BAC Information

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BAC

Clone NameB6Ng01-202N18
Chromosome2 (Build37)
Map Location 138,561,764 - 138,562,911
singlet/doubletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202N18.bB6Ng01-202N18.g
ACCGA023237GA023238
length1,1911,138
definitionB6Ng01-202N18.b B6Ng01-202N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgctccggtgtctatcaggaagttgacgggagtcccctccac
ggacaaagttaccctaggctcagggagggggtctgagccccgacttccct
aatcatcttctagggtcaggaccttggatcgctcccgttttttagggcaa
tctctagcccagtgtcctttctctttgcaataggcacattggtctttttc
cagtggtatctttctgccacctggcggtttcactgccctgttgcccagga
gccctattttaccttttcctgactgtctatcatttataactgcggccaaa
attttactcaaatttctctcctgacggcgatcccgtctattttccctctc
ctccatttctttcttctctctctcctgcctctcttcttctgtttccctct
tatgatagactttctctgcttcttttactaaatcttggagcgtatgatct
tggagcccctccagcctttgcagctttttcttaatgtcgggagcggactg
accaatgaaggccatggctacagcggctctctgcccctctgacaaggggt
caaaaggggtgtacctcctatatgcctccattagacgctcaaggaagact
gagggtggttcagtctgcccctgcaagacctctcttaccttagcaaaatt
ggtgggccgtctagtggctcctctgagacctgccactagagtccggcgat
agacaaggaggcatcccctaccttccgcggtgttgtagtcccagttgggg
cggttcaaggggaaagcctcgtccacgaggttagggagggcagtgggtgt
gccgtcctctcccagaacattttttctcgcctccatcaggattctttctc
tttcttctgtggtaaaaagaacctgcaaaagctgctgacaatcatcccaa
gtgggttgatgggagaacataagtgactcaaggagcccagtaagcccaga
ggggttctctgagaaaggagggtggtagttttccaattatataatcagag
gagaaaaggccagtactgtaaaggatgagatcatggtcctgcgctggcct
cctacatgtgctcttgattgcagcactgtgagtctgcccccttcctcccg
ggcttcggcctgcgatcgagttccccagccgtcctggtacctttcaattg
ttctgttgtgtggagcctcaagtcagacgtgccgtggatgc
gaattctcacctgaggaatatcaaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctaagat
tccatctcacaccagtcataatggctatgatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgttccaactggtaaaaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctgttgcaggttttaaa
tgacgtatttgatggtattgtcttctatctctctatctctttatctatct
ctcactctatccattcatccatctatcatcaattagctgtcatctatcta
tctatctatctatctatctatctatctatctatctatctatcatctgtca
tcatctacctacctaccatctctctatgtctctgtcacaatctatctatc
tgtatctttctcttctctctctctctctctctctcacatctacttgccta
ttcacctgcctcttactatttactattttccttgtctctttctatttaat
aaactcactcataaccaaaattatggatacaatatattattctacgaacc
ttacaaaatgacactgaattccctttacagatcagcataccctattttca
tgaatttaaaaaacatggtttatgaggatatcatccatattattaacatt
ctgtggatcttgaatctcaatgaattttttttatatatttaatctatgca
acattctaagctctctaatgcctctcttaatcaatcacactaaaaggtaa
tcattattctttgtgatttttataaaacccaagtactgtatgatatttct
tctgccctctgacttttcaaactattagattattatttagctaatcttct
tttttaaacattattgtgtgcttcaaataatcttgtcagtgcaacactta
ttggcccatgttctgtttaaacttgcctagacttcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138561764_138562911
seq2: B6Ng01-202N18.g_67_1204 (reverse)

seq1  TGTGAAAATCTA-GCAAGTTTTATACAGAACAATTTGCCCATTAAGTGTT  49
      |||| || |||| ||||| |||| ||||||||  | | ||| ||||||||
seq2  TGTG-AAGTCTAGGCAAG-TTTAAACAGAACA--TGGGCCAATAAGTGTT  46

seq1  TCACTGGACAGATTATTTGAAGGCAACACAATAATGTTTTAAAAAGAAGA  99
       |||||   |||||||||||||   |||||||||||||| ||||||||||
seq2  GCACTGACAAGATTATTTGAAG--CACACAATAATGTTTAAAAAAGAAGA  94

seq1  TTAGCTAAATAATTATCTAATAGTTTGAAAAGTCAGAGGGCAAGAAGAAA  149
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  TTAGCTAAATAATAATCTAATAGTTTGAAAAGTCAGAGGGC-AGAAGAAA  143

seq1  TTATTCATACAGTTACTTGGGTTTTATAAAAAATTCACAAAGAATAATGA  199
      |   |||||||| |||||||||||||||||||  ||||||||||||||||
seq2  T--ATCATACAG-TACTTGGGTTTTATAAAAA--TCACAAAGAATAATGA  188

seq1  TTACCTTTTAGTGTGATTGATTAAGAGAGGCATTAGAGAGCTTAGAATGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTTAGTGTGATTGATTAAGAGAGGCATTAGAGAGCTTAGAATGT  238

seq1  TGCATAGATTAAATATAT-AAAAAAATTCATTGAGATTCAAGATCCACAG  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCATAGATTAAATATATAAAAAAAATTCATTGAGATTCAAGATCCACAG  288

seq1  AATGTTAATAATATGGATGATATCCTCATAAACCATGTTTTTTAAATTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAATAATATGGATGATATCCTCATAAACCATGTTTTTTAAATTCA  338

seq1  TGAAAATAGGGTATGCTGATCTGTAAAGGGAATTCAGTGTCATTTTGTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAGGGTATGCTGATCTGTAAAGGGAATTCAGTGTCATTTTGTAA  388

seq1  GGTTCGTAGAATAATATATTGTATCCATAATTTTGGTTATGAGTGAGTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCGTAGAATAATATATTGTATCCATAATTTTGGTTATGAGTGAGTTT  438

seq1  ATTAAATAGAAAGAGACAAGGAAAATAGTAAATAGTAAGAGGCAGGTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAGAAAGAGACAAGGAAAATAGTAAATAGTAAGAGGCAGGTGAA  488

seq1  TAGGCAAGTAGATGTGAGAGAGAGAGAGAGAGAGAGAAGAGAAAGATACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAGTAGATGTGAGAGAGAGAGAGAGAGAGAGAAGAGAAAGATACA  538

seq1  GATAGATAGATTGTGACAGAGACATAGAGAGATGGTAGGTAGGTAGATGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGATTGTGACAGAGACATAGAGAGATGGTAGGTAGGTAGATGA  588

seq1  TGACAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA  638

seq1  TAGATAGATGACAGCTAATTGATGATAGATGGATGAATGGATAGAGTGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATGACAGCTAATTGATGATAGATGGATGAATGGATAGAGTGAG  688

seq1  AGATAGATAAAGAGATAGAGAGATAGAAGACAATACCATCAAATACGTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAAAGAGATAGAGAGATAGAAGACAATACCATCAAATACGTCA  738

seq1  TTTAAAACCTGCAACAGCTTCTGGCTATTATAAATAAGGCTGCTATGAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACCTGCAACAGCTTCTGGCTATTATAAATAAGGCTGCTATGAAC  788

seq1  ATAGTGGAGCATGTGTCCTTTTTACCAGTTGGAACATCTTCTGGATATAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGGAGCATGTGTCCTTTTTACCAGTTGGAACATCTTCTGGATATAT  838

seq1  GCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTC  888

seq1  TGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCC  938

seq1  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  988

seq1  GCTGTCACCTGAATTTTTGATCATAGCCATTATGACTGGTGTGAGATGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACCTGAATTTTTGATCATAGCCATTATGACTGGTGTGAGATGGA  1038

seq1  ATCTTAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGATGCTGAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGATGCTGAG  1088

seq1  CATTTTTTCAGGTGCTTCTCAGCCATTTGATATTCCTCAGGTGAGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTCAGGTGCTTCTCAGCCATTTGATATTCCTCAGGTGAGAATTC  1138