BAC Information

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BAC

Clone NameB6Ng01-212G15
Chromosome2 (Build37)
Map Location 8,507,779 - 8,668,418
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212G15.bB6Ng01-212G15.g
ACCGA030216GA030217
length1,1581,136
definitionB6Ng01-212G15.b B6Ng01-212G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,507,779 - 8,508,934)(8,667,269 - 8,668,418)
sequence
gaattcttgtgttgatattgactggaagaatatacctcatttccgtgact
acattggttaaaaatcgattatatatcctcatttcctttctatttttcag
atgttgcatcagatagactaggtgtgctttcaacaaatttgagagtaaat
catgctttaaactgctggcaacatagaataagtcaaattcatattgagac
tgatgtccagcagattcagttgggtatggactttaataaaaagtttgaaa
aagatgccatctccaagaaatatgaagcacagatgaaagtatccaagata
caggatgactttaaacatgaagtcaaatcaattgcgaaaactgcacatca
atccaagacccactcagctcccatcaactcattaaaagctccgtggcact
tccaaatcaggagttacatttctctcttttgaagctctgcaatgctttac
accacttttgtcataaatcataatttctcttataaaagtgtctcatccca
tgattaaacaatgatttatctgaaggtgaaaagtatgtcatttttatttt
ttgtgttttattttctgacaatgtctacagtggcaggcagagtcagttaa
atgttgagtaactgatatttcaagacttgcgtgtgcctccatcataactt
ttttgttgtcagatgtaagacaccatgaagaagtactcaagattaaaaat
aaaaaagattttatgtattatacgatagtctctgctctgaatgactattc
taactgtacagaagttgattgcattgtatagactttgggtctggttaatt
ttgatgggtgatgttattcacctctgtgattatttttcaactacattcag
ttatgcagtgagcacagacaaaagcatagactattatcaactgtgcagat
gctttgttatctggtccttcttcttgcttactagagtagactatagactt
agatatttcaaaacataccttaataagggttttaaatgttttaatctccc
tccatttcaccacccaacagaaggtagtgaaaggaaagggaaattgttct
tggtcttttataggacaaagggtgatgaggacatgtttaagaagtagttc
ttttgaatggttcaaatctattgtcatggaattagcagtcggtcacatgg
atcagcag

gaattcagagaacatgcagtaagacactgtttgtaaatgaaaaacgaaga
cacagttctacaactctacacgttgtttacacactacaactcaatcattc
tgaagctgtgtgacaatgtatctgcctgacgtcacttattttatcattta
aagggaactcaatacatactccacagagcatagctgtgtgcactcaaaca
aaatggcctttttacaaattttgatacagatttaccttattttaggtact
ggtggacccaactttttcaggattttagattaagacaattattaagtaac
tcttctgcctctaaaacaaaatttagaaatacagcttcagtgtgttgcta
aaaacttaattattgaactcaaaagggaaattaaaatatttttgttttat
agttttaagaagctttatattaccagaaaagatataaaagtacataattt
atattggtaatataacctggaatatatataataaaaattatacttatatt
tacaatggtgtcaattagtaaactgctcatagaaaagtcattttccataa
ggaagtttgtttgttcaaaacagaaagtgaaaatttagtaaaatagcttt
tttacttgaaatatcatttgtgacatacatgtatgtgtataaaatatata
ttcctaaatacaaccttctcagtctgtatgttacttgtgtatgtttcagg
gctgaccatttgatattcgacagatcaatgtgctcatccctggaaagcga
attcttccacttatatctatataagaacaatgaatgataaacaagcccat
gaatttgcaagaatagaaagaggtgtaaatgggcggggcaagagagaaga
aaagggaggggaaatagtgtaactttattatgatctccaaaataaaagaa
atgttgaaaatgtacattgttttcctacagatctgcgtttgctttgattg
ctaattttacacctatgtaaccatggagacacagctaacttccttagtct
ctggtttcattatttaaaactttgatacgatactcttttaatgtttgatt
tctcagtgttgctgtgatctggaatacataggtttcaggagtctcacata
gccttgaactcctgattcctcagactctaacctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8507779_8508934
seq2: B6Ng01-212G15.b_43_1200

seq1  GAATTCTTGTGTTGATATTGACTGGAAGAATATACCTCATTTCCGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGTTGATATTGACTGGAAGAATATACCTCATTTCCGTGACT  50

seq1  ACATTGGTTAAAAATCGATTATATATCCTCATTTCCTTTCTATTTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGTTAAAAATCGATTATATATCCTCATTTCCTTTCTATTTTTCAG  100

seq1  ATGTTGCATCAGATAGACTAGGTGTGCTTTCAACAAATTTGAGAGTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCATCAGATAGACTAGGTGTGCTTTCAACAAATTTGAGAGTAAAT  150

seq1  CATGCTTTAAACTGCTGGCAACATAGAATAAGTCAAATTCATATTGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTAAACTGCTGGCAACATAGAATAAGTCAAATTCATATTGAGAC  200

seq1  TGATGTCCAGCAGATTCAGTTGGGTATGGACTTTAATAAAAAGTTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCCAGCAGATTCAGTTGGGTATGGACTTTAATAAAAAGTTTGAAA  250

seq1  AAGATGCCATCTCCAAGAAATATGAAGCACAGATGAAAGTATCCAAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCATCTCCAAGAAATATGAAGCACAGATGAAAGTATCCAAGATA  300

seq1  CAGGATGACTTTAAACATGAAGTCAAATCAATTGCGAAAACTGCACATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGACTTTAAACATGAAGTCAAATCAATTGCGAAAACTGCACATCA  350

seq1  ATCCAAGACCCACTCAGCTCCCATCAACTCATTAAAAGCTCCGTGGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGACCCACTCAGCTCCCATCAACTCATTAAAAGCTCCGTGGCACT  400

seq1  TCCAAATCAGGAGTTACATTTCTCTCTTTTGAAGCTCTGCAATGCTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCAGGAGTTACATTTCTCTCTTTTGAAGCTCTGCAATGCTTTAC  450

seq1  ACCACTTTTGTCATAAATCATAATTTCTCTTATAAAAGTGTCTCATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTTTGTCATAAATCATAATTTCTCTTATAAAAGTGTCTCATCCCA  500

seq1  TGATTAAACAATGATTTATCTGAAGGTGAAAAGTATGTCATTTTTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAACAATGATTTATCTGAAGGTGAAAAGTATGTCATTTTTATTTT  550

seq1  TTGTGTTTTATTTTCTGACAATGTCTACAGTGGCAGGCAGAGTCAGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTATTTTCTGACAATGTCTACAGTGGCAGGCAGAGTCAGTTAA  600

seq1  ATGTTGAGTAACTGATATTTCAAGACTTGCGTGTGCCTCCATCATAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGTAACTGATATTTCAAGACTTGCGTGTGCCTCCATCATAACTT  650

seq1  TTTTGTTGTCAGATGTAAGACACCATGAAGAAGTACTCAAGATTAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGTCAGATGTAAGACACCATGAAGAAGTACTCAAGATTAAAAAT  700

seq1  AAAAAAGATTTTATGTATTATACGATAGTCTCTGCTCTGAATGACTATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATTTTATGTATTATACGATAGTCTCTGCTCTGAATGACTATTC  750

seq1  TAACTGTACAGAAGTTGATTGCATTGTATAGACTTTGGGTCTGGTTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTACAGAAGTTGATTGCATTGTATAGACTTTGGGTCTGGTTAATT  800

seq1  TTGATGGGTGATGTTATTCACCTCTGTGATTATTTTTCAACTACATTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGTGATGTTATTCACCTCTGTGATTATTTTTCAACTACATTCAG  850

seq1  TTATGCAGTGAGCACAGACAAAAGCATAGACTATTATCAACTGTGCAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGTGAGCACAGACAAAAGCATAGACTATTATCAACTGTGCAGAT  900

seq1  GCTTTGTTATCTGGTCCTTCTTCTTGCTTACTAGAGTAGACTATAGACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTATCTGGTCCTTCTTCTTGCTTACTAGAGTAGACTATAGACTT  950

seq1  AGATATTTCAAAACATACCTTAATAAGGGTTTTAAATGTTTTAATCTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTCAAAACATACCTTAATAAGGGTTTTAAATGTTTTAATCTCCC  1000

seq1  TCCATTTCACCACCCAACAG-AGGTAGTGGAAAGGAAAGG--AAATGTTC  1047
      |||||||||||||||||||| ||||||| |||||||||||  || |||||
seq2  TCCATTTCACCACCCAACAGAAGGTAGT-GAAAGGAAAGGGAAATTGTTC  1049

seq1  TT-GTC-TTTATAGGACAAAGGGTGATGAGGACATGTTT-AGAAGTAGTT  1094
      || ||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  TTGGTCTTTTATAGGACAAAGGGTGATGAGGACATGTTTAAGAAGTAGTT  1099

seq1  CTTTTGAATGGTTCAAATCTTTATTGTCATGATATTAGCAGTCAGTTCAC  1144
      |||||||||||||||||||  ||||||||||  |||||||||| | ||||
seq2  CTTTTGAATGGTTCAAATC--TATTGTCATGGAATTAGCAGTC-GGTCAC  1146

seq1  ATGGATCAGCAG  1156
      ||||||||||||
seq2  ATGGATCAGCAG  1158


seq1: chr2_8667269_8668418
seq2: B6Ng01-212G15.g_65_1200 (reverse)

seq1  GAGAGG-TAGAGGTCTGAGG-ATCAGGAGGTCAAGGGCTATGTGAGACTC  48
      |||||| |||| |||||||| |||||||| |||| |||||||||||||||
seq2  GAGAGGTTAGA-GTCTGAGGAATCAGGAGTTCAA-GGCTATGTGAGACTC  48

seq1  CTTGAAAACCTATGAAAACACAGAAATACACAAGCACACTGGAGAAAATC  98
      ||   ||||||||| |  | ||||    ||||   ||||| ||| |||||
seq2  CT--GAAACCTATGTATTC-CAGA---TCACAGCAACACT-GAG-AAATC  90

seq1  AAACATTTAAAAGAGTAATCGTATTCAAAGTTTTAAAATAATGAAACCAG  148
      ||||| |||||||||| |||||| |||||||||| |||||||||||||||
seq2  AAACA-TTAAAAGAGT-ATCGTA-TCAAAGTTTT-AAATAATGAAACCAG  136

seq1  AGACTAAGGAAGTTAGCTGTTGTCTCCATGGTTACATAGGTGTAAAATTA  198
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGACTAAGGAAGTTAGCTG-TGTCTCCATGGTTACATAGGTGTAAAATTA  185

seq1  GCAATCAAAGCAAACGCAGATCTGTAGGAAAACAATGTACATTTTCAACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAAAGCAAACGCAGATCTGTAGGAAAACAATGTACATTTTCAACA  235

seq1  TTTCTTTTATTTTTGGAGATCATAATAAAGTTACACTATTTCCCCTCCCT  298
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTA-TTTTGGAGATCATAATAAAGTTACACTATTTCCCCTCCCT  284

seq1  TTTCTTCTCTCTTGCCCCGCCCATTTACACCTCTTTCTATTCTTGCAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCTCTTGCCCCGCCCATTTACACCTCTTTCTATTCTTGCAAAT  334

seq1  TCATGGGCTTGTTTATCATTCATTGTTCTTATATAGATATAAGTGGAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGCTTGTTTATCATTCATTGTTCTTATATAGATATAAGTGGAAGA  384

seq1  ATTCGCTTTCCAGGGATGAGCACATTGATCTGTCGAATATCAAATGGTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCTTTCCAGGGATGAGCACATTGATCTGTCGAATATCAAATGGTCA  434

seq1  GCCCTGAAACATACACAAGTAACATACAGACTGAGAAGGTTGTATTTAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGAAACATACACAAGTAACATACAGACTGAGAAGGTTGTATTTAGG  484

seq1  AATATATATTTTATACACATACATGTATGTCACAAATGATATTTCAAGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATTTTATACACATACATGTATGTCACAAATGATATTTCAAGTA  534

seq1  AAAAAGCTATTTTACTAAATTTTCACTTTCTGTTTTGAACAAACAAACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTATTTTACTAAATTTTCACTTTCTGTTTTGAACAAACAAACTT  584

seq1  CCTTATGGAAAATGACTTTTCTATGAGCAGTTTACTAATTGACACCATTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGGAAAATGACTTTTCTATGAGCAGTTTACTAATTGACACCATTG  634

seq1  TAAATATAAGTATAATTTTTATTATATATATTCCAGGTTATATTACCAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATAAGTATAATTTTTATTATATATATTCCAGGTTATATTACCAAT  684

seq1  ATAAATTATGTACTTTTATATCTTTTCTGGTAATATAAAGCTTCTTAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATGTACTTTTATATCTTTTCTGGTAATATAAAGCTTCTTAAAA  734

seq1  CTATAAAACAAAAATATTTTAATTTCCCTTTTGAGTTCAATAATTAAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAACAAAAATATTTTAATTTCCCTTTTGAGTTCAATAATTAAGTT  784

seq1  TTTAGCAACACACTGAAGCTGTATTTCTAAATTTTGTTTTAGAGGCAGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAACACACTGAAGCTGTATTTCTAAATTTTGTTTTAGAGGCAGAA  834

seq1  GAGTTACTTAATAATTGTCTTAATCTAAAATCCTGAAAAAGTTGGGTCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACTTAATAATTGTCTTAATCTAAAATCCTGAAAAAGTTGGGTCCA  884

seq1  CCAGTACCTAAAATAAGGTAAATCTGTATCAAAATTTGTAAAAAGGCCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCTAAAATAAGGTAAATCTGTATCAAAATTTGTAAAAAGGCCAT  934

seq1  TTTGTTTGAGTGCACACAGCTATGCTCTGTGGAGTATGTATTGAGTTCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGAGTGCACACAGCTATGCTCTGTGGAGTATGTATTGAGTTCCC  984

seq1  TTTAAATGATAAAATAAGTGACGTCAGGCAGATACATTGTCACACAGCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGATAAAATAAGTGACGTCAGGCAGATACATTGTCACACAGCTT  1034

seq1  CAGAATGATTGAGTTGTAGTGTGTAAACAACGTGTAGAGTTGTAGAACTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGATTGAGTTGTAGTGTGTAAACAACGTGTAGAGTTGTAGAACTG  1084

seq1  TGTCTTCGTTTTTCATTTACAAACAGTGTCTTACTGCATGTTCTCTGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCGTTTTTCATTTACAAACAGTGTCTTACTGCATGTTCTCTGAAT  1134

seq1  TC  1150
      ||
seq2  TC  1136


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