BAC Information

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BAC

Clone NameB6Ng01-210P01
Chromosome2 (Build37)
Map Location 93,525,416 - 93,642,583
singlet/doubletdoublet
Overlap geneExt2
Upstream geneSyt13, LOC100042784, Trp53i11, C230071H18Rik, Tspan18, LOC100042789, LOC639658, Cd82, Alx4
Downstream gene2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210P01.bB6Ng01-210P01.g
ACCGA029145GA029146
length1,133528
definitionB6Ng01-210P01.b B6Ng01-210P01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,641,466 - 93,642,583)(93,525,416 - 93,525,949)
sequence
gaattcactttacagactagtctggccttgaacttgtgcaagtctcccaa
ctctgccttccaagtgctaggattacaggcatgtactaaaatccccaact
cttcacaaacagttctcatagagccttcagaggctaggaaagctgctgta
cttcagcaccctgttccaaggcaggatctggttacattctggatgggtgg
tctgtgtgggccactgggttcctgtagagcaagcaagtttttgtcatgta
cccaggatcttcaatttggcacgtcaatgtagcatgggataggctggcct
gcctggcacatacagtcttgtttgtatgttttgggcacagtgaacctctc
ttaccagttctgtgggtgatgggaaccatctccagtccaagttcccagac
accagtcaagaagccaacccaacagaactttcacccgatggcagcaggtc
tgccatgctagcccctctgcacaggatcccaccaccacagagagtaaatg
gccccaaacatcctcaggctgtggctgagaaacatgagaagcactgggcc
cagccctgagactgtgaggactagtctgctgcgtgtcctttccttagctc
actgtgatggccctgtgtcttcatctggctggtgtcccgttggctcagga
ctccatcatcactccagattcaacccaaggatgaaaacactgaagcccag
cagtgggcacgcactgaaatgccggagaccactttaagatgatcagtttt
ggagatttttcactgtcattgtatttcctagtaatttgatctttttgatt
tttatttatgactatatggaatttaagatcacttgaggtttgcaattagt
ttttaaaattctgtggttcagttaaccccgtgagagactctactgttctt
tcatggtagccccagaaagccaagggctcacctcccttggcttaccacag
agctgcgctttttattaaaggacactcctctttatccctccaaagactaa
aagtgaagacagtcttttggcttcatggtcctctccctggggaaggcagg
gaggggccctgtctgcagcatgctggagtctaccctctgggtagaggtgt
ttctacaggtattttctactatcttcctggggg
agttaataagaagcagtgtggctcatgtgtgtcatgtgggtaaggaacag
ggatggatgcacatggacaagtggttgatccttcctagagggtctcaggg
gtcccagcggtatggcagcctctagtttagcgccatgtcactttcttcta
ggtatgtctcattcctactctctccctggtccatatcatcaggactcaga
ctaacccagttctgtccagctgtccccgtgggagccctaatctgagaagc
tctaccacaggatagggctgcaactctcacttgtaaactgtaggtgatag
cctagtagactctgggatgtctacagtgtctcttctgggtgggaaggact
ctggcgtgcatggcaagaacagaatggagaggatttgtgtccagcatggg
tggcatccatgccatagcctgaggtctgggatagaaaaagagactgaaat
cgctccttgtcatttactgcctcacacaactgatgggactctagtgacca
attcttttcactaaatgaaatgagcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_93641466_93642583
seq2: B6Ng01-210P01.b_46_1178 (reverse)

seq1  CCCCCAGG-AGAT-GTGGGAAATCCCTG-AGAAACACCTCT-CACAGAGG  46
      |||||||| |||| || | |||| |||| |||||||||||| | ||||||
seq2  CCCCCAGGAAGATAGTAGAAAATACCTGTAGAAACACCTCTACCCAGAGG  50

seq1  GAGGACCCCAGCATGCTGCCGCCAGGGCCCCTCCCTGCCTTCCCCAGGGA  96
      |  ||| |||||||||||| | ||||||||||||||||||||||||||| 
seq2  GTAGACTCCAGCATGCTGCAGACAGGGCCCCTCCCTGCCTTCCCCAGGG-  99

seq1  AGAGGACCATGAAGCC-AAAGACTGTCTTCACTTTTAGTCTTTGGAGGGA  145
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGAGGACCATGAAGCCAAAAGACTGTCTTCACTTTTAGTCTTTGGAGGGA  149

seq1  TAAAGAGGAGTGTCCTTTA--TAAAAGCGCAGCTCTGTGGT-AGCC-AGG  191
      |||||||||||||||||||   ||||||||||||||||||| |||| |||
seq2  TAAAGAGGAGTGTCCTTTAATAAAAAGCGCAGCTCTGTGGTAAGCCAAGG  199

seq1  GAGGTGAGCCCTTGGCTTTCTGGGGCTACCATGAA--GACAGTAGAGTCT  239
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  GAGGTGAGCCCTTGGCTTTCTGGGGCTACCATGAAAGAACAGTAGAGTCT  249

seq1  CTCACGGG--TTACTGAACCACAGAATTTT-AAAACTAATTGC-AACCTC  285
      ||||||||  | |||||||||||||||||| |||||||||||| ||||||
seq2  CTCACGGGGTTAACTGAACCACAGAATTTTAAAAACTAATTGCAAACCTC  299

seq1  AAGTGATCTTAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCTTAAATTCCATATAGTCATAAATAAAAATCAAAAAGATCAAA  349

seq1  TTACTAGGAAATACAATGACAGTG-AAAATCTCCAAAACTGATCATCTTA  384
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTACTAGGAAATACAATGACAGTGAAAAATCTCCAAAACTGATCATCTTA  399

seq1  AAGTGGTCTCCGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTCTCCGGCATTTCAGTGCGTGCCCACTGCTGGGCTTCAGTGTTT  449

seq1  TCATCCTTGGGTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTGGGTTGAATCTGGAGTGATGATGGAGTCCTGAGCCAACGGGA  499

seq1  CACCAGCCAGATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGAC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCAGATGAAGACACAGGGCCATCACAGTGAGCTAAGGAAAGGAC  549

seq1  ACGCAGCAGACTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGCAGACTAGTCCTCACAGTCTCAGGGCTGGGCCCAGTGCTTCTCA  599

seq1  TGTTTCTCAGCCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCAGCCACAGCCTGAGGATGTTTGGGGCCATTTACTCTCTGTGG  649

seq1  TGGTGGGATCCTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGATCCTGTGCAGAGGGGCTAGCATGGCAGACCTGCTGCCATCGG  699

seq1  GTGAAAGTTCTGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGAC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGTTCTGTTGGGTTGGCTTCTTGACTGGTGTCTGGGAACTTGGAC  749

seq1  TGGAGATGGTTCCCATCACCCACAGAACTGGTAAGAGAGGTTCACTGTGC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGGTTCCCATCACCCACAGAACTGGTAAGAGAGGTTCACTGTGC  799

seq1  CCAAAACATACAAACAAGACTGTATGTGCCAGGCAGGCCAGCCTATCCCA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACATACAAACAAGACTGTATGTGCCAGGCAGGCCAGCCTATCCCA  849

seq1  TGCTACATTGACGTGCCAAATTGAAGATCCTGGGTACATGACAAAAACTT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATTGACGTGCCAAATTGAAGATCCTGGGTACATGACAAAAACTT  899

seq1  GCTTGCTCTACAGGAACCCAGTGGCCCACACAGACCACCCATCCAGAATG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCTACAGGAACCCAGTGGCCCACACAGACCACCCATCCAGAATG  949

seq1  TAACCAGATCCTGCCTTGGAACAGGGTGCTGAAGTACAGCAGCTTTCCTA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATCCTGCCTTGGAACAGGGTGCTGAAGTACAGCAGCTTTCCTA  999

seq1  GCCTCTGAAGGCTCTATGAGAACTGTTTGTGAAGAGTTGGGGATTTTAGT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAAGGCTCTATGAGAACTGTTTGTGAAGAGTTGGGGATTTTAGT  1049

seq1  ACATGCCTGTAATCCTAGCACTTGGAAGGCAGAGTTGGGAGACTTGCACA  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGTAATCCTAGCACTTGGAAGGCAGAGTTGGGAGACTTGCACA  1099

seq1  AGTTCAAGGCCAGACTAGTCTGTAAAGTGAATTC  1118
      ||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGCCAGACTAGTCTGTAAAGTGAATTC  1133

seq1: chr2_93525416_93525949
seq2: B6Ng01-210P01.g_66_599

seq1  GAATTCAGTTAATAAGAAGCAGTGTGGCTCATGTGTGTCATGTGGGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAATAAGAAGCAGTGTGGCTCATGTGTGTCATGTGGGTAAG  50

seq1  GAACAGGGATGGATGCACATGGACAAGTGGTTGATCCTTCCTAGAGGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGATGGATGCACATGGACAAGTGGTTGATCCTTCCTAGAGGGTC  100

seq1  TCAGGGGTCCCAGCGGTATGGCAGCCTCTAGTTTAGCGCCATGTCACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTCCCAGCGGTATGGCAGCCTCTAGTTTAGCGCCATGTCACTTT  150

seq1  CTTCTAGGTATGTCTCATTCCTACTCTCTCCCTGGTCCATATCATCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGTATGTCTCATTCCTACTCTCTCCCTGGTCCATATCATCAGGA  200

seq1  CTCAGACTAACCCAGTTCTGTCCAGCTGTCCCCGTGGGAGCCCTAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTAACCCAGTTCTGTCCAGCTGTCCCCGTGGGAGCCCTAATCTG  250

seq1  AGAAGCTCTACCACAGGATAGGGCTGCAACTCTCACTTGTAAACTGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTCTACCACAGGATAGGGCTGCAACTCTCACTTGTAAACTGTAGG  300

seq1  TGATAGCCTAGTAGACTCTGGGATGTCTACAGTGTCTCTTCTGGGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGCCTAGTAGACTCTGGGATGTCTACAGTGTCTCTTCTGGGTGGGA  350

seq1  AGGACTCTGGCGTGCATGGCAAGAACAGAATGGAGAGGATTTGTGTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTGGCGTGCATGGCAAGAACAGAATGGAGAGGATTTGTGTCCAG  400

seq1  CATGGGTGGCATCCATGCCATAGCCTGAGGTCTGGGATAGAAAAAGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGGCATCCATGCCATAGCCTGAGGTCTGGGATAGAAAAAGAGAC  450

seq1  TGAAATCGCTCCTTGTCATTTACTGCCTCACACAACTGATGGGACTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCGCTCCTTGTCATTTACTGCCTCACACAACTGATGGGACTCTAG  500

seq1  TGACCAATTCTTTTCACTAAATGAAATGAGCCTG  534
      ||||||||||||||||||||||||||||||||||
seq2  TGACCAATTCTTTTCACTAAATGAAATGAGCCTG  534