BAC Information

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BAC

Clone NameB6Ng01-213H24
Chromosome2 (Build37)
Map Location 85,229,536 - 85,230,701
singlet/doubletsinglet
Overlap genenone
Upstream geneTfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1
Downstream geneOlfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213H24.bB6Ng01-213H24.g
ACCGA031009GA031010
length1,0841,167
definitionB6Ng01-213H24.b B6Ng01-213H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataatgtcttattttctgcattttaaccagttgggaaactttg
cattaatcaccatgtacgtcaaaaagaagcatctctaagctgtagaagtc
atgttgtagatgtaactgtgacttggttctgtagctctgcattttgatta
gttgtgcatcactgcagaagaggtggtcaaaagattgttagagccagagg
cacaggaaatttggtgtgaaattgtgtctcctagaaacatcagaaactac
acacaggaattctcaccaacatggctgcctaagcatgaactgaccaagaa
tgacgtcagtaaacatgctaacagggacgctagggactctcagaagacca
cactcttagacaaagaactataggcaatacagtttccccaagaaactagg
tatccaatgctcagtactgaaaacattatatatacataatatatacatat
atgttatatatacatatatatgtatatgtatatatgtgtgttggtaatta
caattaaggaaaaagaatccataagttataaattagaataagagcaagaa
ggtagtacatgagagggcttgaagggatgaaaggaaagggtgaagtgtaa
ttatattaacataaaatatttataacttatagttgggacatgtctcagta
gtaaggtgcttatttaaacatgtgaggccataggttcaatcctcagcagc
tcaggaaagaaaatatcacatatacatattcctaaatgtaacctgctcag
tccatgtaatattactggtttgtatattttcagggttgactatttgtcat
tggacaaccatttggtgtgctcttccccaaggaaaagccatctttctgga
ctctcagctttcctagctttactatagttcttggtaagactgagaccttg
taaacctttcctgtccattttgggaatgtccactggtgtcattctttatt
ccaacttcacatttggacagtcatgctgatgaggactgtaatgggcaatt
atattctgacacactctctcaacacaaactccttgaattctttgggttct
taatgatcttctgggccctctttcaaatgattcc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgacatataattttaaattcaaatttatt
ttattttattgatttatacatgctatttgctcaaaatattgccatacatc
acaaacaagcaatttactgaaacatcaaatatcaaaaatctaaatattaa
attaatcaaactattatgctgtaaaaggaaaaataaaatactactagata
cctgttttcctggacaaaaggtatgataaataccaactccataaggaaat
aagaataggtgaattatcacacactccggtaggaaggaacacagaggtat
atgtgttaccagaaatgggtactgtagatgttcagtcacattaaatatgt
gagatgcaagtttcaaactggtaattttgttcataggaacatatcactga
gacattttcacagtggattatttgccacagacaagatgtgaccaatcttc
tcatcactagcagagaacgcaggttaatgctgagaggtgaacagaattag
gaaaagctactgaagtgtggtgtgtggagcatcaggctgtggattctgct
aaagcgactcataatggcataagaacaggaagtgaccttgtttacataaa
actgttaaagaattttgacaaagctaacatcttctcttggttttcatgag
tttttagaaatcatagaaagaaacaagcagtttctcatagatacctcagt
aaactcactgacagaagactgtacatggcagctaaagcacagttgacaag
tagaagagagataaaatgggtatgtgcaaataagttgttcaaggttatgt
agtactataagttgatatttccatatacagtaactggcatgagtgaacag
aattttaatttcaatatatagcatagaggaacaaccagtaaatgaaatag
catactttcatttcgaattcgaagttaaacaaaacagagagactgattct
ggaacttgactggaggattagctgagttagtaaagttagcgcgaatccca
tcacctccagtgcccattttgaaaggaaaatcaagcatgggaggcctagg
ccaggaagaatgctggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85229536_85230701
seq2: B6Ng01-213H24.g_69_1235 (reverse)

seq1  GCCAGCAATCTTCCT-GCCTCTGCCTCCCCATGC-TGTGTTTTCTTTC-A  47
      ||||||| ||||||| ||||  |||| ||||||| ||  ||| ||||| |
seq2  GCCAGCATTCTTCCTGGCCTAGGCCT-CCCATGCTTGATTTTCCTTTCAA  49

seq1  AATGTGCACTGGAGTGGATGGGGATCTGCGCTTACTTTACTGACTCAGCT  97
      |||| |||||||||  ||| |||||  ||||| |||||||| ||||||||
seq2  AATGGGCACTGGAGGTGAT-GGGATTCGCGCTAACTTTACTAACTCAGCT  98

seq1  ATTCCTCAGTTCAAG-TCCAAGATCAGTCTCTCTGTTTTGTTTAACTTCG  146
      | |||||   ||||| ||||  ||||||||||||||||||||||||||||
seq2  AATCCTCCAGTCAAGTTCCAGAATCAGTCTCTCTGTTTTGTTTAACTTCG  148

seq1  AATTCGAAATGAAAGTATGCTTATTTCATTTACTGGTTGTTCCTCTATGC  196
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTCGAAATGAAAGTATGC-TATTTCATTTACTGGTTGTTCCTCTATGC  197

seq1  TATATATTTGAATTAAAATTCTGTTCACTCATGCCAGTTACTGTATATGG  246
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTGAAATTAAAATTCTGTTCACTCATGCCAGTTACTGTATATGG  247

seq1  AAATATCAACTTATAGTACTACATAACCTTGAACAACTTATTTGCACATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAACTTATAGTACTACATAACCTTGAACAACTTATTTGCACATA  297

seq1  CCCATTTTATCTCTCTTCTACTTGTCAACTGTGCTTTAGCTGCCATGTAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTATCTCTCTTCTACTTGTCAACTGTGCTTTAGCTGCCATGTAC  347

seq1  AGTCTTCTGTCAGTGAGTTTACTGAGGTATCTATGAGAAACTGCTTGTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTGTCAGTGAGTTTACTGAGGTATCTATGAGAAACTGCTTGTTT  397

seq1  CTTTCTATGATTTCTAAAAACTCATGAAAACCAAGAGAAGATGTTAGCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATGATTTCTAAAAACTCATGAAAACCAAGAGAAGATGTTAGCTT  447

seq1  TGTCAAAATTCTTTAACAGTTTTATGTAAACAAGGTCACTTCCTGTTCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATTCTTTAACAGTTTTATGTAAACAAGGTCACTTCCTGTTCTT  497

seq1  ATGCCATTATGAGTCGCTTTAGCAGAATCCACAGCCTGATGCTCCACACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATTATGAGTCGCTTTAGCAGAATCCACAGCCTGATGCTCCACACA  547

seq1  CCACACTTCAGTAGCTTTTCCTAATTCTGTTCACCTCTCAGCATTAACCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTCAGTAGCTTTTCCTAATTCTGTTCACCTCTCAGCATTAACCT  597

seq1  GCGTTCTCTGCTAGTGATGAGAAGATTGGTCACATCTTGTCTGTGGCAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCTCTGCTAGTGATGAGAAGATTGGTCACATCTTGTCTGTGGCAAA  647

seq1  TAATCCACTGTGAAAATGTCTCAGTGATATGTTCCTATGAACAAAATTAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCACTGTGAAAATGTCTCAGTGATATGTTCCTATGAACAAAATTAC  697

seq1  CAGTTTGAAACTTGCATCTCACATATTTAATGTGACTGAACATCTACAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGAAACTTGCATCTCACATATTTAATGTGACTGAACATCTACAGT  747

seq1  ACCCATTTCTGGTAACACATATACCTCTGTGTTCCTTCCTACCGGAGTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTCTGGTAACACATATACCTCTGTGTTCCTTCCTACCGGAGTGT  797

seq1  GTGATAATTCACCTATTCTTATTTCCTTATGGAGTTGGTATTTATCATAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAATTCACCTATTCTTATTTCCTTATGGAGTTGGTATTTATCATAC  847

seq1  CTTTTGTCCAGGAAAACAGGTATCTAGTAGTATTTTATTTTTCCTTTTAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCCAGGAAAACAGGTATCTAGTAGTATTTTATTTTTCCTTTTAC  897

seq1  AGCATAATAGTTTGATTAATTTAATATTTAGATTTTTGATATTTGATGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATAGTTTGATTAATTTAATATTTAGATTTTTGATATTTGATGTT  947

seq1  TCAGTAAATTGCTTGTTTGTGATGTATGGCAATATTTTGAGCAAATAGCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAATTGCTTGTTTGTGATGTATGGCAATATTTTGAGCAAATAGCA  997

seq1  TGTATAAATCAATAAAATAAAATAAATTTGAATTTAAAATTATATGTCAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATCAATAAAATAAAATAAATTTGAATTTAAAATTATATGTCAT  1047

seq1  TCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCC  1097

seq1  TGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGG  1147

seq1  TATTCCTCAGGTGAGAATTC  1166
      ||||||||||||||||||||
seq2  TATTCCTCAGGTGAGAATTC  1167