BAC Information

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BAC

Clone NameB6Ng01-199D08
Chromosome2 (Build37)
Map Location 56,217,125 - 56,218,220
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnj3
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199D08.bB6Ng01-199D08.g
ACCGA020601GA020602
length1,1751,092
definitionB6Ng01-199D08.b B6Ng01-199D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttcttcttcagagatttgaagtttttatcatac
agatctttcacctccttagttagagtcacgccagatattttatattattt
gtgactattgagaaaggtgttgtttccctaatttctctcagtctgtttat
tctttgtatagagaacgccattgacttgtttgagtttatttaatatccag
ctactcaccgagctgttatcagcttaggagttccttgtaagaattttaag
ggtcacttaattatactatcaattcatctggcacgtgatatttggacttc
ctcattcccaaatggtatcccctga
gaattcacactgctacactttttatgtgccatccctattaatctttgtaa
cttccatataaatatagatttagaattctgtgattgaattcctagagggg
attttttgtgagacataacagcggaatgtagttgacacacgttctgtgtt
accctagggctacagttttgatcacaagctgagtggattcattgtcaaca
gagaaaatttcatactcatgtcagtggtaaattttacaatgctttttcct
tttaagtacaaatgaaggaaggataaatccagtagtgaactattttagct
acaatctatgaaaataattgcaacaagtaggaacagaagtcaaacctggc
ttgttcaagtctagctatgcagttatatatatttattaattaatagtatt
acccttgacatatatacacttaaacaggaatccattttattgaaaataat
acattgtcattaattgaaaatctgaacaaatgagttctggatttatcaac
tcttccataatattagtaaggaagttgttttttgtttctaagccatataa
atggtgcaactcattatttatcatcttttagtcataaaatattttaagtc
cctgtttcattctatccaagtactagacattcgtaagacagttgctttgg
atttctttaaaaagatacattcttatcataatttccgaggaaggttaaat
ataaattagttataaagccaataagaagataaatgattaggctctgtgat
tatttctaaatttatagtgttttagcactactagtgtttaattaaggaga
aagggagccaattttatttcatgtaattatttaagacctcaaaaattaat
gttctgctccctctgtaatgctgtagttctaaagcaaagctgaggacaac
aaagtcctatttgatagtccagcctttcagccaacagctcttcttcctgg
ctttgatgtggaatggtttatttaatcaattattaatcaaagttatggca
gtcttcttatatatttagtaaaactaaagatgacttttctcatgccttat
gcttaaataaaagtttaatagactgaaaacatttgaccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56217125_56218220
seq2: B6Ng01-199D08.g_62_1153 (reverse)

seq1  TCAAAGTCAAATGTTTTCAGTCTATTTAAACTTTTATTTAAGCAATAAGG  50
      |||| ||||||||||||||||||| |||||||||||||||||| ||||||
seq2  TCAAGGTCAAATGTTTTCAGTCTA-TTAAACTTTTATTTAAGC-ATAAGG  48

seq1  CATGAG-AAAGTCATCTTTTAGTTTTACCTAAATATATAAGAAGACTGCC  99
      |||||| ||||||||| |||||||||| ||||||||||||||||||||||
seq2  CATGAGAAAAGTCATC-TTTAGTTTTA-CTAAATATATAAGAAGACTGCC  96

seq1  ATAACTTTGATTAATAATTGATTAAATAAACCATTCCCACATCAAAGCCA  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATAACTTTGATTAATAATTGATTAAATAAACCATT-CCACATCAAAGCCA  145

seq1  GGAAGAAGAGCTGTTGGCTGAAAGGCTGGACTATCAAATAGGACTTTGTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGAGCTGTTGGCTGAAAGGCTGGACTATCAAATAGGACTTTGTT  195

seq1  GTCCTCAGCTTTGCTTTAGAACTACAGCATTACAGAGGGAGCAGAACATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGCTTTGCTTTAGAACTACAGCATTACAGAGGGAGCAGAACATT  245

seq1  AATTTTTGAGGTCTTAAATAATTACATGAAATAAAATTGGCTCCCTTTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGAGGTCTTAAATAATTACATGAAATAAAATTGGCTCCCTTTCT  295

seq1  CCTTAATTAAACACTAGTAGTGCTAAAACACTATAAATTTAGAAATAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTAAACACTAGTAGTGCTAAAACACTATAAATTTAGAAATAATC  345

seq1  ACAGAGCCTAATCATTTATCTTCTTATTGGCTTTATAACTAATTTATATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTAATCATTTATCTTCTTATTGGCTTTATAACTAATTTATATT  395

seq1  TAACCTTCCTCGGAAATTATGATAAGAATGTATCTTTTTAAAGAAATCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTCCTCGGAAATTATGATAAGAATGTATCTTTTTAAAGAAATCCA  445

seq1  AAGCAACTGTCTTACGAATGTCTAGTACTTGGATAGAATGAAACAGGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTGTCTTACGAATGTCTAGTACTTGGATAGAATGAAACAGGGAC  495

seq1  TTAAAATATTTTATGACTAAAAGATGATAAATAATGAGTTGCACCATTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATTTTATGACTAAAAGATGATAAATAATGAGTTGCACCATTTA  545

seq1  TATGGCTTAGAAACAAAAAACAACTTCCTTACTAATATTATGGAAGAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTAGAAACAAAAAACAACTTCCTTACTAATATTATGGAAGAGTT  595

seq1  GATAAATCCAGAACTCATTTGTTCAGATTTTCAATTAATGACAATGTATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCCAGAACTCATTTGTTCAGATTTTCAATTAATGACAATGTATT  645

seq1  ATTTTCAATAAAATGGATTCCTGTTTAAGTGTATATATGTCAAGGGTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATAAAATGGATTCCTGTTTAAGTGTATATATGTCAAGGGTAAT  695

seq1  ACTATTAATTAATAAATATATATAACTGCATAGCTAGACTTGAACAAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAATTAATAAATATATATAACTGCATAGCTAGACTTGAACAAGCC  745

seq1  AGGTTTGACTTCTGTTCCTACTTGTTGCAATTATTTTCATAGATTGTAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGACTTCTGTTCCTACTTGTTGCAATTATTTTCATAGATTGTAGC  795

seq1  TAAAATAGTTCACTACTGGATTTATCCTTCCTTCATTTGTACTTAAAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGTTCACTACTGGATTTATCCTTCCTTCATTTGTACTTAAAAGG  845

seq1  AAAAAGCATTGTAAAATTTACCACTGACATGAGTATGAAATTTTCTCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCATTGTAAAATTTACCACTGACATGAGTATGAAATTTTCTCTGT  895

seq1  TGACAATGAATCCACTCAGCTTGTGATCAAAACTGTAGCCCTAGGGTAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGAATCCACTCAGCTTGTGATCAAAACTGTAGCCCTAGGGTAAC  945

seq1  ACAGAACGTGTGTCAACTACATTCCGCTGTTATGTCTCACAAAAAATCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACGTGTGTCAACTACATTCCGCTGTTATGTCTCACAAAAAATCCC  995

seq1  CTCTAGGAATTCAATCACAGAATTCTAAATCTATATTTATATGGAAGTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGAATTCAATCACAGAATTCTAAATCTATATTTATATGGAAGTTA  1045

seq1  CAAAGATTAATAGGGATGGCACATAAAAAGTGTAGCAGTGTGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTAATAGGGATGGCACATAAAAAGTGTAGCAGTGTGAATTC  1092