BAC Information

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BAC

Clone NameB6Ng01-208L15
Chromosome2 (Build37)
Map Location 99,634,436 - 99,635,543
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386
Downstream geneLOC668702, LOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208L15.bB6Ng01-208L15.g
ACCGA027528GA027529
length1,1901,113
definitionB6Ng01-208L15.b B6Ng01-208L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccccaggaataccgaaaggctgagaagcacctgagaaaatg
ttcaacatccttaatcatcagggacatacaaatcaaaacaaccctgatat
tccatctcataccagtcagaatggctaagatgaaaaattcaagtgacagc
agatgctgacgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcactctgatggttcctct
gaaaattggacatagtactacaggaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccttcaacagaggaatggatacaaaaaacgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacatggagggcatcattctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattagcccagaaac
ttagtatagcgagatataaggtacaatatgcaaaatacatgaaactgaag
aactaagaccaaagtgtggacactttgctccttcttagaattggaaacaa
tcacccatggaaggagttacagagcaaagtttggagctgagacaaaagga
tggaccatctagagactgccatatccagggatccatcccataattagcct
ccaaacgatgacaccattgcatacactagcaagcctttgttgcaaggacc
gtgatatttgctgtctcttgtgagactaggctggggcctagcaacacaga
ggtgggatgctcacagtcaactcttggatggatcatagggcccccaatgg
aggagctagagaaagtatccaaagagctaaagagtctgcaaccctattgt
ggaacaacattatgaactaaccagtaccccagagctcttgacctctagct
tgcatatgtatcaaaagatggctagtcggcatcatgggaaagaaggccaa
tgtcaagcaactttaattgccccagttaaaggcaatatccaggctcaaaa
ttgcactggtggcgtgcgttaatcgcatgcactcgctgtc
gaattcacagatcacaactaagaagtgtttaatcctctgtatcttgtatg
tggcaacaaaccctactgcctagaattgagactcacagtgtgttctttag
tcggtagaatgtacaaacttggtgactagcaagatttacaaataaattca
gcatggcctgacatacaaatgaacaattaaaatccacatccctttgtggt
atagttggatggccactcttttctcaaacacttctcaaagtgtaggcata
tcttctgagatttcaaaattatttgggttgtttttctttcctcagaaagg
aaaggaattgcaaacccctttaattccttcagtcctttctctaactcctc
tattcgggaccctgtgcacagtccaatggttggctgtgagcatcctcctc
tgtatttgtaaggctctggcagagcctctcagaagacagctatatcaggc
tcctgtcagcatgcacttcttgccattaacaatagtgtctggatttggta
acaatatcagccaatcagataccccagagttccaaggaactaagccatca
accaaggagtacacatggctccagttgcaaatgtagtagatgatgacctt
gtcaggtttcaatgagagaagaggtccttgatcctttgaaggcttgatag
atgccccagtgttggggcatagaggccaggaaagtaggagtgtgcatggg
tggagaaacaccatcatagaagcagggggcagggggaggaaatgataggg
tgcttccaggagggagggaaactgggaacggagataacatttaaaatgta
aataaagaaaatatccaataaaaaataaggaaagggaaaactagagatta
atttattattcagaataccaggatttaatttataactctgaagttcactg
aagattttcatatacagcagtctcagctcactggctagtgaacaaaatct
gtttctcctattttttttttttcagaaaacaaatatcatggtgcatcatc
ttttaagcccagctagggaaagcctatgttagcttggaaataagttttgt
ttattgatgagtagagctgctgagtggaatgcctgatcttctggtcatgg
gtgtttacagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99634436_99635543
seq2: B6Ng01-208L15.g_67_1179 (reverse)

seq1  ACTCTGTAAACACCCATGACCAGAAGGATCAGGCATTCCAACTCAGCAGC  50
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  ACTCTGTAAACACCCATGACCAGAA-GATCAGGCATTCC-ACTCAGCAGC  48

seq1  TCTACTTCATCA--TAACAAAACTTATTT-CAAGCTACATTAGGC-TTCC  96
      ||||| ||||||   |||||||||||||| |||||||   ||||| ||||
seq2  TCTAC-TCATCAATAAACAAAACTTATTTCCAAGCTAACATAGGCTTTCC  97

seq1  CTAGCTGGGCT--AAAGATGATGCCACCATGATATTTG-TTTCTG--AAA  141
      |||||||||||  |||||||||| |||||||||||||| ||||||  |||
seq2  CTAGCTGGGCTTAAAAGATGATG-CACCATGATATTTGTTTTCTGAAAAA  146

seq1  GAAAAAATAGGAGAAACAGATTTTGTTCACTAGCCAGTGAGCTGAGACTG  191
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAGGAGAAACAGATTTTGTTCACTAGCCAGTGAGCTGAGACTG  196

seq1  CTGTATATGAAAATCTTCAGTGAACTTCAGAGTTATAAATTAAATCCTGG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATGAAAATCTTCAGTGAACTTCAGAGTTATAAATTAAATCCTGG  246

seq1  TATTCTGAATAATAAATTAATCTCTAGTTTTCCCTTTCCTTATTTTTTAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAATAATAAATTAATCTCTAGTTTTCCCTTTCCTTATTTTTTAT  296

seq1  TGGATATTTTCTTTATTTACATTTTAAATGTTATCTCCGTTCCCAGTTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTTCTTTATTTACATTTTAAATGTTATCTCCGTTCCCAGTTTC  346

seq1  CCTCCCTCCTGGAAGCACCCTATCATTTCCTCCCCCTGCCCCCTGCTTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCTGGAAGCACCCTATCATTTCCTCCCCCTGCCCCCTGCTTCT  396

seq1  ATGATGGTGTTTCTCCACCCATGCACACTCCTACTTTCCTGGCCTCTATG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGTGTTTCTCCACCCATGCACACTCCTACTTTCCTGGCCTCTATG  446

seq1  CCCCAACACTGGGGCATCTATCAAGCCTTCAAAGGATCAAGGACCTCTTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACACTGGGGCATCTATCAAGCCTTCAAAGGATCAAGGACCTCTTC  496

seq1  TCTCATTGAAACCTGACAAGGTCATCATCTACTACATTTGCAACTGGAGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGAAACCTGACAAGGTCATCATCTACTACATTTGCAACTGGAGC  546

seq1  CATGTGTACTCCTTGGTTGATGGCTTAGTTCCTTGGAACTCTGGGGTATC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTACTCCTTGGTTGATGGCTTAGTTCCTTGGAACTCTGGGGTATC  596

seq1  TGATTGGCTGATATTGTTACCAAATCCAGACACTATTGTTAATGGCAAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGCTGATATTGTTACCAAATCCAGACACTATTGTTAATGGCAAGA  646

seq1  AGTGCATGCTGACAGGAGCCTGATATAGCTGTCTTCTGAGAGGCTCTGCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGCTGACAGGAGCCTGATATAGCTGTCTTCTGAGAGGCTCTGCC  696

seq1  AGAGCCTTACAAATACAGAGGAGGATGCTCACAGCCAACCATTGGACTGT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTACAAATACAGAGGAGGATGCTCACAGCCAACCATTGGACTGT  746

seq1  GCACAGGGTCCCGAATAGAGGAGTTAGAGAAAGGACTGAAGGAATTAAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGTCCCGAATAGAGGAGTTAGAGAAAGGACTGAAGGAATTAAAG  796

seq1  GGGTTTGCAATTCCTTTCCTTTCTGAGGAAAGAAAAACAACCCAAATAAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCAATTCCTTTCCTTTCTGAGGAAAGAAAAACAACCCAAATAAT  846

seq1  TTTGAAATCTCAGAAGATATGCCTACACTTTGAGAAGTGTTTGAGAAAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATCTCAGAAGATATGCCTACACTTTGAGAAGTGTTTGAGAAAAG  896

seq1  AGTGGCCATCCAACTATACCACAAAGGGATGTGGATTTTAATTGTTCATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCATCCAACTATACCACAAAGGGATGTGGATTTTAATTGTTCATT  946

seq1  TGTATGTCAGGCCATGCTGAATTTATTTGTAAATCTTGCTAGTCACCAAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCAGGCCATGCTGAATTTATTTGTAAATCTTGCTAGTCACCAAG  996

seq1  TTTGTACATTCTACCGACTAAAGAACACACTGTGAGTCTCAATTCTAGGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATTCTACCGACTAAAGAACACACTGTGAGTCTCAATTCTAGGC  1046

seq1  AGTAGGGTTTGTTGCCACATACAAGATACAGAGGATTAAACACTTCTTAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGGTTTGTTGCCACATACAAGATACAGAGGATTAAACACTTCTTAG  1096

seq1  TTGTGATCTGTGAATTC  1108
      |||||||||||||||||
seq2  TTGTGATCTGTGAATTC  1113