BAC Information

Click to search

BAC

Clone NameB6Ng01-203E12
Chromosome2 (Build37)
Map Location 111,578,641 - 111,717,233
singlet/doubletdoublet
Overlap geneOlfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1
Downstream geneOlfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203E12.bB6Ng01-203E12.g
ACCGA023539GA023540
length1,1201,189
definitionB6Ng01-203E12.b B6Ng01-203E12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,578,641 - 111,579,720)(111,716,032 - 111,717,233)
sequence
gaattcatatgtgtgacagttctgtgtttagaaggccttgtttctttgat
gttctttatcctatcttgttcttacactctttctgtctcctcttctcctg
aactcatgaaacatggaagggagagatttgaaggggccatcccatttaaa
gctggctgttttgaggtctctcactctctgcatattgtctggctattggt
ctctgggtcttgtcaccttgggctgcaggagaatgctcctctgttgatag
ctgagcaaggcacagttccatgattatagaagaatatcatgaagaaatcg
tttaattgttgctgcattcctttgcagaacagcaatatttgactttctct
taggtccctttgctatctagtttcaagttcttgaccctacccaagcagca
atggatatgtgttttaactcatggatagtttctggatcttcaattctatt
ccattgatctaccttcctgtcactgtaccaataccatgaagtttttagtc
acgattgctctgtagtacagcttgaggtcagggaaaaatggaaacataga
atatcaaaaaccatacaagaatctgtgaaagcaatttgattcttagcatc
tataaaatatttgctaaatatagaaaactatttcccatgctcttaataat
tctgtaggtctttgttcaaggctgggtctgtgtaagacttctcctatcca
cattaacgtgcacattgtagtcattgttcaagtcttatttaagcagtcat
tttgttgagatatcatggatgaagcttccctgtcatttctaggagataca
gtctcagagcacatttcctttacctctggctcttataacttttcaaagcc
ctttctgcaatgttccctgagcactagatgtagaagttagattatagatg
tagcagatatatcaaattggggctacttagccttattctctgaattttgg
aacaattgtggtctttttaaaataatagtatccatctcttataaagaaaa
gtttatttgatgagggggttagagttacacttctctgtgaatataggata
agtatttagaatgtatgtagaatttactaaacccacagtttagtaagtgt
taaaaataagggtttcccca
gaattctctgactggaggatgctgccttttggaaataggtatgtgaaaga
tggaaggaacatgactatagaacaaactgtagaactctctcaattcaatt
ccaaaaaggcagcctagtggcagaatctcatctgtagatataaaggtatt
tatttatttatttatttatttatttatttttatttatttatttttattac
gtattttcctcaattacatttccaatgaaaacacattagttagattataa
tgtagagaagatgaaacagatcacaaccagaagaaaataacacattgtaa
attgtggagaaaagcagagacagcaaacactgacttataccttgtttttt
tttgttttgttttgttttgtcttgttttaaacctgtacctttagtttaag
gaaaagttggtcttaagcatagatgaggattttttgaagtttaagtatga
tagagtaaaggattttgccattaactaatttgagaatcaaagtagctata
taacctatggaagttggaaatcaggactacttgttttgatttgtttctat
gctcccagacaaattacctagaaataattaatatattatagttccctgtg
gcctctttttgggaaataaaacccaaatgatagacagaaaaatagagata
gaataactgtaagaaagtgatataataaaatattccctgcatgtttaatt
tcagaaccctataatttacacacatataaaaatggctaaaatattattag
atggaaaatatcaagaattttctatgaattatgtttattgagtttttagt
tgttttcagtttccttcttaatttgtgttatcacacataaaatacattta
aataatatccagggaaaaaccaaaccagaatctcagtgcatagggattga
cattatgaaaaatatgagtgaatgggtaacaactggaacgcttaactctt
gatacagagacctgagatggaggaaaatggcacagaactgagtagcagat
ttctgacttgtgcatttttttttattgtgaaaatagacgtggtacacatt
taaacattggactgataatcatctagaagctgagaaaatatgcattatga
atgattgggcacattgaatgccttaaagaataaattgcatcttacgagta
gttttataaaaggttaaggtatttgcctggtgtgtcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111578641_111579720
seq2: B6Ng01-203E12.b_85_1169

seq1  CCTTGTTTCTTTGATGTTCTTTATCCTATCTTGTTCTTACACTCTTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTCTTTGATGTTCTTTATCCTATCTTGTTCTTACACTCTTTCTG  50

seq1  TCTCCTCTTCTCCTGAACTCATGAAACATGGAAGGGAGAGATTTGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTTCTCCTGAACTCATGAAACATGGAAGGGAGAGATTTGAAGGG  100

seq1  GCCATCCCATTTAAAGCTGGCTGTTTTGAGGTCTCTCACTCTCTGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCATTTAAAGCTGGCTGTTTTGAGGTCTCTCACTCTCTGCATAT  150

seq1  TGTCTGGCTATTGGTCTCTGGGTCTTGTCACCTTGGGCTGCAGGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGCTATTGGTCTCTGGGTCTTGTCACCTTGGGCTGCAGGAGAATG  200

seq1  CTCCTCTGTTGATAGCTGAGCAAGGCACAGTTCCATGATTATAGAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGTTGATAGCTGAGCAAGGCACAGTTCCATGATTATAGAAGAAT  250

seq1  ATCATGAAGAAATCGTTTAATTGTTGCTGCATTCCTTTGCAGAACAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAGAAATCGTTTAATTGTTGCTGCATTCCTTTGCAGAACAGCAA  300

seq1  TATTTGACTTTCTCTTAGGTCCCTTTGCTATCTAGTTTCAAGTTCTTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACTTTCTCTTAGGTCCCTTTGCTATCTAGTTTCAAGTTCTTGAC  350

seq1  CCTACCCAAGCAGCAATGGATATGTGTTTTAACTCATGGATAGTTTCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCAAGCAGCAATGGATATGTGTTTTAACTCATGGATAGTTTCTGG  400

seq1  ATCTTCAATTCTATTCCATTGATCTACCTTCCTGTCACTGTACCAATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAATTCTATTCCATTGATCTACCTTCCTGTCACTGTACCAATACC  450

seq1  ATGAAGTTTTTAGTCACGATTGCTCTGTAGTACAGCTTGAGGTCAGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTTTTAGTCACGATTGCTCTGTAGTACAGCTTGAGGTCAGGGAA  500

seq1  AAATGGAAACATAGAATATCAAAAACCATACAAGAATCTGTGAAAGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAACATAGAATATCAAAAACCATACAAGAATCTGTGAAAGCAAT  550

seq1  TTGATTCTTAGCATCTATAAAATATTTGCTAAATATAGAAAACTATTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTTAGCATCTATAAAATATTTGCTAAATATAGAAAACTATTTCC  600

seq1  CATGCTCTTAATAATTCTGTAGGTCTTTGTTCAAGGCTGGGTCTGTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCTTAATAATTCTGTAGGTCTTTGTTCAAGGCTGGGTCTGTGTAA  650

seq1  GACTTCTCCTATCCACATTAACGTGCACATTGTAGTCATTGTTCAAGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTCCTATCCACATTAACGTGCACATTGTAGTCATTGTTCAAGTCT  700

seq1  TATTTAAGCAGTCATTTTGTTGAGATATCATGGATGAAGCTTCCCTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGCAGTCATTTTGTTGAGATATCATGGATGAAGCTTCCCTGTCA  750

seq1  TTTCTAGGAGATACAGTCTCAGAGCACATTTCCTTTACCTCTGGCTCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGAGATACAGTCTCAGAGCACATTTCCTTTACCTCTGGCTCTTA  800

seq1  TAACTTTTCAAAGCCCTTTCTGCAATGTTCCCTGAGCACTAGATGTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTCAAAGCCCTTTCTGCAATGTTCCCTGAGCACTAGATGTAGAA  850

seq1  GTTAGATTATAGATGTAGCAGATATATCAAATTGGGGCTACTTAGCCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTATAGATGTAGCAGATATATCAAATTGGGGCTACTTAGCCTTA  900

seq1  TTCTCTGAATTTT-GAACAATTGTGGTCTTTTTAAAATAATAGTATCCAT  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAATTTTGGAACAATTGTGGTCTTTTTAAAATAATAGTATCCAT  950

seq1  CTCTTATAAAGAAAAGTTTATTTGATGA-GGGGTTAGAGTTACACTTCTC  998
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCTTATAAAGAAAAGTTTATTTGATGAGGGGGTTAGAGTTACACTTCTC  1000

seq1  TGTGAATATAAGGATAAGTATTTAGAATGTATGTAGAATTTACTAAA-CC  1047
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  TGTGAATAT-AGGATAAGTATTTAGAATGTATGTAGAATTTACTAAACCC  1049

seq1  ACAGTTTAGTAAAGTGTT-AAAATA---GGTTCCCCA  1080
      |||||||||| ||||||| ||||||   | |||||||
seq2  ACAGTTTAGT-AAGTGTTAAAAATAAGGGTTTCCCCA  1085

seq1: chr2_111716032_111717233
seq2: B6Ng01-203E12.g_66_1254 (reverse)

seq1  TGTG-CACACCAAGAAAATA-CTTAA-CTTTTATAAAACTACTCTGTGTA  47
      |||| ||||||| | ||||| ||||| |||||||||||||||||   |||
seq2  TGTGACACACCAGGCAAATACCTTAACCTTTTATAAAACTACTC---GTA  47

seq1  AGAATGCAATATTAATCTTTTAAGACCATCCATGTGCCCCATCATTTCAA  97
      || ||||||| ||| || |||||| |  || |||||||| ||||||   |
seq2  AG-ATGCAAT-TTATTC-TTTAAGGCATTCAATGTGCCCAATCATT--CA  92

seq1  TAATGCATA-TTTCTCTGCTCCTAGATGAATTTATCAGGTCAAATGTTTA  146
      ||||||||| |||||| ||| ||||||||  |||||| ||| ||||||||
seq2  TAATGCATATTTTCTCAGCTTCTAGATGA--TTATCA-GTCCAATGTTTA  139

seq1  AATTGTGTA-CACGTCTATTTTTCAACCAAT-AAAAAAAATGCACAAGTC  194
      || |||||| |||||||| ||||||  |||| ||||||||||||||||||
seq2  AA-TGTGTACCACGTCTA-TTTTCA--CAATAAAAAAAAATGCACAAGTC  185

seq1  AGAAATTCTGCTACTCAGTTCTGTGCCATTTTTCCTTCATCTTCAGGTTC  244
      ||||| |||||||||||||||||||||| ||||||| |||| ||||| ||
seq2  AGAAA-TCTGCTACTCAGTTCTGTGCCA-TTTTCCTCCATC-TCAGG-TC  231

seq1  TCTGTATCAAGAGTTAAGCGTTCCAGTTGTTACCCATTCACTCATATTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCAAGAGTTAAGCGTTCCAGTTGTTACCCATTCACTCATATTTT  281

seq1  TCATAATGTCAATCCCTATGCACTGAGATTCTGGTTTGGTTTTTCCCTGG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATGTCAATCCCTATGCACTGAGATTCTGGTTTGGTTTTTCCCTGG  331

seq1  ATATTATTTAAATGTATTTTATGTGTGATAACACAAATTAAGAAGGAAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTAAATGTATTTTATGTGTGATAACACAAATTAAGAAGGAAAC  381

seq1  TGAAAACAACTAAAAACTCAATAAACATAATTCATAGAAAATTCTTGATA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAACTAAAAACTCAATAAACATAATTCATAGAAAATTCTTGATA  431

seq1  TTTTCCATCTAATAATATTTTAGCCATTTTTATATGTGTGTAAATTATAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCTAATAATATTTTAGCCATTTTTATATGTGTGTAAATTATAG  481

seq1  GGTTCTGAAATTAAACATGCAGGGAATATTTTATTATATCACTTTCTTAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGAAATTAAACATGCAGGGAATATTTTATTATATCACTTTCTTAC  531

seq1  AGTTATTCTATCTCTATTTTTCTGTCTATCATTTGGGTTTTATTTCCCAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTCTATCTCTATTTTTCTGTCTATCATTTGGGTTTTATTTCCCAA  581

seq1  AAAGAGGCCACAGGGAACTATAATATATTAATTATTTCTAGGTAATTTGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCCACAGGGAACTATAATATATTAATTATTTCTAGGTAATTTGT  631

seq1  CTGGGAGCATAGAAACAAATCAAAACAAGTAGTCCTGATTTCCAACTTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGCATAGAAACAAATCAAAACAAGTAGTCCTGATTTCCAACTTCC  681

seq1  ATAGGTTATATAGCTACTTTGATTCTCAAATTAGTTAATGGCAAAATCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTTATATAGCTACTTTGATTCTCAAATTAGTTAATGGCAAAATCCT  731

seq1  TTACTCTATCATACTTAAACTTCAAAAAATCCTCATCTATGCTTAAGACC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTATCATACTTAAACTTCAAAAAATCCTCATCTATGCTTAAGACC  781

seq1  AACTTTTCCTTAAACTAAAGGTACAGGTTTAAAACAAGACAAAACAAAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCCTTAAACTAAAGGTACAGGTTTAAAACAAGACAAAACAAAAC  831

seq1  AAAACAAAAAAAAACAAGGTATAAGTCAGTGTTTGCTGTCTCTGCTTTTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAAAAACAAGGTATAAGTCAGTGTTTGCTGTCTCTGCTTTTC  881

seq1  TCCACAATTTACAATGTGTTATTTTCTTCTGGTTGTGATCTGTTTCATCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAATTTACAATGTGTTATTTTCTTCTGGTTGTGATCTGTTTCATCT  931

seq1  TCTCTACATTATAATCTAACTAATGTGTTTTCATTGGAAATGTAATTGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACATTATAATCTAACTAATGTGTTTTCATTGGAAATGTAATTGAG  981

seq1  GAAAATACGTAATAAAAATAAATAAATAAAAATAAATAAATAAATAAATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACGTAATAAAAATAAATAAATAAAAATAAATAAATAAATAAATA  1031

seq1  AATAAATAAATACCTTTATATCTACAGATGAGATTCTGCCACTAGGCTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATACCTTTATATCTACAGATGAGATTCTGCCACTAGGCTGC  1081

seq1  CTTTTTGGAATTGAATTGAGAGAGTTCTACAGTTTGTTCTATAGTCATGT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGAATTGAATTGAGAGAGTTCTACAGTTTGTTCTATAGTCATGT  1131

seq1  TCCTTCCATCTTTCACATACCTATTTCCAAAAGGCAGCATCCTCCAGTCA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATCTTTCACATACCTATTTCCAAAAGGCAGCATCCTCCAGTCA  1181

seq1  GAGAATTC  1202
      ||||||||
seq2  GAGAATTC  1189