BAC Information

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BAC

Clone NameB6Ng01-210J03
Chromosome2 (Build37)
Map Location 41,837,763 - 41,838,917
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J03.bB6Ng01-210J03.g
ACCGA028877GA028878
length1,1691,133
definitionB6Ng01-210J03.b B6Ng01-210J03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaactgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcacccc
tataggtggaacagcattatgagctaccagtaccccggagctcttgactc
tagctgcatatatatcaaagatgctagtcggccattcactgcaagagaag
cccattggacttgccaacttttaatgcccagttacaggtatttccaagga
caatgtgcattgtgactag

gaattcaaataaagcattggtgaggtccaacccttttgacagtatttcta
aagtgcagagaactctaaaaattttaaatgttgattttcataataagttg
agtgtaattagagcttcatgccattgaacctgctaggccctatgtgttgt
agctttaagtaattcttctaaatgatttttttttttacagactaaaattt
ttcttaatgcttttagctacatctactgataatctatgaactataccatt
tctgtaacatataatactattttataagaacctgatgatttctgaggttt
taattatgttacattatatggatgaaaataaattggaggctaaggtacag
ataataatgaaaaaagccaatacctcacccttgggatagtctccacttaa
gttttgtgtcaacatcttggaatataaggcttgatcaaacacagttaacc
tatttatgttctcctagaaaggaatcctggaaataatgtctccttccaca
ttgcattgctttagagttgtggactcacagattattttgagagaatgttt
gttattatgctaagatacagataattctaaaatgaattcttcagatagga
tctttgacttaagattttccttggtgctggtctagcagtgatgttggact
gtcatttgagcaggcacccacttctgcagcaccttttcacagcatttgac
agatggtggaatgagacaaaggttgctgaaaggcttttctcagagtccgc
cagttggtggatgctctagccaagcatctgacaccaggtctgttgctatt
tttactgaaccataagtctgagaatatgttgcaggtacatctgaaattgt
tcacaaatggtaccttgtattatgtcactctgttcaaagcataatttcct
cagtggctttctgtaagcatcctaaatataccccatatggttgctaatta
tggtgtatagcctcatttgtgtagagtaccactgtcatgattttaaggca
aatattacagaaatcatgttaccaggaaaaaaaaaccaactgtaaaacac
tatattaaagtgtatattctttctcgtcatattggattaatcactagctc
agtttagatgactatgtaattgtacgttgaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41837763_41838917
seq2: B6Ng01-210J03.g_63_1195 (reverse)

seq1  GTTTCAACTGTTACAATACAATTA---AGTCATCTTAAACTTTGAAGCTA  47
      ||||||||        ||||||||   ||||||| ||||||    |||||
seq2  GTTTCAAC-------GTACAATTACATAGTCATC-TAAACT---GAGCTA  39

seq1  GTGATTAATCCAAATTAATTGAAGGAGGAAAGATATACAACTTTTATTAT  97
      |||||||||||||  ||  || | ||| ||  |||||||   |||| |||
seq2  GTGATTAATCCAA--TA--TG-ACGAGAAAGAATATACA--CTTTAATAT  82

seq1  TAAGGTTGTTTTTACAGTTGGTTTTTTTTTCCTGGTAACATGATTTTCTG  147
        ||  || |||||||||||||||||||||||||||||||||| ||||||
seq2  --AG--TG-TTTTACAGTTGGTTTTTTTTTCCTGGTAACATGA-TTTCTG  126

seq1  TAATATTTGCCCTTAAAATCATGACAGTGGTACTCTACACAAATGAGGCT  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTG-CCTTAAAATCATGACAGTGGTACTCTACACAAATGAGGCT  175

seq1  ATACACCATAATTAGCAACCATATGGGGTATATTTAGGATGCTTACAGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCATAATTAGCAACCATATGGGGTATATTTAGGATGCTTACAGAA  225

seq1  AGCCACTGAGGAAATTATGCTTTGAACAGAGTGACATAATACAAGGTACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGAGGAAATTATGCTTTGAACAGAGTGACATAATACAAGGTACC  275

seq1  ATTTGTGAACAATTTCAGATGTACCTGCAACATATTCTCAGACTTATGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGAACAATTTCAGATGTACCTGCAACATATTCTCAGACTTATGGT  325

seq1  TCAGTAAAAATAGCAACAGACCTGGTGTCAGATGCTTGGCTAGAGCATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAAATAGCAACAGACCTGGTGTCAGATGCTTGGCTAGAGCATCC  375

seq1  ACCAACTGGCGGACTCTGAGAAAAGCCTTTCAGCAACCTTTGTCTCATTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTGGCGGACTCTGAGAAAAGCCTTTCAGCAACCTTTGTCTCATTC  425

seq1  CACCATCTGTCAAATGCTGTGAAAAGGTGCTGCAGAAGTGGGTGCCTGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTGTCAAATGCTGTGAAAAGGTGCTGCAGAAGTGGGTGCCTGCT  475

seq1  CAAATGACAGTCCAACATCACTGCTAGACCAGCACCAAGGAAAATCTTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACAGTCCAACATCACTGCTAGACCAGCACCAAGGAAAATCTTAA  525

seq1  GTCAAAGATCCTATCTGAAGAATTCATTTTAGAATTATCTGTATCTTAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGATCCTATCTGAAGAATTCATTTTAGAATTATCTGTATCTTAGC  575

seq1  ATAATAACAAACATTCTCTCAAAATAATCTGTGAGTCCACAACTCTAAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAACAAACATTCTCTCAAAATAATCTGTGAGTCCACAACTCTAAAG  625

seq1  CAATGCAATGTGGAAGGAGACATTATTTCCAGGATTCCTTTCTAGGAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAATGTGGAAGGAGACATTATTTCCAGGATTCCTTTCTAGGAGAA  675

seq1  CATAAATAGGTTAACTGTGTTTGATCAAGCCTTATATTCCAAGATGTTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAGGTTAACTGTGTTTGATCAAGCCTTATATTCCAAGATGTTGA  725

seq1  CACAAAACTTAAGTGGAGACTATCCCAAGGGTGAGGTATTGGCTTTTTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAACTTAAGTGGAGACTATCCCAAGGGTGAGGTATTGGCTTTTTTC  775

seq1  ATTATTATCTGTACCTTAGCCTCCAATTTATTTTCATCCATATAATGTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATCTGTACCTTAGCCTCCAATTTATTTTCATCCATATAATGTAA  825

seq1  CATAATTAAAACCTCAGAAATCATCAGGTTCTTATAAAATAGTATTATAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAAAACCTCAGAAATCATCAGGTTCTTATAAAATAGTATTATAT  875

seq1  GTTACAGAAATGGTATAGTTCATAGATTATCAGTAGATGTAGCTAAAAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAAATGGTATAGTTCATAGATTATCAGTAGATGTAGCTAAAAGC  925

seq1  ATTAAGAAAAATTTTAGTCTGTAAAAAAAAAAATCATTTAGAAGAATTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAAATTTTAGTCTGTAAAAAAAAAAATCATTTAGAAGAATTAC  975

seq1  TTAAAGCTACAACACATAGGGCCTAGCAGGTTCAATGGCATGAAGCTCTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCTACAACACATAGGGCCTAGCAGGTTCAATGGCATGAAGCTCTA  1025

seq1  ATTACACTCAACTTATTATGAAAATCAACATTTAAAATTTTTAGAGTTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTCAACTTATTATGAAAATCAACATTTAAAATTTTTAGAGTTCT  1075

seq1  CTGCACTTTAGAAATACTGTCAAAAGGGTTGGACCTCACCAATGCTTTAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTTTAGAAATACTGTCAAAAGGGTTGGACCTCACCAATGCTTTAT  1125

seq1  TTGAATTC  1155
      ||||||||
seq2  TTGAATTC  1133


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