BAC Information

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BAC

Clone NameB6Ng01-203I07
Chromosome2 (Build37)
Map Location 40,502,195 - 40,503,349
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042604, Magmas-ps, LOC666531
Downstream geneLOC100042629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203I07.bB6Ng01-203I07.g
ACCGA023709GA023710
length1,1691,147
definitionB6Ng01-203I07.b B6Ng01-203I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaactaagtattattgaatggcttagaagcacctgaaaaaaaa
aaagttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctg
agatttcacctcacaccagtcagaatggctaagatcaaaaattcaggtga
cagcagatgctgatgaggatgtggagaaagaggaacactcctccattatt
ggtgggattgcaagcatgtacaactaatctggaaatcagtctggaagttc
ctcagaaaattggacatagtaatatcagaggatccagcaatacctctcct
gggcatatatccagaagatgttccaactggtaataagagcacatgctcta
ctatgttcatagcagcgttatttatagtagccagaagttggaaagaaccc
agatgtccctcagcagagaaatggatacagaaatgtcgtacatttacaca
atggagtactactcagctattaaaaacaatgaatttatgaaattcctagg
caaatggatggatctggagggtatcatcttgagtgaggtaacccaattaa
aaagaactcacatgatatgtactcactgagaagtggatattagcccagaa
actttaaataaccaagatacaatttttctaaacacatgaaactcaagaag
aacagagaccaaagtgtggacactttgccccttcttcgaattgggaacaa
aacacccatggagggagttacagagacaaagtttggagctgtgatgaaag
gatggaccatgtagagactgccatatccagggatccaccccataatcagc
atccaaacgctgacaccattgcatacactagcaagattttattgaaagga
cccagatgtagctgtctcttgtgagactatgccggggcctagcaaacaca
gaagtggatgctcacagtcagctaatggatggatcacagggcccccattg
aggagctagagaaagtacccaaggagctaaaggggctgcaaccctttagt
ggaacaacatatgaactaaccagtaaccccagagctcgtatttctagctg
catatgtagcagaagatgacctagtcggcatcatggaagagaggcccctg
ggtctgcaacctttttatgcccagtacaaggaacacccaagggcccagaa
ttgggagattggggtgtta

gaattctgtttctgtccagatatgtgaggatgagaccattaacacacaaa
ctgagctgtctctagttgtgcttcttaggagaggtaagggatggaaaaga
atcaagatccctacaggtttccaggagtagaaagaagggggaaagttaag
gatacaaatatggagatgattatagtagagagagtttgaatttaagctgg
gaaagaaaacagataaaatcttttaaaataggataaaaataatggaaaaa
ttattggagttaaagtgacaagaagacagtttaagaacctggaaaaaaaa
gggctgtagctaaaatgaagagaggagagagtataaatgtgaaccatagt
attacttaatgcaaacatcaaagcttgctgctggcaagctgagggaggac
actggtactcacagtactggcatctgtctccagtgtagtctgcctggcaa
tggcagtaaggctggttcccagcagtgacaacacagcttccaccattgtg
acaagagtcttcgcagactgccttgccgcagttgggcccagtaaagccca
gggcacagatacaggtgggtcttcctattggacaaaagaaacaaagctgt
gctgttaaccttaaatggaacttctgtagataaagttagggcacgaggtt
tctggcaaagttgtgtctacaatttctctctgactttattataccaaaag
ctcttcagtttcagttgagctgtatatccaaggaagtataaactaaacat
atctgacattcagttaggtcattttgcgagtgttttatgaataactgtac
ttctacattgtttttttttttttgctcatatatgtctactttttcaatta
tttttaacttatatatgatatcacagagtttactttgtataaaattcaga
ataatcataatttgtcattgttcattcagtgttcaccactgctggctata
cacaaaccatcagtgggatagtaacttcagcatgcatttaataaataaag
acaatatgttatagatattgttacaatattttatgagttttcttactagg
taaacatggagaacattaagtgtttatgcatacccactgggacctattta
tctagtctgaatgtttactcgggttaaaagtacctgttagcttacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_40502195_40503349
seq2: B6Ng01-203I07.g_61_1207

seq1  GAATTCTGTTTCTGTCCAGATATGTGAGGATGAGACCATTAACACACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCTGTCCAGATATGTGAGGATGAGACCATTAACACACAAA  50

seq1  CTGAGCTGTCTCTAGTTGTGCTTCTTAGGAGAGGTAAGGGATGGAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGTCTCTAGTTGTGCTTCTTAGGAGAGGTAAGGGATGGAAAAGA  100

seq1  ATCAAGATCCCTACAGGTTTCCAGGAGTAGAAAGAAGGGGGAAAGTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGATCCCTACAGGTTTCCAGGAGTAGAAAGAAGGGGGAAAGTTAAG  150

seq1  GATACAAATATGGAGATGATTATAGTAGAGAGAGTTTGAATTTAAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAATATGGAGATGATTATAGTAGAGAGAGTTTGAATTTAAGCTGG  200

seq1  GAAAGAAAACAGATAAAATCTTTTAAAATAGGATAAAAATAATGGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAACAGATAAAATCTTTTAAAATAGGATAAAAATAATGGAAAAA  250

seq1  TTATTGGAGTTAAAGTGACAAGAAGACAGTTTAAGAACCTGGAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGAGTTAAAGTGACAAGAAGACAGTTTAAGAACCTGGAAAAAAAA  300

seq1  GGGCTGTAGCTAAAATGAAGAGAGGAGAGAGTATAAATGTGAACCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTAGCTAAAATGAAGAGAGGAGAGAGTATAAATGTGAACCATAGT  350

seq1  ATTACTTAATGCAAACATCAAAGCTTGCTGCTGGCAAGCTGAGGGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTAATGCAAACATCAAAGCTTGCTGCTGGCAAGCTGAGGGAGGAC  400

seq1  ACTGGTACTCACAGTACTGGCATCTGTCTCCAGTGTAGTCTGCCTGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTACTCACAGTACTGGCATCTGTCTCCAGTGTAGTCTGCCTGGCAA  450

seq1  TGGCAGTAAGGCTGGTTCCCAGCAGTGACAACACAGCTTCCACCATTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTAAGGCTGGTTCCCAGCAGTGACAACACAGCTTCCACCATTGTG  500

seq1  ACAAGAGTCTTCGCAGACTGCCTTGCCGCAGTTGGGCCCAGTAAAGCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTCTTCGCAGACTGCCTTGCCGCAGTTGGGCCCAGTAAAGCCCA  550

seq1  GGGCACAGATACAGGTGGGTCTTCCTATTGGACAAAAGAAACAAAGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACAGATACAGGTGGGTCTTCCTATTGGACAAAAGAAACAAAGCTGT  600

seq1  GCTGTTAACCTTAAATGGAACTTCTGTAGATAAAGTTAGGGCACGAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAACCTTAAATGGAACTTCTGTAGATAAAGTTAGGGCACGAGGTT  650

seq1  TCTGGCAAAGTTGTGTCTACAATTTCTCTCTGACTTTATTATACCAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAAAGTTGTGTCTACAATTTCTCTCTGACTTTATTATACCAAAAG  700

seq1  CTCTTCAGTTTCAGTTGAGCTGTATATCCAAGGAAGTATAAACTAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGTTTCAGTTGAGCTGTATATCCAAGGAAGTATAAACTAAACAT  750

seq1  ATCTGACATTCAGTTAGGTCATTTTGCGAGTGTTTTATGAATAACTGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACATTCAGTTAGGTCATTTTGCGAGTGTTTTATGAATAACTGTAC  800

seq1  TTCTACATTG-TTTTTTTTTTTTGCTCATATATGTCTACTTTTTCAATTA  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATTGTTTTTTTTTTTTTGCTCATATATGTCTACTTTTTCAATTA  850

seq1  TTTTTAACTTATATATGATATCACAGAGTTTACTTTGTTATAAAATTCAG  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTTAACTTATATATGATATCACAGAGTTTACTTTG-TATAAAATTCAG  899

seq1  -ATAATCATAATTTGTCATTGTTCATTCAGTGTTCACCACTGCTGGCTAT  948
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCATAATTTGTCATTGTTCATTCAGTGTTCACCACTGCTGGCTAT  949

seq1  ACACAAACCATCAGT-GGATAAGTACTTCAGCATGCATTTTAATAAATAA  997
      ||||||||||||||| |||||   ||||||||||||| ||||||||||||
seq2  ACACAAACCATCAGTGGGATAGTAACTTCAGCATGCA-TTTAATAAATAA  998

seq1  AGACAATTATGTTATAGATAATTGTTAC-ATATTTTAATGAAGTTTTCTT  1046
      |||||| |||||||||||| |||||||| ||||||| ||| |||||||||
seq2  AGACAA-TATGTTATAGAT-ATTGTTACAATATTTT-ATG-AGTTTTCTT  1044

seq1  AACTTAAGTAAACATGGAG-ACATTTAGTGTTTAATGCATACCCACTGGG  1095
      |   || |||||||||||| ||||| ||||||| ||||||||||||||||
seq2  A--CTAGGTAAACATGGAGAACATTAAGTGTTT-ATGCATACCCACTGGG  1091

seq1  ACTTAATTTATCTAGTCTTGATGTTTACTCGTGTTTAAAAAATTACTGTG  1145
      || | |||||||||||||  ||||||||||| |||  |||| |  |||| 
seq2  ACCT-ATTTATCTAGTCTGAATGTTTACTCGGGTT--AAAAGTACCTGT-  1137

seq1  TAGCTTACTA  1155
      ||||||||||
seq2  TAGCTTACTA  1147


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