BAC Information

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BAC

Clone NameB6Ng01-199P15
Chromosome2 (Build37)
Map Location 80,874,416 - 80,875,538
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneLOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199P15.bB6Ng01-199P15.g
ACCGA021165GA021166
length1,125377
definitionB6Ng01-199P15.b B6Ng01-199P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataaattctagctttctaagatttatcaaataaaatgcagagt
cccaattgagtttccatttctaccaaatgacatattatttaatacaaata
tattcgaatcacacaggatgtattactcataaaaagtacttgttctttat
ctacaatttgaatatcccttggtatcttatatttttacttgtgataaaac
aaaatttccaaaggcaaatttccacatcatcaactcttctggaaatggat
gcaattcagaagctggtttgtaattccacactctttcctttagtcctagg
ctcaaggaacctatgagtccagataagacatcagtactgagattccatgt
ccttgattcttgtgcattcaatgttgtatctctgctatctctcttttttt
tctgccacattcagcaccctgtactctggggcattcagactgagccttgc
caatattctggaatacctattttcacatgggaagcacccgagatgcttca
gaaacatgcggtgccatctcagagcatttcaacagaaatgtcaaggggta
aggtacaatttttggcgtttgttaaccatatgatgattcacatacacctt
aagaataaaaaccttttatacagatgtcaggaacacccgtagttaattgt
agatgcaaattaaaatcacctatggaattctgaaaaattcccatagccca
ggctaagttcatctgcatagcagagagtgagaaacatgcacccttaggta
aagtcaggcacagtttagagatactggcccggagacagtgatctccatga
cggctaaatatctttcttccagtatcagctacaatactctttctactcct
gacttatacatggatcttgttgcatttcatctcccaccccttccagctca
aagtcattaaaagcagaattttgtagtcatttttatactgttgaatttta
gaccactgaagctttggggtaaagcaagaattccacatctcagaagaaaa
atgttcagtttggctatgagatacatttgctcctccaaggagacagtcac
ccatcatctgtctactttatttacctccctaactaaacatctgacctctc
cattcagtcgcattctttatgtgag

attaagagagtgaagaaaagcaaagcttgggggcagagttggcctcctat
ggttaaagagcagcagtgggggaagccagaaggctggggtatgtaactta
ggggcactgccagggcacagcacagaggtatacctagggatcctgaagac
ctttgcaggctctatggtgctatggcttctatctgggggaagtgagagcc
atttcagagtttgtggcacaagactgtcatcaactagttatgctcgaaag
gggccactttaacttcatattacagatagactggggggaggggaggtgaa
taaggacagatgcaggaagatcatgaaggggatatgtagtcatgtagtcc
tctgtttagagatgcttggtatgctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80874416_80875538
seq2: B6Ng01-199P15.b_44_1168 (reverse)

seq1  CTCACATAAAG-ATGCGACTGAAATGGAGAGGTCAGGATGTTTAGTTAGG  49
      ||||||||||| ||||||||| ||||||||||||| ||||||||||||||
seq2  CTCACATAAAGAATGCGACTG-AATGGAGAGGTCA-GATGTTTAGTTAGG  48

seq1  GA-GTAATTAAGTTAGACAGATGATGGGGTTGACTGTCTCCTTGGA-GAG  97
      || |||| |||  |||||||||||||||  |||||||||||||||| |||
seq2  GAGGTAAATAAAGTAGACAGATGATGGG--TGACTGTCTCCTTGGAGGAG  96

seq1  CAAATGTATCTCATAGCCAAACTGAACATTTTTCTTCTGAGATGTGGAAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTATCTCATAGCCAAACTGAACATTTTTCTTCTGAGATGTGGAAT  146

seq1  TCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTC-ACAGTATAAAAA  196
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTTGCTTTACCCCAAAGCTTCAGTGGTCTAAAATTCAACAGTATAAAAA  196

seq1  TGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGG--TGGAGA  244
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  TGACTACAAAATTCTGCTTTTAATGACTTTGAGCTGGAAGGGGTGGGAGA  246

seq1  TGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCAACAAGATCCATGTATAAGTCAGGAGTAGAAAGAGTATTGTA  296

seq1  GCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCCG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATACTGGAAGAAAGATATTTAGCCGTCATGGAGATCACTGTCTCCG  346

seq1  GGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTATCTCTAAACTGTGCCTGACTTTACCTAAGGGTGCATGTTTCT  396

seq1  CACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTGCTATGCAGATGAACTTAGCCTGGGCTATGGGAATTTTTCAG  446

seq1  AATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATAGGTGATTTTAATTTGCATCTACAATTAACTACGGGTGTTCC  496

seq1  TGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCTGTATAAAAGGTTTTTATTCTTAAGGTGTATGTGAATCATCAT  546

seq1  ATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAACAAACGCCAAAAATTGTACCTTACCCCTTGACATTTCTGTTG  596

seq1  AAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCTGAGATGGCACCGCATGTTTCTGAAGCATCTCGGGTGCTTCC  646

seq1  CATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAAATAGGTATTCCAGAATATTGGCAAGGCTCAGTCTGAATGCC  696

seq1  CCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTACAGGGTGCTGAATGTGGCAGAAAAAAAAGAGAGATAGCAGAG  746

seq1  ATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACATTGAATGCACAAGAATCAAGGACATGGAATCTCAGTACTGAT  796

seq1  GTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATCTGGACTCATAGGTTCCTTGAGCCTAGGACTAAAGGAAAGAGT  846

seq1  GTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTACAAACCAGCTTCTGAATTGCATCCATTTCCAGAAGAGTTGA  896

seq1  TGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGTAAAAATA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGGAAATTTGCCTTTGGAAATTTTGTTTTATCACAAGTAAAAATA  946

seq1  TAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATACCAAGGGATATTCAAATTGTAGATAAAGAACAAGTACTTTTTA  996

seq1  TGAGTAATACATCCTGTGTGATTCGAATATATTTGTATTAAATAATATGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATACATCCTGTGTGATTCGAATATATTTGTATTAAATAATATGT  1046

seq1  CATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGATAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTAGAAATGGAAACTCAATTGGGACTCTGCATTTTATTTGATAA  1096

seq1  ATCTTAGAAAGCTAGAATTTATTGAATTC  1123
      |||||||||||||||||||||||||||||
seq2  ATCTTAGAAAGCTAGAATTTATTGAATTC  1125


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