BAC Information

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BAC

Clone NameB6Ng01-209H11
Chromosome2 (Build37)
Map Location 88,459,672 - 88,460,854
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277
Downstream geneOlfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209H11.bB6Ng01-209H11.g
ACCGA028076GA028077
length1,1841,157
definitionB6Ng01-209H11.b B6Ng01-209H11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctagccagagcaattagacaagaggagatcaaggggatacaaac
tggaaaggaagaagtcaaaatatcactatttcagacattatgatagtata
taagtgaccctaaaaattccaccagagaacacctgaacctgataaacagc
ttcagtgaactagctggatataaaattaactcaaacaagtcaatggtctt
tctctacacaaaggataaacaggctgagaaagaaattagggaaacaagac
cattcacaatagtcacaaataatataaaataccttggtgtgagtctaact
aaggaagtgaaagatctgtatgacaagaatttcaactctctgaagaaaga
aatcaaagaagatctcagaaaatggaaagatctcccatgttcattcattg
gcaggatcaatagagtcaaaatgactatcttgccaaaagcaatctacaga
ttcaatgcaatccccatcaaaattccaactcaattcttcactgagttaga
aagggcaatttgtaaattcatctggaataacaaaaaaaactataatacca
aaaactattttcaacaataaaagaacctctggtggaatcaccatacctga
cctcaagctatactacagagcaattgtgataaaaactgcatgggactggt
acagtaaccgacagatagaataatggaaaagcattaagacccaaaaaatg
aacccacacatctatggtcacttgatctttgacaagggagctaaaaccat
ccggtggaaaaaagacagcattttcaacaaatggtgcaggctcaactggt
ggctatcatgtaaagaatgtgaattgatctgttcttagctacttggacaa
agctcaagtctaagtggaccaagaaactccatgtaaaaccagagacacta
aaacttatagagcagaaagtggggaaaagcctcgaatatatgggccacag
ggaaaattactgaacagaacaacaatgacttgtgctgtagatcgagaatc
acaaattggacctcataaattgcaagcttcttgtaagcaaaagatactgt
caagagacaaaagctaccaacagtgaaaagatctttacaaatctagtctg
aataggtctaatatctaatatatacatggactcagatctgacttccggaa
tgatacctatttaaaattggctatagagaggccc
gaattcatcatcatctctttataagtcctgtccaaagtcaagaaaaaaga
agagataaattgagcactaattttgtcttatccaactttaaattttatat
acatgtttgtatgcatcaagtaaatataatttttctgaatttcaattcca
attgaattttccatttcatttaaaatgggattataaattaatttaaagtc
tgttcatgaattatgaactgaatcagttcttagatctataaccagctctg
gaaaatcatagatgcactttcttacaaggtttgaggtagcaatatctcct
acctcctcaagactgatgttacttaagaatgattgtgtatattatatttt
cagatacttgtcatgtgataaaaataaagaggtggcagaaaattgagtct
gacttctaatactttcacttcttatgattcaggaccttatattcttagtt
cataaaataaaggagctaggatcaatggtatataagaattcttcctatat
agaatattaacagggagtaaaaggtactctcaacattaaatatttaggaa
taatagctatgagattatttatttgcacatgtcctacaattattttaaat
atgtttttttgatttataatcatgtctgttcccttgtcaaggaatcagtt
gcataactgcttaaattgtttccttgcaatttcttatgatagctttagca
aaaattttaatattgatatttcattttgtattttagcaaacctatacatg
agaaaatttaataactaccttgcagttttcaaactccaaaactaataatt
atatgaagctgtcccttacggagaggaaaacatttaaacacagtatgttg
ttttcgcaaacaaattcattataacatctatagaaccaatttatttctaa
gcatttaaactcaactgttaagcaagatcttaggcagatattatttcttt
aaagtaattttaattttctcagagatagtatttagaaaatttattccaca
tatactcagttaccactcaccagttagtagcatctgttgagatcaagatt
cagagcatttgcacgatataatgatctgtaaaattcatgttatctcaatc
atgaaaactttatgactgaagtcatgcctgattaacattgagttcttttt
cattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88459672_88460854
seq2: B6Ng01-209H11.g_62_1218 (reverse)

seq1  CAAAAAGAAAAAGAACCTCAAATGTTGTAATCAGCAAATGGACTATCAGT  50
      ||||| ||||||||| ||| |||||  |||||||  |   |||| |||||
seq2  CAAAATGAAAAAGAA-CTC-AATGT--TAATCAGGCA--TGACT-TCAGT  43

seq1  CATTAAAATTTTTTCATGAATGAGAT-ACATGATTTTTACAGATCATTTA  99
      |||   ||  ||||||||| |||||| |||||| |||||||||||| |||
seq2  CAT---AAAGTTTTCATGATTGAGATAACATGAATTTTACAGATCA-TTA  89

seq1  TAATTCTGTTGCAAAATTGCTCTGAAATCTTGGATCTCAACAGATGCTAC  149
      ||    |  ||||||  ||||||| |||||| ||||||||||||||||||
seq2  TA----TCGTGCAAA--TGCTCTG-AATCTT-GATCTCAACAGATGCTAC  131

seq1  TAACTGGTGAGTTGGTAACTTGAGTATATGT-GAATAAATTTTCCTTAAA  198
      ||||||||||| ||||||| ||||||||||| ||||||||||||  ||||
seq2  TAACTGGTGAG-TGGTAAC-TGAGTATATGTGGAATAAATTTTC--TAAA  177

seq1  TACTATCTTCTGAGAAAATTAAAATTTACTTTAAAGAAATAATATCTGCC  248
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  TACTATC-TCTGAGAAAATTAAAA-TTACTTTAAAGAAATAATATCTGCC  225

seq1  TAAAGATCTTGCTTAACAGTTGAGTTTTAAATGCTTAGAAATAAATTGGT  298
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  T-AAGATCTTGCTTAACAGTTGAG-TTTAAATGCTTAGAAATAAATTGGT  273

seq1  TCTATAGATGTTATAATGAATTTTGTTTGCAAAAACAACATACTGTGTTT  348
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TCTATAGATGTTATAATGAA-TTTGTTTGCGAAAACAACATACTGTGTTT  322

seq1  AAATGTTTTCCTCTCCGTAAGGGACAGCTTCATATAATTATTAGTTTTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTCCTCTCCGTAAGGGACAGCTTCATATAATTATTAGTTTTGG  372

seq1  AGTTTGAAAACTGCAAGGTAGTTATTAAATTTTCTCATGTATAGGTTTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAAAACTGCAAGGTAGTTATTAAATTTTCTCATGTATAGGTTTGC  422

seq1  TAAAATACAAAATGAAATATCAATATTAAAATTTTTGCTAAAGCTATCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACAAAATGAAATATCAATATTAAAATTTTTGCTAAAGCTATCAT  472

seq1  AAGAAATTGCAAGGAAACAATTTAAGCAGTTATGCAACTGATTCCTTGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTGCAAGGAAACAATTTAAGCAGTTATGCAACTGATTCCTTGAC  522

seq1  AAGGGAACAGACATGATTATAAATCAAAAAAACATATTTAAAATAATTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACAGACATGATTATAAATCAAAAAAACATATTTAAAATAATTGT  572

seq1  AGGACATGTGCAAATAAATAATCTCATAGCTATTATTCCTAAATATTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGTGCAAATAAATAATCTCATAGCTATTATTCCTAAATATTTAA  622

seq1  TGTTGAGAGTACCTTTTACTCCCTGTTAATATTCTATATAGGAAGAATTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGAGTACCTTTTACTCCCTGTTAATATTCTATATAGGAAGAATTC  672

seq1  TTATATACCATTGATCCTAGCTCCTTTATTTTATGAACTAAGAATATAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACCATTGATCCTAGCTCCTTTATTTTATGAACTAAGAATATAAG  722

seq1  GTCCTGAATCATAAGAAGTGAAAGTATTAGAAGTCAGACTCAATTTTCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAATCATAAGAAGTGAAAGTATTAGAAGTCAGACTCAATTTTCTG  772

seq1  CCACCTCTTTATTTTTATCACATGACAAGTATCTGAAAATATAATATACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTTTATTTTTATCACATGACAAGTATCTGAAAATATAATATACA  822

seq1  CAATCATTCTTAAGTAACATCAGTCTTGAGGAGGTAGGAGATATTGCTAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTCTTAAGTAACATCAGTCTTGAGGAGGTAGGAGATATTGCTAC  872

seq1  CTCAAACCTTGTAAGAAAGTGCATCTATGATTTTCCAGAGCTGGTTATAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCTTGTAAGAAAGTGCATCTATGATTTTCCAGAGCTGGTTATAG  922

seq1  ATCTAAGAACTGATTCAGTTCATAATTCATGAACAGACTTTAAATTAATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAACTGATTCAGTTCATAATTCATGAACAGACTTTAAATTAATT  972

seq1  TATAATCCCATTTTAAATGAAATGGAAAATTCAATTGGAATTGAAATTCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCCCATTTTAAATGAAATGGAAAATTCAATTGGAATTGAAATTCA  1022

seq1  GAAAAATTATATTTACTTGATGCATACAAACATGTATATAAAATTTAAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTATATTTACTTGATGCATACAAACATGTATATAAAATTTAAAG  1072

seq1  TTGGATAAGACAAAATTAGTGCTCAATTTATCTCTTCTTTTTTCTTGACT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATAAGACAAAATTAGTGCTCAATTTATCTCTTCTTTTTTCTTGACT  1122

seq1  TTGGACAGGACTTATAAAGAGATGATGATGAATTC  1183
      |||||||||||||||||||||||||||||||||||
seq2  TTGGACAGGACTTATAAAGAGATGATGATGAATTC  1157