BAC Information

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BAC

Clone NameB6Ng01-212O22
Chromosome2 (Build37)
Map Location 86,954,922 - 86,956,024
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259
Downstream geneLOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212O22.bB6Ng01-212O22.g
ACCGA030602GA030603
length1,1801,092
definitionB6Ng01-212O22.b B6Ng01-212O22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattaaaagccctcccaaaaagcccaagatcagttggttttagtg
cagaacttcaaagaagacctaataccaatagttgtcaaactatttcacaa
aatagaaacagaaggaatactacctaattcactctataaaaccacagtca
ttctgatacctaagacatacaacaacccaacaaagaaagagaacttcaga
caaatttcacttaggaatatcgttgcaaaaatactcaataaaattcttgc
aaacagaatgcaattacacatcaaatgagtactcactaccatcaaatatc
ttcaacccaggaatgcaggaatggttcaacatacaaaaatctttcagcat
aatccactatataaacaaactcagaaaacaagtcacatggtaatctcatt
agatgctgaaaaagccttcaagaaaatacaacacactttcatgttaaaaa
tcttggaaagatcagaaagtcaaagcacataactaaacatattaagaaca
atatacagcaaaccaacacctaacatcaaattaaatggagagaaatgtga
tacaatcccactaaaatcaaacaagacaaggttgcccactctattcctat
taattcaatatagtagccgaagttctaactagagcaattagacaacaaaa
gtaggtcaaagggatataaattggaaaggaagtagtcaacttatcagtgt
ttgcaggtgatatgatagtatacataagcaacatcaaaaatttgatgaaa
gaactactgaggaatctggaatggccgagaagcacctaaagaaatgttta
acttccttagtcatcagggaaatgcaagtcaaatcaatcatgatattcca
catcacaccaataagaatggctaagtaaaaaactcagcaacagtagatgt
tgggaaggatgtggataagaagaacactccctccattgattatggggttg
aagctggtacaaagaatttgcaaatcaatcatgcaaaatattcagaaaat
ttgaaatagctctacctgtaaaaccagcttatatcactcctgagcatata
gtcaaatattgttccaatatataacagacacatgttcagtatattccagc
agctatttctaatagcagagcctgacattcccttaattgaagattgcatc
cgaaattgtgttattttatacaccaaaaat
gaattcttgagaaatgttgaaattgtatgcctcccattagctgggatcct
cttgacttttgcaattactcttgtttgtttgtttgtttgtttgtttttca
aggcagggtttctctgtgtagtcctggctgtcctggaactcactctgtag
accagtctggcctcgaacttagaaatttgcctgcctctgcctcccaagtt
ctggaattaaagacttgtgccaccatgcccggccttgtaattactattaa
tgtgcctgtccttgtgctaagccacagtaagcatgtggtgactggttaga
caataaagaacttacttgggaagtaggagatatggtgatgttaaaaaaaa
tctagaaaaggtaggaaattttacataataatatctgagggtaatagaca
ttctaaaaactaaaatatttgtatttttacacattctttcaagaagtgaa
gactgaaatatgctattgaaaactgtgttacctatttttcattttgatga
aattctccaatatgtgtgattctaatttttaaaatgaattggaatctatg
agctattccaaattcttcttgcaatttaaaccattaccatgttttaaagt
gttatttattaattatacaagtgaaggagaaccacaatggaaaattacat
gttatatggtaatgagggaaataaaatctataatatatttatgatcatcc
acattgttagtttatgaaaattaaacaacaatgtaattgcaaactacata
atattttatgattttatatagtataatgtgtcccaaaagagtaaccattg
aagattttacatggtgtcaaaataagaatgaatatactataggaaaaata
tatatagctacatcaattttgggagaaattttaattaatttcaattgttt
tattaccacaacattataacaatcttccaagtgacttcaaggattacaca
tcttgttctcaattctgctgttttatttccagtctttatgagcattaagc
agatgcttgatttataggaaattcagatctttaaagaatgttgtgaagaa
tgattttaccttttcattctggcagaaagaatattccactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86954922_86956024
seq2: B6Ng01-212O22.g_68_1159 (reverse)

seq1  TAAGTGGATATTTCTTTCTGCAAGAATGAAAAAGTAAAATCTATCTTTCA  50
      ||||||||   |||||||||| |||||||||| |||||||| ||  ||||
seq2  TAAGTGGAATATTCTTTCTGCCAGAATGAAAAGGTAAAATC-ATTCTTCA  49

seq1  CAAACATCTTTAAAGAATCTGGAATTTTCTATAAATTCAAGCATCTTGCT  100
      |||   ||||||||| |||| |||||| ||||||| ||||||||| ||| 
seq2  CAACATTCTTTAAAG-ATCT-GAATTTCCTATAAA-TCAAGCATC-TGC-  94

seq1  TTAATGCTCAATAAAGACTTGGAATAAAACAGCAGAATTTGAGAACAAAG  150
      ||||||||| ||||||||| | ||||||||||||||| |||||||| |||
seq2  TTAATGCTC-ATAAAGACTGGAAATAAAACAGCAGAA-TTGAGAAC-AAG  141

seq1  ATGTTGTAATCCTTTGGAAGTCACTTGGAAGATTGTTATAATGTTGTGGT  200
      ||| ||||||||||  ||||||||||||||||||||||||||||||||||
seq2  ATG-TGTAATCCTT--GAAGTCACTTGGAAGATTGTTATAATGTTGTGGT  188

seq1  AATAAAACAATTGAAATTAATTAAAATTTCT-CCAAAATTGATGTAGCTA  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATAAAACAATTGAAATTAATTAAAATTTCTCCCAAAATTGATGTAGCTA  238

seq1  TATATATTTTTCCTATAGTATATTCATTCTTATTTTGACACCATGTAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTTTTCCTATAGTATATTCATTCTTATTTTGACACCATGTAAAA  288

seq1  TCTTCAATGGTTACTCTTTTGGGACACATTATACTATATAAAATCATAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATGGTTACTCTTTTGGGACACATTATACTATATAAAATCATAAA  338

seq1  ATATTATGTAGTTTGCAATTACATTGTTGTTTAATTTTCATAAACTAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGTAGTTTGCAATTACATTGTTGTTTAATTTTCATAAACTAACA  388

seq1  ATGTGGATGATCATAAATATATTATAGATTTTATTTCCCTCATTACCATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATGATCATAAATATATTATAGATTTTATTTCCCTCATTACCATA  438

seq1  TAACATGTAATTTTCCATTGTGGTTCTCCTTCACTTGTATAATTAATAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGTAATTTTCCATTGTGGTTCTCCTTCACTTGTATAATTAATAAA  488

seq1  TAACACTTTAAAACATGGTAATGGTTTAAATTGCAAGAAGAATTTGGAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTTTAAAACATGGTAATGGTTTAAATTGCAAGAAGAATTTGGAAT  538

seq1  AGCTCATAGATTCCAATTCATTTTAAAAATTAGAATCACACATATTGGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATAGATTCCAATTCATTTTAAAAATTAGAATCACACATATTGGAG  588

seq1  AATTTCATCAAAATGAAAAATAGGTAACACAGTTTTCAATAGCATATTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATCAAAATGAAAAATAGGTAACACAGTTTTCAATAGCATATTTC  638

seq1  AGTCTTCACTTCTTGAAAGAATGTGTAAAAATACAAATATTTTAGTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCACTTCTTGAAAGAATGTGTAAAAATACAAATATTTTAGTTTTT  688

seq1  AGAATGTCTATTACCCTCAGATATTATTATGTAAAATTTCCTACCTTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTATTACCCTCAGATATTATTATGTAAAATTTCCTACCTTTTC  738

seq1  TAGATTTTTTTTAACATCACCATATCTCCTACTTCCCAAGTAAGTTCTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTTTTAACATCACCATATCTCCTACTTCCCAAGTAAGTTCTTT  788

seq1  ATTGTCTAACCAGTCACCACATGCTTACTGTGGCTTAGCACAAGGACAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTAACCAGTCACCACATGCTTACTGTGGCTTAGCACAAGGACAGG  838

seq1  CACATTAATAGTAATTACAAGGCCGGGCATGGTGGCACAAGTCTTTAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAATAGTAATTACAAGGCCGGGCATGGTGGCACAAGTCTTTAATT  888

seq1  CCAGAACTTGGGAGGCAGAGGCAGGCAAATTTCTAAGTTCGAGGCCAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTTGGGAGGCAGAGGCAGGCAAATTTCTAAGTTCGAGGCCAGAC  938

seq1  TGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCT  988

seq1  GCCTTGAAAAACAAACAAACAAACAAACAAACAAGAGTAATTGCAAAAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAAAAACAAACAAACAAACAAACAAACAAGAGTAATTGCAAAAGT  1038

seq1  CAAGAGGATCCCAGCTAATGGGAGGCATACAATTTCAACATTTCTCAAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGATCCCAGCTAATGGGAGGCATACAATTTCAACATTTCTCAAGA  1088

seq1  ATTC  1103
      ||||
seq2  ATTC  1092