BAC Information

Click to search

BAC

Clone NameB6Ng01-206H10
Chromosome2 (Build37)
Map Location 46,025,351 - 46,026,521
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream geneLOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206H10.bB6Ng01-206H10.g
ACCGA025871GA025872
length1,1471,206
definitionB6Ng01-206H10.b B6Ng01-206H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaccttagtgtgaggcagaatataccaaaaaatgcagatatgt
gcacagccacaagtgtgccgcagatttccccaacactactttattatttt
aaatacacaaataaccacaaaacattacacatgcatatggaaagcccaga
aaaggcatcgatacagtgactggcttaaattgttaaggaaaggtgatttt
attacagtattgttaaacatcccataatttcccccttaacctttattgcg
gctttatttctatggccatcatgtacctatatattcctccagaggctgct
tctttctcacctacggatcttcatcttctacatgtgtctctattgctata
gatgcaaaagcctgttatcagaatgtgtggccttttcctcatcagactgc
ttgttgctctcctagaggaccagtatttggtttccagtgtcatgtgaatg
gcttacaatcactggcaactccacaccaggtgacttctccagagagaagt
gaggagcattttagagagattcgcaattgctactgtgcacaaaggttatt
tacaagcattgtgctacttcaagagtcaaattgataaccacaaattagtg
acaggcaatttatatagccgaactatattcagaattatgaatgattcaca
cctctaagagattggagaacagctaaagatgacttcttcagcctgtacag
aatgaagtatgctatatacagaaacaatttcaaatttagaaaattttatt
tctggcatttttcatttaatatcttcttaccatatttaaacatagataac
agacacagtataaagtatcagcataaattaggaagactgctaaagacacc
actacacacacatacacacatgcacactccagagatgcttgggtatatta
ttatttgggttggtagaaatcttgattatctatttttagtaatattttgt
tatttgtacagtacctgcaacttcaatctgtgatgctttcgcctgtaagt
actttctatagtcaaagaaatgccaatgcttgttttcagatatgtgcaag
catccaaagtgtagtgactaaaatgtgacagaatcactgttctgacgtag
ctctggcatgtctgtgtagcgaggcatgtgatgaggtgcatgatagt

gaattctttgtttatctctgaaccccattttaatggtgttatttggtttt
ctggagtccaattccttgagttgtttatatatattagatattaaccccct
atcagatttaggattggtaaagatattttcccaaactgttggttgccttt
ttgtcttattgacagtgtcctttaacttacagaagctttccaattttacg
aggttccatttgtctattcttgatcttacagcacaagccattaattttct
tttcaggatttttttttccctgtgctcatatctttgaggctcttctccac
tttcccctgtatacatttcactgtctctggtttatgtggagttcctcgat
ccacttagacttgagctttgtataaggaaataagaatgtatcaattggcg
ttcttctacataataactgccagtggagccagcactatttgttgaaaatg
cttccccccgccccattggatggttttagctcctttatcaaagatcaagt
gaccataggtgtgtgggttcttttctcagtcttcaattctattccattga
tctacatttctgtcactgtaccagtaccatgcagtttttatcacaattgc
tctgtagtacagcttgaggtcaggcactgtgattctaccagaggttcttt
tattattgagaataatttttgctatccaattttttgtttttccagatgaa
tttgcaaattgtcctttttaactctgtgaagaattgagttggaattttga
tagggatgacattgactctatagattgctttcagcaagctaccaattttt
actatattaatcctgccaatccatgagcatgggagatctttccattttct
gagatctttttcagtttctttcttcagagacttgaagtttttatcataca
gatctttcacatccttagagtcacaccaatgtatttttatattattttta
actattttgaaggtgatgttccctaatttctttctcagcctgttatcctt
tgtgtagaagaaaggccacctgatttcatgagttaatttatgtccagcta
cacatgatcagctcatagatgatgagaaagcactgacaaattcaacacct
tgttcaatgtaaggtctgaggatcagccatcaagataatctacatgttgc
ctaacgacagcgttagccaacctcaccttgcatgtgcaagaaaacttcta
gacgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46025351_46026521
seq2: B6Ng01-206H10.b_45_1191

seq1  GAATTCACACCTTAGTGTGAGGCAGAATATACCAAAAAATGCAGATATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCTTAGTGTGAGGCAGAATATACCAAAAAATGCAGATATGT  50

seq1  GCACAGCCACAAGTGTGCCGCAGATTTCCCCAACACTACTTTATTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCCACAAGTGTGCCGCAGATTTCCCCAACACTACTTTATTATTTT  100

seq1  AAATACACAAATAACCACAAAACATTACACATGCATATGGAAAGCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACAAATAACCACAAAACATTACACATGCATATGGAAAGCCCAGA  150

seq1  AAAGGCATCGATACAGTGACTGGCTTAAATTGTTAAGGAAAGGTGATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATCGATACAGTGACTGGCTTAAATTGTTAAGGAAAGGTGATTTT  200

seq1  ATTACAGTATTGTTAAACATCCCATAATTTCCCCCTTAACCTTTATTGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTATTGTTAAACATCCCATAATTTCCCCCTTAACCTTTATTGCG  250

seq1  GCTTTATTTCTATGGCCATCATGTACCTATATATTCCTCCAGAGGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTTCTATGGCCATCATGTACCTATATATTCCTCCAGAGGCTGCT  300

seq1  TCTTTCTCACCTACGGATCTTCATCTTCTACATGTGTCTCTATTGCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCACCTACGGATCTTCATCTTCTACATGTGTCTCTATTGCTATA  350

seq1  GATGCAAAAGCCTGTTATCAGAATGTGTGGCCTTTTCCTCATCAGACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAAAGCCTGTTATCAGAATGTGTGGCCTTTTCCTCATCAGACTGC  400

seq1  TTGTTGCTCTCCTAGAGGACCAGTATTTGGTTTCCAGTGTCATGTGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCTCTCCTAGAGGACCAGTATTTGGTTTCCAGTGTCATGTGAATG  450

seq1  GCTTACAATCACTGGCAACTCCACACCAGGTGACTTCTCCAGAGAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAATCACTGGCAACTCCACACCAGGTGACTTCTCCAGAGAGAAGT  500

seq1  GAGGAGCATTTTAGAGAGATTCGCAATTGCTACTGTGCACAAAGGTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCATTTTAGAGAGATTCGCAATTGCTACTGTGCACAAAGGTTATT  550

seq1  TACAAGCATTGTGCTACTTCAAGAGTCAAATTGATAACCACAAATTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCATTGTGCTACTTCAAGAGTCAAATTGATAACCACAAATTAGTG  600

seq1  ACAGGCAATTTATATAGCCGAACTATATTCAGAATTATGAATGATTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAATTTATATAGCCGAACTATATTCAGAATTATGAATGATTCACA  650

seq1  CCTCTAAGAGATTGGAGAACAGCTAAAGATGACTTCTTCAGCCTGTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGAGATTGGAGAACAGCTAAAGATGACTTCTTCAGCCTGTACAG  700

seq1  AATGAAGTATGCTATATACAGAAACAATTTCAAATTTAGAAAATTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTATGCTATATACAGAAACAATTTCAAATTTAGAAAATTTTATT  750

seq1  TCTGGCATTTTTCATTTAATATCTTCTTACCATATTTAAACATAGATAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTTTTCATTTAATATCTTCTTACCATATTTAAACATAGATAAC  800

seq1  AGACACAGTATAAAGTATCAGCATAAATTAGGAAGACTGCTAAAGACACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGTATAAAGTATCAGCATAAATTAGGAAGACTGCTAAAGACACC  850

seq1  ACTACACACACATACACACATGCACACTCCAGAGATGCTTGGGTATATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACACACATACACACATGCACACTCCAGAGATGCTTGGGTATATTA  900

seq1  TTATTTGGGTTGGTAGAAATCTTGATTATCTATTTTTAGTAATATTTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGGTTGGTAGAAATCTTGATTATCTATTTTTAGTAATATTTTGT  950

seq1  TATTTGTACAGTACCTGCAACTTCAATCTGTTGATGCTTTCGCCTGTAAG  1000
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TATTTGTACAGTACCTGCAACTTCAATCTG-TGATGCTTTCGCCTGTAAG  999

seq1  TTACTTTTCTTATAGGTCAAAGAAAATGCCAATGCTTTGTTTTTCAGATT  1050
       ||||||   |||| ||||||| ||||||||||||||   |||||||| |
seq2  -TACTTT--CTATA-GTCAAAG-AAATGCCAATGCTT--GTTTTCAGA-T  1041

seq1  ATGGTTGCCAAGCCATCCCAAAGGTGTTAGTGACTTAAAATGTGAACAGA  1100
      |||  || |||| |||||  || ||| ||||||| ||||||||| |||| 
seq2  ATG--TG-CAAG-CATCC--AAAGTG-TAGTGAC-TAAAATGTG-ACAG-  1081

seq1  AATCACTGTTCTGACAGTAGCTCTTGCAATGTCTGTGTAGCCAAAGCAAT  1150
      ||||||||||||||| |||||||| || |||||||||||||   ||  ||
seq2  AATCACTGTTCTGAC-GTAGCTCTGGC-ATGTCTGTGTAGC--GAGGCAT  1127

seq1  GTGATGAGGTGCATGAGTAGT  1171
      |||||||||||||||| ||||
seq2  GTGATGAGGTGCATGA-TAGT  1147


| Home | SequenceCutter | Blast | Download |