BAC Information

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BAC

Clone NameB6Ng01-204G02
Chromosome2 (Build37)
Map Location 21,902,611 - 22,042,224
singlet/doubletdoublet
Overlap geneLOC637235
Upstream geneLOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream geneMyo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204G02.bB6Ng01-204G02.g
ACCGA024342GA024343
length1,176835
definitionB6Ng01-204G02.b B6Ng01-204G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,041,070 - 22,042,224)(21,902,611 - 21,903,383)
sequence
gaattctctgtttagatctgttttatttttaattgggttattcattttct
taatattcgatttttttacttctttatatattttggatattagcctttta
ttggatgtgtagttgttaaaaatttttcccatttcataagatgctgcttt
gtccaaattatgtcattacatacatgggaatgtaaatttctgtgcgttta
taaaagctaaaatttagaaactatttaaatgctatctttacagagacaca
aaacccaagattatgcattactttagatgtttgttgtcttaattttcttt
ctattgctgtaataaacaccctgataaaaaacaacttgatttattttggc
ttaccactgtagtccattaagaagaggagtcttggctggaactcatagca
ggaaactagaagcaaggattgaagcagaggcagtggaagaatgctgctta
ctggctctctctgcatggcttgctcatgttgctttctgaaactgcccaag
acaaacctcagggtttgtccataggttaatctgatgggatcattttctca
attgaaggttccccttcccagatgaccctagcttgtatcaagttgacaaa
aaactagccagctcactgacccatcatcaaaacctttcttcattgtcttt
taggacagctttgaatacaaatcctgtttaatggaataagttttacactg
aatctttgtcttatctattcctcaaattcttagttgatacattcactcct
ttgtcttttccatccacaaagactttgtgagaacttttctctttttcaag
aatggtatgggactagatatagaaataatgagcaactgaagccccaagtc
tctgaaagaagttataaacagtggttaccatctatactttttagatggat
atagtcttaataaaatgctatctttccttttccttttttagttttctttt
ctttttcttgcttcctaagttctgcctcatccatctcttccccccttttg
cacctggatttagaagttcctgttcttcttttgccaccatctctatggga
atttcaacattcatacttgcaatggctgcatttatttagggatctttctt
gttaccacattaagatctggggacatctataacttcaatcaactgcatct
tcagttgttatcaagtccccttgttc
gaattcctcctttccaaagagaaaagaatcaataaccaaatagttatacc
atgcagaatcccccactctcccatgctggcatatcccaccaatcccaacc
aagctcttgagttctgtgccccatgaacacagaactagtaaattgcaggt
gagttaccagggtatggattgctgcagccccagggaaggttttcaatcct
tgtgtcaggcccagtgtcatgggaatgctccatgacaaagaatgactatg
gttttgacttgttaaatgaaactgtggtgcagggttgtggggtcccccat
ctgctctgccacagggtttggccacttggggaggcaggatgcaggaagtt
gactgcacttaccccacaacctaaccgggcagatgttgggccatagggaa
gcctgaggatactgtttggggggaggggaggaagcacagtctgaggcatg
ggacaactggagctggctcaggggtccctggacctgcaaagagaccagga
catgggatttccagtctcttggacatccaggcgccactggagatcttgga
agatctgagaacagaatctgggcccttgggctgcatctagcctgggctgg
aggagaaatggggagctctggctggtctcatgggtagagtccttgacttg
gtggtagttgtggctgggagtgcaaagaggccttctacaagagactagac
tgcagctctataggtgaaaggccttcttcatggctccccatggcagatcc
ttagataagagacattcccatgggttttaagacatttatttgttgtggtg
gaaaattgggaagtgtaaaaccataccccactttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_22041070_22042224
seq2: B6Ng01-204G02.b_45_1220 (reverse)

seq1  GAACAA--GGACTGGATAACAACTG-AGATGCAGTGTGATTGAAGTTATA  47
      ||||||  ||||| ||||||||||| ||||||||| ||||||||||||||
seq2  GAACAAGGGGACTTGATAACAACTGAAGATGCAGT-TGATTGAAGTTATA  49

seq1  G-TGTCCCAAGAACCTAATGT-GTAACAAGAAAGAT-CCTAAATAAATGC  94
      | |||||| ||| | |||||| |||||||||||||| |||||||||||||
seq2  GATGTCCCCAGATCTTAATGTGGTAACAAGAAAGATCCCTAAATAAATGC  99

seq1  AGCCATTGGCAAGTATGAATGTTGAAATT-CCATAGAGATTGTG--CAAA  141
      ||||||| ||||||||||||||||||||| |||||||||| |||   |||
seq2  AGCCATT-GCAAGTATGAATGTTGAAATTCCCATAGAGATGGTGGCAAAA  148

seq1  GAAG-ACAGG-ACTTCTAAATCCA-GTGCAAA---GGGGGAGAGATGGAT  185
      |||| ||||| ||||||||||||| |||||||   |||| ||||||||||
seq2  GAAGAACAGGAACTTCTAAATCCAGGTGCAAAAGGGGGGAAGAGATGGAT  198

seq1  GA-GCAGAAC-TAAGAAGCAAG-AAAAGAAAAGAAAACTAAAAAAGG-AA  231
      || ||||||| || |||||||| |||||||||||||||||||||||| ||
seq2  GAGGCAGAACTTAGGAAGCAAGAAAAAGAAAAGAAAACTAAAAAAGGAAA  248

seq1  AGGAAAGATAGCATTTTATTAAGACTATATCCATCT-AAAAGTATAGATG  280
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGAAAGATAGCATTTTATTAAGACTATATCCATCTAAAAAGTATAGATG  298

seq1  GTAACCACTGTTTATAACTTCTTTCAGAGACTTGGGGCTTCAGTTGCTCA  330
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCACTGTTTATAACTTCTTTCAGAGACTTGGGGCTTCAGTTGCTCA  348

seq1  TTA-TTCTATATCTAGT-CCATACCATTCTTGAAAAAGAG-AAAGTTCTC  377
      ||| ||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TTATTTCTATATCTAGTCCCATACCATTCTTGAAAAAGAGAAAAGTTCTC  398

seq1  ACAAAGTCTTTGTGGATGGAAAAGACAAAGGAGTGAATGTATCAACTAAG  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCTTTGTGGATGGAAAAGACAAAGGAGTGAATGTATCAACTAAG  448

seq1  AATTTGAGGAATAGATAAGACAAAGATTCAGTGTAAAACTTATTCCATTA  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGGAATAGATAAGACAAAGATTCAGTGTAAAACTTATTCCATTA  498

seq1  AACAGGATTTGTATTCAAAGCTGTCCTAAAAGACAATGAAGAAAGGTTTT  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATTTGTATTCAAAGCTGTCCTAAAAGACAATGAAGAAAGGTTTT  548

seq1  GATGATGGGTCAGTGAGCTGGCTAGTTTTTTGTCAACTTGATACAAGCTA  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGGGTCAGTGAGCTGGCTAGTTTTTTGTCAACTTGATACAAGCTA  598

seq1  GGGTCATCTGGGAAGGGGAACCTTCAATTGAGAAAATGATCCCATCAGAT  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATCTGGGAAGGGGAACCTTCAATTGAGAAAATGATCCCATCAGAT  648

seq1  TAACCTATGGACAAACCCTGAGGTTTGTCTTGGGCAGTTTCAGAAAGCAA  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTATGGACAAACCCTGAGGTTTGTCTTGGGCAGTTTCAGAAAGCAA  698

seq1  CATGAGCAAGCCATGCAGAGAGAGCCAGTAAGCAGCATTCTTCCACTGCC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAAGCCATGCAGAGAGAGCCAGTAAGCAGCATTCTTCCACTGCC  748

seq1  TCTGCTTCAATCCTTGCTTCTAGTTTCCTGCTATGAGTTCCAGCCAAGAC  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCAATCCTTGCTTCTAGTTTCCTGCTATGAGTTCCAGCCAAGAC  798

seq1  TCCTCTTCTTAATGGACTACAGTGGTAAGCCAAAATAAATCAAGTTGTTT  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTTAATGGACTACAGTGGTAAGCCAAAATAAATCAAGTTGTTT  848

seq1  TTTATCAGGGTGTTTATTACAGCAATAGAAAGAAAATTAAGACAACAAAC  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGGGTGTTTATTACAGCAATAGAAAGAAAATTAAGACAACAAAC  898

seq1  ATCTAAAGTAATGCATAATCTTGGGTTTTGTGTCTCTGTAAAGATAGCAT  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAGTAATGCATAATCTTGGGTTTTGTGTCTCTGTAAAGATAGCAT  948

seq1  TTAAATAGTTTCTAAATTTTAGCTTTTATAAACGCACAGAAATTTACATT  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGTTTCTAAATTTTAGCTTTTATAAACGCACAGAAATTTACATT  998

seq1  CCCATGTATGTAATGACATAATTTGGACAAAGCAGCATCTTATGAAATGG  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTATGTAATGACATAATTTGGACAAAGCAGCATCTTATGAAATGG  1048

seq1  GAAAAATTTTTAACAACTACACATCCAATAAAAGGCTAATATCCAAAATA  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTTTAACAACTACACATCCAATAAAAGGCTAATATCCAAAATA  1098

seq1  TATAAAGAAGTAAAAAAATCGAATATTAAGAAAATGAATAACCCAATTAA  1127
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAAGTAAAAAAATCGAATATTAAGAAAATGAATAACCCAATTAA  1148

seq1  AAATAAAACAGATCTAAACAGAGAATTC  1155
      ||||||||||||||||||||||||||||
seq2  AAATAAAACAGATCTAAACAGAGAATTC  1176

seq1: chr2_21902611_21903383
seq2: B6Ng01-204G02.g_66_841

seq1  GAATTCCTCCTTTCCAAAGAGAAAAGAATCAATAACCAAATAGTTATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTTTCCAAAGAGAAAAGAATCAATAACCAAATAGTTATACC  50

seq1  ATGCAGAATCCCCCACTCTCCCATGCTGGCATATCCCACCAATCCCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAATCCCCCACTCTCCCATGCTGGCATATCCCACCAATCCCAACC  100

seq1  AAGCTCTTGAGTTCTGTGCCCCATGAACACAGAACTAGTAAATTGCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTGAGTTCTGTGCCCCATGAACACAGAACTAGTAAATTGCAGGT  150

seq1  GAGTTACCAGGGTATGGATTGCTGCAGCCCCAGGGAAGGTTTTCAATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACCAGGGTATGGATTGCTGCAGCCCCAGGGAAGGTTTTCAATCCT  200

seq1  TGTGTCAGGCCCAGTGTCATGGGAATGCTCCATGACAAAGAATGACTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGGCCCAGTGTCATGGGAATGCTCCATGACAAAGAATGACTATG  250

seq1  GTTTTGACTTGTTAAATGAAACTGTGGTGCAGGGTTGTGGGGTCCCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGACTTGTTAAATGAAACTGTGGTGCAGGGTTGTGGGGTCCCCCAT  300

seq1  CTGCTCTGCCACAGGGTTTGGCCACTTGGGGAGGCAGGATGCAGGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGCCACAGGGTTTGGCCACTTGGGGAGGCAGGATGCAGGAAGTT  350

seq1  GACTGCACTTACCCCACAACCTAACCGGGCAGATGTTGGGCCATAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCACTTACCCCACAACCTAACCGGGCAGATGTTGGGCCATAGGGAA  400

seq1  GCCTGAGGATACTGTTTGGGGGGAGGGGAGGAAGCACAGTCTGAGGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGATACTGTTTGGGGGGAGGGGAGGAAGCACAGTCTGAGGCATG  450

seq1  GGACAACTGGAGCTGGCTCAGGGGTCCCTGGACCTGCAAAGAGACCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACTGGAGCTGGCTCAGGGGTCCCTGGACCTGCAAAGAGACCAGGA  500

seq1  CATGGGATTTCCAGTCTCTTGGACATCCAGGCGCCACTGGAGATCTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGATTTCCAGTCTCTTGGACATCCAGGCGCCACTGGAGATCTTGGA  550

seq1  AGATCTGAGAACAGAATCTGGGCCCTTGGGCTGCATCTAGCCTGGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGAGAACAGAATCTGGGCCCTTGGGCTGCATCTAGCCTGGGCTGG  600

seq1  AGGAGAAATGGGGAGCTCTGGCTGGTCTCATGGGTAGAGTCCTTGACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATGGGGAGCTCTGGCTGGTCTCATGGGTAGAGTCCTTGACTTG  650

seq1  GTGGTAGTTGTGGCTGGGAGTGCAAAGAGGCCTTCTACAAGAGACTAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGTTGTGGCTGGGAGTGCAAAGAGGCCTTCTACAAGAGACTAGAC  700

seq1  TGCAGCTCTATAGGTG-AAGGCCTTCTTCATGGCTCCCCATGGCAGATCC  749
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTATAGGTGAAAGGCCTTCTTCATGGCTCCCCATGGCAGATCC  750

seq1  -TAGATAAGAGACATT-CCATGGTTT  773
       ||||||||||||||| |||||| ||
seq2  TTAGATAAGAGACATTCCCATGGGTT  776