTAAGAATTC  1045


seq1: chr2_81932229_81932786
seq2: B6Ng01-197C02.g_63_620

seq1  GAATTCAAAACTAAAATTTAGTCTTAAAAATACGACTGGGGGAATAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACTAAAATTTAGTCTTAAAAATACGACTGGGGGAATAAAAT  50

seq1  CTGGAGTGAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAGA  100

seq1  CAAAAAAACTCAATGACTTAATGAAATTCTTAGGTAAATGGATGGAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAACTCAATGACTTAATGAAATTCTTAGGTAAATGGATGGAAGTA  150

seq1  GAAAATATCATCCTGAGTCAGGTAACCCAATCACAGAAGGACACACATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATCATCCTGAGTCAGGTAACCCAATCACAGAAGGACACACATGG  200

seq1  TATGCACTCACTGATAAGTAGATATTAGCCCAAAAGCTTGGAATAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTCACTGATAAGTAGATATTAGCCCAAAAGCTTGGAATAACCAA  250

seq1  GATACAACTCATAGACCACATGAAGCCCAAGAAGAAGGAAGACCAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACTCATAGACCACATGAAGCCCAAGAAGAAGGAAGACCAAAGAG  300

seq1  TGGGTGCTTCAGTCCTTCTTAGAAGGGGAAACCCACAGTAGGATATATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTTCAGTCCTTCTTAGAAGGGGAAACCCACAGTAGGATATATAG  350

seq1  AGAAAAAGTGTGGAGCAGAGACTCACATAAAGACCATCCAGAGACTGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGTGTGGAGCAGAGACTCACATAAAGACCATCCAGAGACTGCCC  400

seq1  CACCAGAGGAATCTTTCCCATATACAGTTACCAAACCCAGACACTATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGGAATCTTTCCCATATACAGTTACCAAACCCAGACACTATTGT  450

seq1  GAATGCCAAGAAGTGCTTGCTGACGGGAGTCTGATATAGCTGTCTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAAGAAGTGCTTGCTGACGGGAGTCTGATATAGCTGTCTCATGA  500

seq1  GAGGCTCTGCCAGAACCTGCCAAATACAGAGGTAGATGCTCACAGCCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTGCCAGAACCTGCCAAATACAGAGGTAGATGCTCACAGCCAAC  550

seq1  CATTGCAC  558
      ||||||||
seq2  CATTGCAC  558


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