BAC Information

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BAC

Clone NameB6Ng01-206A21
Chromosome2 (Build37)
Map Location 80,512,677 - 80,679,238
singlet/doubletdoublet
Overlap geneLOC103324
Upstream genePpp1r1c, Pde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35
Downstream geneLOC668027, LOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206A21.bB6Ng01-206A21.g
ACCGA025569GA025570
length966363
definitionB6Ng01-206A21.b B6Ng01-206A21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,512,677 - 80,513,639)(80,678,870 - 80,679,238)
sequence
gaattcattggcttcacaaccatatgactaaggggttaatttactaaaca
tgaaaggggacagtccatacccattcttgttctgttcagtatgtcaactt
tctagcccgtttggtgaagctgtgattccctacaacccatttgacatgtt
ctcagtaaggctgtagagttggcaacctaagagccctgaccgtcacacct
gttttctagtatgaactgaggggttcctcttcccagaggaaaaaggttgt
tacgggttaaacagctatgagcaaaacccgagcaaggccaggctggcctt
tgacctagagacctgacctttaagagagaatgcataaacagcctaaacac
agccagttggtaggtattttcagtttgcagtttaggtagcagtaaagcgt
gtttgctgatttgctatatttgtaaagtttgtgcctttttaaaagtaatc
gcttcagtatagaatgactaagatggtaatgccactaaaaccaggtgggg
agtgcggctaaaagtaggatgaaatgctggcatgaaaagtcacccgggga
gttccataccagttatattagctacacttctctaaagtgcatgggcaaat
agaaaacacggaatgtagttattactgtttgtgttgtgtggaaggaatcg
gctcttaggacattgaatccgttgcaattctattttgatgcaagtctatt
gttatttagaatcatacccagattatctatctattgagtgttttcttcta
cagtgtaacaaatgcacacatccatgcagtcaggttaagcagctgggttc
agtagccagaagaaaagtaggatgtagcgctctgaaaaacccgctaggaa
actgaaggagcctgcttcttctggctcctaaatgtgtggaagtaagtagt
cagacatggggttctgacttctcagaaggtggtaggcaagccaaggacaa
tctcagataaatgagc
tttaatgtaagaactggtaaccatgtgagtaattcaagggagatgtagac
agttgtttatgtcatcttaagctggagaagtccttcccagcatggtgtat
atgaaggaatctaaaaaggagaccatcatgagattatagacatatattta
ttcatggctgcagttactgttattaagaaaactctgtgacacttggtaaa
gtgccacttcacaagtagtcagtgtaaaacaaaacaaaagtaataaaact
catgacaatatatgtgactctcaacagatcggtatctctaatttagaaaa
tatttttttttttggacttctgcggcttttatttttgcatgtaaaccact
ggggggaggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80512677_80513639
seq2: B6Ng01-206A21.b_47_1012

seq1  GAATTCATTGGCTTCACAACCATATGACTAAGGGGTTAATTTACTAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGCTTCACAACCATATGACTAAGGGGTTAATTTACTAAACA  50

seq1  TGAAAGGGGACAGTCCATACCCATTCTTGTTCTGTTCAGTATGTCAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGGACAGTCCATACCCATTCTTGTTCTGTTCAGTATGTCAACTT  100

seq1  TCTAGCCCGTTTGGTGAAGCTGTGATTCCCTACAACCCATTTGACATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCCCGTTTGGTGAAGCTGTGATTCCCTACAACCCATTTGACATGTT  150

seq1  CTCAGTAAGGCTGTAGAGTTGGCAACCTAAGAGCCCTGACCGTCACACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAAGGCTGTAGAGTTGGCAACCTAAGAGCCCTGACCGTCACACCT  200

seq1  GTTTTCTAGTATGAACTGAGGGGTTCCTCTTCCCAGAGGAAAAAGGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAGTATGAACTGAGGGGTTCCTCTTCCCAGAGGAAAAAGGTTGT  250

seq1  TACGGGTTAAACAGCTATGAGCAAAACCCGAGCAAGGCCAGGCTGGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGTTAAACAGCTATGAGCAAAACCCGAGCAAGGCCAGGCTGGCCTT  300

seq1  TGACCTAGAGACCTGACCTTTAAGAGAGAATGCATAAACAGCCTAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAGAGACCTGACCTTTAAGAGAGAATGCATAAACAGCCTAAACAC  350

seq1  AGCCAGTTGGTAGGTATTTTCAGTTTGCAGTTTAGGTAGCAGTAAAGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTTGGTAGGTATTTTCAGTTTGCAGTTTAGGTAGCAGTAAAGCGT  400

seq1  GTTTGCTGATTTGCTATATTTGTAAAGTTTGTGCCTTTTTAAAAGTAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGATTTGCTATATTTGTAAAGTTTGTGCCTTTTTAAAAGTAATC  450

seq1  GCTTCAGTATAGAATGACTAAGATGGTAATGCCACTAAAACCAGGTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTATAGAATGACTAAGATGGTAATGCCACTAAAACCAGGTGGGG  500

seq1  AGTGCGGCTAAAAGTAGGATGAAATGCTGGCATGAAAAGTCACCCGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGGCTAAAAGTAGGATGAAATGCTGGCATGAAAAGTCACCCGGGGA  550

seq1  GTTCCATACCAGTTATATTAGCTACACTTCTCTAAAGTGCATGGGCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATACCAGTTATATTAGCTACACTTCTCTAAAGTGCATGGGCAAAT  600

seq1  AGAAAACACGGAATGTAGTTATTACTGTTTGTGTTGTGTGGAAGGAATCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACGGAATGTAGTTATTACTGTTTGTGTTGTGTGGAAGGAATCG  650

seq1  GCTCTTAGGACATTGAATCCGTTGCAATTCTATTTTGATGCAAGTCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAGGACATTGAATCCGTTGCAATTCTATTTTGATGCAAGTCTATT  700

seq1  GTTATTTAGAATCATACCCAGATTATCTATCTATTGAGTGTTTTCTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTAGAATCATACCCAGATTATCTATCTATTGAGTGTTTTCTTCTA  750

seq1  CAGTGTAACAAATGCACACATCCATGCAGTCAGGTTAAGCAGCTGGGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAACAAATGCACACATCCATGCAGTCAGGTTAAGCAGCTGGGTTC  800

seq1  AGTAGCCAGAAGAAAAGTAGGATGTAGCGCTCTGAAAAACCCGCTAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCAGAAGAAAAGTAGGATGTAGCGCTCTGAAAAACCCGCTAGGAA  850

seq1  ACTGAAGGAGCCTGCTTCTTCTGGCTCCTAAATGTGTGGAAGTAAGTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGAGCCTGCTTCTTCTGGCTCCTAAATGTGTGGAAGTAAGTAGT  900

seq1  CAGACATGGGGTTCTGACTTCTCAG-AGGTGGTAGGC-AGCCAA-GACAA  947
      ||||||||||||||||||||||||| ||||||||||| |||||| |||||
seq2  CAGACATGGGGTTCTGACTTCTCAGAAGGTGGTAGGCAAGCCAAGGACAA  950

seq1  TCTCAAATAAATGAGC  963
      ||||| ||||||||||
seq2  TCTCAGATAAATGAGC  966

seq1: chr2_80678870_80679238
seq2: B6Ng01-206A21.g_67_435 (reverse)

seq1  TCCCCCTCCCCCCAGTGGTTTACATGCAAAAATAAAAGCCGCAGAAGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTCCCCCCAGTGGTTTACATGCAAAAATAAAAGCCGCAGAAGTCC  50

seq1  AAAAAAAAAAATATTTTCTAAATTAGAGATACCGATCTGTTGAGAGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAATATTTTCTAAATTAGAGATACCGATCTGTTGAGAGTCAC  100

seq1  ATATATTGTCATGAGTTTTATTACTTTTGTTTTGTTTTACACTGACTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGTCATGAGTTTTATTACTTTTGTTTTGTTTTACACTGACTACT  150

seq1  TGTGAAGTGGCACTTTACCAAGTGTCACAGAGTTTTCTTAATAACAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGTGGCACTTTACCAAGTGTCACAGAGTTTTCTTAATAACAGTAA  200

seq1  CTGCAGCCATGAATAAATATATGTCTATAATCTCATGATGGTCTCCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCCATGAATAAATATATGTCTATAATCTCATGATGGTCTCCTTTT  250

seq1  TAGATTCCTTCATATACACCATGCTGGGAAGGACTTCTCCAGCTTAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCCTTCATATACACCATGCTGGGAAGGACTTCTCCAGCTTAAGAT  300

seq1  GACATAAACAACTGTCTACATCTCCCTTGAATTACTCACATGGTTACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAACAACTGTCTACATCTCCCTTGAATTACTCACATGGTTACCAG  350

seq1  TTCTTACATTAAAGAATTC  369
      |||||||||||||||||||
seq2  TTCTTACATTAAAGAATTC  369