BAC Information

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BAC

Clone NameB6Ng01-201C04
Chromosome2 (Build37)
Map Location 41,672,048 - 41,673,082
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201C04.bB6Ng01-201C04.g
ACCGA021995GA021996
length1,2181,034
definitionB6Ng01-201C04.b B6Ng01-201C04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatcgatgtaccccatttttaaataaggttatttggtt
ctatggagtctaacttctttgagttctttgtatacattggatattaaccc
tcagtcggatgtggaattggtaaagaacttttcccagtctgctggttgcc
attttgtcctattgacaatgactttgccttatagaagttttgcaatttta
tgaggtcccatttgtccattcttgatcctacagcataagccattggtctt
ctgttcaggaaaatatcccctgtgcccatttgtttgacatacttccccac
ttactgttctattagattctgtgtatctagttttaggtagaagtccttga
tccatttgaacttgagctttttacagggagataataatggatcaatttgc
attcttttacatgttgactgacagttgaactagcaccatttgctgaaaat
gctgtcttttttccactgggtcgtttcagctcctttgtcaaagataagtg
actgtaggtgtgtgggttcatttctgggtcatcaattctattctatgatc
tacctgcctgtcattgtaccaatactatgcagttttaatcactatagctc
tgtaataatgtgtgaggtcagggatgatgattcacccagatattctatta
ttgttgagaatagttttcactatattgcgtttttgttattccagatgaat
ttgagaattgctctttataactctatgaagaattgagttagaattttgat
ggggattgcattgaatttgtagattgtttttggcaagaaggtcactttac
aatataaatcctgccaatccatgaacatgaaaatcattcacttttttgag
ggtcttcctcgatttttttttcttcagagactttaagttcttgtacaaat
ccctcacttgtttggttagggtcaacaccaagaatattttatattgtttg
tgactatcatgaagagtggtgtttccctaatttctttttcaacctgttta
tccttgagtacacaaaagtactggatttgttgagtaattttaatataatt
ttatatctgactacttctgaatggttacacctgaagaatttctctgctga
accttttgtgtcactaagtataccatcatatcactgctaatagtaatttg
gactatcgttccaattccaattccttgacctcttttgttgccctaattgg
aaaccataaaacgctcta

gaattcattttctacgtttcactcatgaagcagaaatgagaaatacataa
gcaaatgttatgcaatcctgtagcctgctaacgaagttttcattctcgca
tttaggaactttgaaaactaatagaaattatttgacctcactgagtccat
ttcttcatccatgaaactgtgaaaaatttgttaaattacctcttacattt
gcagtggtgattaaatgcatatgagcatggaaaaaattgggcttaacaca
tttttatcactagtaagtagcaaatctgcgaagtgagaataggaagattt
ttataaacatcccaaggggttagtagatgttctctatcctcataactgga
cacaagctgcttttgttctttggtttactatcttataattgctcagtata
aacatttgcattctttaatgtctaaaacatgaagaaacagacacatatat
tgctgacacaaaaagaatgtttaggtcatattttttctaaaataaaagtc
tctttatttgctagcataataccatatttgaagctgtataagtctcaata
ttacatataaaatggaaaaataaaaaataaaaatgagaacagtgaggtat
ttgatattttaattgatgtgattattatgtcattttttccttaatgacct
accactaatttatataatttatgaacttcttaagactgttgataacttta
cagtgggcacaaacatcaagtggcacctcactaacaaactctacatcctt
gtgatgcagaattggtaaggcttctgttcttctatcccaaagaagggata
ctgttagaacaagaagctgaagctattacaaatctgaccattatggacaa
atattctgaataattaagaaaatttgataaaattaaaatataaaattatt
cagaggaaaaagtttagagccctaaatatgaagatgttcatgaaaactgg
gaataaggaatccataaaccgttttagttagaggctgctggtctgacctt
catgggctccacagggcttttgctgctaagataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41672048_41673082
seq2: B6Ng01-201C04.g_66_1099 (reverse)

seq1  TTATCTTAGCAGCAAAAGCCCTGTTGGAGGCCATGAAGGTCAGACCAGCA  50
      ||||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  TTATCTTAGCAGCAAAAGCCCTG-TGGAGCCCATGAAGGTCAGACCAGCA  49

seq1  GCCTCTAACTAAAACGGTTTATGGATTCCTTATTCCCAGTTTTCATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAACTAAAACGGTTTATGGATTCCTTATTCCCAGTTTTCATGAAC  99

seq1  ATCTTCATATTTAGGGCTCTAAACTTTTTCCTCTGAATAATTTTATATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATATTTAGGGCTCTAAACTTTTTCCTCTGAATAATTTTATATTT  149

seq1  TAATTTTATCAAATTTTCTTAATTATTCAGAATATTTGTCCATAATGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTATCAAATTTTCTTAATTATTCAGAATATTTGTCCATAATGGTC  199

seq1  AGATTTGTAATAGCTTCAGCTTCTTGTTCTAACAGTATCCCTTCTTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGTAATAGCTTCAGCTTCTTGTTCTAACAGTATCCCTTCTTTGGG  249

seq1  ATAGAAGAACAGAAGCCTTACCAATTCTGCATCACAAGGATGTAGAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAACAGAAGCCTTACCAATTCTGCATCACAAGGATGTAGAGTTT  299

seq1  GTTAGTGAGGTGCCACTTGATGTTTGTGCCCACTGTAAAGTTATCAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGAGGTGCCACTTGATGTTTGTGCCCACTGTAAAGTTATCAACAG  349

seq1  TCTTAAGAAGTTCATAAATTATATAAATTAGTGGTAGGTCATTAAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAAGTTCATAAATTATATAAATTAGTGGTAGGTCATTAAGGAAA  399

seq1  AAATGACATAATAATCACATCAATTAAAATATCAAATACCTCACTGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACATAATAATCACATCAATTAAAATATCAAATACCTCACTGTTCT  449

seq1  CATTTTTATTTTTTATTTTTCCATTTTATATGTAATATTGAGACTTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTATTTTTTATTTTTCCATTTTATATGTAATATTGAGACTTATAC  499

seq1  AGCTTCAAATATGGTATTATGCTAGCAAATAAAGAGACTTTTATTTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAATATGGTATTATGCTAGCAAATAAAGAGACTTTTATTTTAGA  549

seq1  AAAAATATGACCTAAACATTCTTTTTGTGTCAGCAATATATGTGTCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATGACCTAAACATTCTTTTTGTGTCAGCAATATATGTGTCTGTT  599

seq1  TCTTCATGTTTTAGACATTAAAGAATGCAAATGTTTATACTGAGCAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGTTTTAGACATTAAAGAATGCAAATGTTTATACTGAGCAATTA  649

seq1  TAAGATAGTAAACCAAAGAACAAAAGCAGCTTGTGTCCAGTTATGAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTAAACCAAAGAACAAAAGCAGCTTGTGTCCAGTTATGAGGAT  699

seq1  AGAGAACATCTACTAACCCCTTGGGATGTTTATAAAAATCTTCCTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATCTACTAACCCCTTGGGATGTTTATAAAAATCTTCCTATTCT  749

seq1  CACTTCGCAGATTTGCTACTTACTAGTGATAAAAATGTGTTAAGCCCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCGCAGATTTGCTACTTACTAGTGATAAAAATGTGTTAAGCCCAAT  799

seq1  TTTTTCCATGCTCATATGCATTTAATCACCACTGCAAATGTAAGAGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATGCTCATATGCATTTAATCACCACTGCAAATGTAAGAGGTAA  849

seq1  TTTAACAAATTTTTCACAGTTTCATGGATGAAGAAATGGACTCAGTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAATTTTTCACAGTTTCATGGATGAAGAAATGGACTCAGTGAGG  899

seq1  TCAAATAATTTCTATTAGTTTTCAAAGTTCCTAAATGCGAGAATGAAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATTTCTATTAGTTTTCAAAGTTCCTAAATGCGAGAATGAAAAC  949

seq1  TTCGTTAGCAGGCTACAGGATTGCATAACATTTGCTTATGTATTTCTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTAGCAGGCTACAGGATTGCATAACATTTGCTTATGTATTTCTCAT  999

seq1  TTCTGCTTCATGAGTGAAACGTAGAAAATGAATTC  1035
      |||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCATGAGTGAAACGTAGAAAATGAATTC  1034


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