BAC Information

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BAC

Clone NameB6Ng01-215N06
Chromosome2 (Build37)
Map Location 88,777,018 - 88,879,808
singlet/doubletdoublet
Overlap geneOlfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217
Upstream geneOlfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211
Downstream geneOlfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215N06.bB6Ng01-215N06.g
ACCGA032681GA032682
length6431,104
definitionB6Ng01-215N06.b B6Ng01-215N06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,777,018 - 88,777,660)(88,878,700 - 88,879,808)
sequence
gaattctctatttttcttctcttaataatttatatacctttaggagacaa
tgtgatgcctaaaacaccaacctagttcagaacatcggcagcttcacatt
ctgaacagttctgggatgaggacctggtggtctttatgagtgcagtcacc
gcagaatggaagaattaagaggacatgatgagaccaacagcttgagtcac
tcttatatttagtgttctccattctgtatgtcagtatgtggttgtggata
aagcacattttatgttctctagcaataactacatagggtagagcatcgct
tctgtctctatgattctgccaatatactttatagtttcaaagcatgctaa
atttatttttagaaaaatagagtgatgaaaacattagtatactagaccaa
tgagattgtgtttgtaacacttaaagtcctacttagataagatagaaaat
gttcatttagtgaatttttagtttgtctggtttcaagctaaaagaaacat
ttttatttgtaacaattaaagagctttttacaaacatggttagaagaaaa
ttttttaaaaaggagaagaaataaaatatggagggaagaaaggaaggaag
aggaaggaaagggaaggaagaaaagatggaaggaaggaaggaa
gaattcagcatagagacacactattggcttattcaaacatcagcagaaaa
attatatgtacatgcagggtatcagagttctgtgaattgttgactcagtt
cagaaagccctgttatgtcctcacattcctctttatctttatggtcaagc
tgttcccaggaatgttttaactatggggcatgcccgggtttgtttttctt
tattctcagccccaggcagcctctaggctcacaaacaaaaagcaatttct
gagtactttatatgaattacaggtcttgaaatttcatctttctttcacag
ttaaggagggattttgactctattatttcttctttatccttaaagtataa
ttaaggctgtgtgagaggaacattggcaacattctccatcttcactagta
tatttcttattatggaatgaaaaattggctacaaatattgccttttcgtc
aatactcaatggaattttcttcatagagaataagaactagccatctctag
atatttcaccaaaacattgcatggtaggactgataaatataattttatat
ttttagaaatattttaattatgaaaaggtgctttgcatttgttttgtggt
caggacattatgtgtttaatgaaaacattgagtttttttctgcataactg
ggtacacaagggcatcacatacttataccttttttgtaacccaaatcaag
acacacagaagttagtaaaagtatagaagaacacaagaaagtagcactta
aaggtagtaacaacctaagtccaaaaatatttgttatagagccaagtcct
ctctgccttctctccccattttcttccttgcttccttctttatttccttc
catccttcctcccttcattttctttgcaatatactttgcttgctttctaa
gtacatattcaactctagtgaataaagtcatctttcctgtttgaatataa
atgtgaaatttcttgagactgtataaaggatattggttaaagggtgatgg
tacatcaatacacttgataactcgacgaataatgtaaacaaaataacgtt
tgttttacacttgtttatatgacactcatactgagaaactaagggaacat
gatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88777018_88777660
seq2: B6Ng01-215N06.b_44_686

seq1  GAATTCTCTATTTTTCTTCTCTTAATAATTTATATACCTTTAGGAGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTTTCTTCTCTTAATAATTTATATACCTTTAGGAGACAA  50

seq1  TGTGATGCCTAAAACACCAACCTAGTTCAGAACATCGGCAGCTTCACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGCCTAAAACACCAACCTAGTTCAGAACATCGGCAGCTTCACATT  100

seq1  CTGAACAGTTCTGGGATGAGGACCTGGTGGTCTTTATGAGTGCAGTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAGTTCTGGGATGAGGACCTGGTGGTCTTTATGAGTGCAGTCACC  150

seq1  GCAGAATGGAAGAATTAAGAGGACATGATGAGACCAACAGCTTGAGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGGAAGAATTAAGAGGACATGATGAGACCAACAGCTTGAGTCAC  200

seq1  TCTTATATTTAGTGTTCTCCATTCTGTATGTCAGTATGTGGTTGTGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATTTAGTGTTCTCCATTCTGTATGTCAGTATGTGGTTGTGGATA  250

seq1  AAGCACATTTTATGTTCTCTAGCAATAACTACATAGGGTAGAGCATCGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATTTTATGTTCTCTAGCAATAACTACATAGGGTAGAGCATCGCT  300

seq1  TCTGTCTCTATGATTCTGCCAATATACTTTATAGTTTCAAAGCATGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTATGATTCTGCCAATATACTTTATAGTTTCAAAGCATGCTAA  350

seq1  ATTTATTTTTAGAAAAATAGAGTGATGAAAACATTAGTATACTAGACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTAGAAAAATAGAGTGATGAAAACATTAGTATACTAGACCAA  400

seq1  TGAGATTGTGTTTGTAACACTTAAAGTCCTACTTAGATAAGATAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTGTGTTTGTAACACTTAAAGTCCTACTTAGATAAGATAGAAAAT  450

seq1  GTTCATTTAGTGAATTTTTAGTTTGTCTGGTTTCAAGCTAAAAGAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTAGTGAATTTTTAGTTTGTCTGGTTTCAAGCTAAAAGAAACAT  500

seq1  TTTTATTTGTAACAATTAAAGAGCTTTTTACAAACATGGTTAGAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTAACAATTAAAGAGCTTTTTACAAACATGGTTAGAAGAAAA  550

seq1  TTTTTTAAAAAGGAGAAGAAATAAAATATGGAGGGAAGAAAGGAAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAAAGGAGAAGAAATAAAATATGGAGGGAAGAAAGGAAGGAAG  600

seq1  AGGAAGGAAAGGGAAGGAAGAAAAGATGGAAGGAAGGAAGGAA  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAAGGGAAGGAAGAAAAGATGGAAGGAAGGAAGGAA  643

seq1: chr2_88878700_88879808
seq2: B6Ng01-215N06.g_69_1172 (reverse)

seq1  GATCATGTTCCCTTAGTTTTCTTCAGTATGGGTTGTCATATAA--CAGTG  48
      |||||||||||||||||||   |||||||| | ||||||||||   ||||
seq2  GATCATGTTCCCTTAGTTT--CTCAGTATGAG-TGTCATATAAACAAGTG  47

seq1  TAAAACAAACGTTTTATTTTTGTTTACAATATTTCGTCGAGTTTATC-AG  97
      |||||||||||||    ||||||||||| || ||||||||| ||||| ||
seq2  TAAAACAAACGTT---ATTTTGTTTACATTA-TTCGTCGAG-TTATCAAG  92

seq1  TGTATTGATGTACCATCACCCTTT-ACCAATATCCTTTATACAGTCTCAA  146
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTATTGATGTACCATCACCCTTTAACCAATATCCTTTATACAGTCTCAA  142

seq1  GAAATTTCACATTTATATTCAAACAGGAAAGATGACTTTATTCACTAGAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCACATTTATATTCAAACAGGAAAGATGACTTTATTCACTAGAG  192

seq1  TTGAATATGTACTTAGAAAGCAAGCAAAGTATTATTGCAAAGAAAATGAA  246
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGAATATGTACTTAGAAAGCAAGCAAAGTA-TATTGCAAAGAAAATGAA  241

seq1  GGGAGGAAGGATGGAAGGAAATAAAGAAGGAAGCAAGGAAGAAAATGGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAGGATGGAAGGAAATAAAGAAGGAAGCAAGGAAGAAAATGGGG  291

seq1  AGAGAAGGCAGAGAGGACTTGGCTCTATAACAAATATTTTTGGACTTAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGCAGAGAGGACTTGGCTCTATAACAAATATTTTTGGACTTAGG  341

seq1  TTGTTACTACCTTTAAGTGCTACTTTCTTGTGTTCTTCTATACTTTTACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTACTACCTTTAAGTGCTACTTTCTTGTGTTCTTCTATACTTTTACT  391

seq1  AACTTCTGTGTGTCTTGATTTGGGTTACAAAAAAGGTATAAGTATGTGAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGTGTGTCTTGATTTGGGTTACAAAAAAGGTATAAGTATGTGAT  441

seq1  GCCCTTGTGTACCCAGTTATGCAGAAAAAAACTCAATGTTTTCATTAAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGTGTACCCAGTTATGCAGAAAAAAACTCAATGTTTTCATTAAAC  491

seq1  ACATAATGTCCTGACCACAAAACAAATGCAAAGCACCTTTTCATAATTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATGTCCTGACCACAAAACAAATGCAAAGCACCTTTTCATAATTAA  541

seq1  AATATTTCTAAAAATATAAAATTATATTTATCAGTCCTACCATGCAATGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTAAAAATATAAAATTATATTTATCAGTCCTACCATGCAATGT  591

seq1  TTTGGTGAAATATCTAGAGATGGCTAGTTCTTATTCTCTATGAAGAAAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAAATATCTAGAGATGGCTAGTTCTTATTCTCTATGAAGAAAAT  641

seq1  TCCATTGAGTATTGACGAAAAGGCAATATTTGTAGCCAATTTTTCATTCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGAGTATTGACGAAAAGGCAATATTTGTAGCCAATTTTTCATTCC  691

seq1  ATAATAAGAAATATACTAGTGAAGATGGAGAATGTTGCCAATGTTCCTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGAAATATACTAGTGAAGATGGAGAATGTTGCCAATGTTCCTCT  741

seq1  CACACAGCCTTAATTATACTTTAAGGATAAAGAAGAAATAATAGAGTCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCCTTAATTATACTTTAAGGATAAAGAAGAAATAATAGAGTCAA  791

seq1  AATCCCTCCTTAACTGTGAAAGAAAGATGAAATTTCAAGACCTGTAATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTCCTTAACTGTGAAAGAAAGATGAAATTTCAAGACCTGTAATTC  841

seq1  ATATAAAGTACTCAGAAATTGCTTTTTGTTTGTGAGCCTAGAGGCTGCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGTACTCAGAAATTGCTTTTTGTTTGTGAGCCTAGAGGCTGCCT  891

seq1  GGGGCTGAGAATAAAGAAAAACAAACCCGGGCATGCCCCATAGTTAAAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGAGAATAAAGAAAAACAAACCCGGGCATGCCCCATAGTTAAAAC  941

seq1  ATTCCTGGGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGACATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGGAACAGCTTGACCATAAAGATAAAGAGGAATGTGAGGACATA  991

seq1  ACAGGGCTTTCTGAACTGAGTCAACAATTCACAGAACTCTGATACCCTGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTTTCTGAACTGAGTCAACAATTCACAGAACTCTGATACCCTGC  1041

seq1  ATGTACATATAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATATAATTTTTCTGCTGATGTTTGAATAAGCCAATAGTGTGTCT  1091

seq1  CTATGCTGAATTC  1109
      |||||||||||||
seq2  CTATGCTGAATTC  1104