BAC Information

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BAC

Clone NameB6Ng01-216F17
Chromosome2 (Build37)
Map Location 76,742,957 - 76,876,181
singlet/doubletdoublet
Overlap geneTtn
Upstream geneAgps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533, BC003993, LOC667920
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216F17.bB6Ng01-216F17.g
ACCGA033067GA033068
length2851,101
definitionB6Ng01-216F17.b B6Ng01-216F17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,742,957 - 76,743,241)(76,875,082 - 76,876,181)
sequence
caaggtattgtctgtatggcaacactcagctccaggctgagaaccaccct
ggccgggccactggagcagctttcctagaatctcagagggtctctactgt
gtaataaggttccaaagaaaaagatgctccaaagaactctttttatgagg
tggatgagcagggtgccttccccttgacattctcaaggagtaagattcac
acccaagagcttccctcctacccagggagactctcctctatcagtgctga
gcctgaggaagccattcaaaaaaggatgaggggga
gaattcttagtttatgccccatctgtgtaatctacgcccaccaggtatgg
agaatcattagctcacgggttaaagaatgggtaatggagctttaatgatg
gtcttcactggagatcccacccttcctgcaggtcacaggcaggtgcaaga
gggagcatgctggaaagagagtgagaggtcaggagaagctgctaggatcc
ggttcaagaggagggaccatggagaaggtgctggcatggcttttactata
gcagtgtgctacaacgctgcatgctctccactcttcttctggtccgcatt
ctggtgaaaccacagtgtattctgccctctacacaggggtgcagcctctt
ctgcttccctatgctacagtttacacttctgtgagctctgtttagttttg
attcgagaatcatccagcgtgtcttggttctcccggggctatgaaagatt
catggccattttcaaaaaagatctttttctaaattttcttagttctttcc
ttccctttcatcttcttccttctctttttccgttgctttgcccaaacatc
tctcccttcggagatggcgcagctctgcaactacagagagagcatcggtg
aagcaggctgcatgtgttcccagccccgcctctctgggtttccatgtccc
tgaagagctgtggcatttaagaagcttggtccccctgcctaaggccttcc
agaacttctatttacagggacagcctcatgatgaacttgcgctcagagcc
agcagagatgacatatgacccttccagtcatagtagggacgccccaggat
tgtctgtaccccttcaggaatgagcaagccatacacgtgggttttggttt
aggaatcaggtatcagttaacacactcataattactaagagaagttatcg
ttctctatcgcttctactttctaatccaattaatctttaggctaaccttc
acactgaaggaattttggaaaccttgagtcttttttttactatttgttct
tgtgagacccagcaggcatgttcgaaggtggtgcatcctaatgctggatt
cccagtattcaagctagtgtcataatatcagaagaatatcgctgaacctt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76742957_76743241
seq2: B6Ng01-216F17.b_52_336

seq1  CAAGGTATTGTCTGTATGGCAACACTCAGCTCCAGGCTGAGAACCACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTATTGTCTGTATGGCAACACTCAGCTCCAGGCTGAGAACCACCCT  50

seq1  GGCCGGGCCACTGGAGCAGCTTTCCTAGAATCTCAGAGGGTCTCTACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGGCCACTGGAGCAGCTTTCCTAGAATCTCAGAGGGTCTCTACTGT  100

seq1  GTAATAAGGTTCCAAAGAAAAAGATGCTCCAAAGAACTCTTTTTATGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGGTTCCAAAGAAAAAGATGCTCCAAAGAACTCTTTTTATGAGG  150

seq1  TGGATGAGCAGGGTGCCTTCCCCTTGACATTCTCAAGGAGTAAGATTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAGCAGGGTGCCTTCCCCTTGACATTCTCAAGGAGTAAGATTCAC  200

seq1  ACCCAAGAGCTTCCCTCCTACCCAGGGAGACTCTCCTCTATCAGTGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGCTTCCCTCCTACCCAGGGAGACTCTCCTCTATCAGTGCTGA  250

seq1  GCCTGAGGAAGCCATTCAAAAAAGGATGAGGGGGA  285
      |||||||||||||||||||||||||||||||||||
seq2  GCCTGAGGAAGCCATTCAAAAAAGGATGAGGGGGA  285

seq1: chr2_76875082_76876181
seq2: B6Ng01-216F17.g_67_1167 (reverse)

seq1  AAAGG-TCAACGATATTCTTTCTGATTATCATGCCACTAGCTGGGTGTTT  49
      ||||| ||| |||||||| |||||| ||| ||| |||||||| |     |
seq2  AAAGGTTCAGCGATATTC-TTCTGA-TATTATGACACTAGCTTGAATACT  48

seq1  GTGAAATCCAGCATATGGATGCCACA-CTTCG-ACATGCCTGCTGTGTCT  97
      | | ||||||||||  ||||||  || ||||| |||||||||||| ||||
seq2  G-GGAATCCAGCATTAGGATGCACCACCTTCGAACATGCCTGCTGGGTCT  97

seq1  CCACAAGAACAAATAGT-AAAAAAAGACTCAAGGTTTCCAAAATTCCTTC  146
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  -CACAAGAACAAATAGTAAAAAAAAGACTCAAGGTTTCCAAAATTCCTTC  146

seq1  AGTGTGAAAGGGTAGCCTAAAGATTAATTGGATTAG-AAGTAGAAGCGAT  195
      |||||| |||| |||||||||||||||||||||||| |||||||||||||
seq2  AGTGTG-AAGGTTAGCCTAAAGATTAATTGGATTAGAAAGTAGAAGCGAT  195

seq1  AGAGAACGAT-ACTTCTCTTAGTAATTATGAGTGTGTTAACTGATACCTG  244
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACGATAACTTCTCTTAGTAATTATGAGTGTGTTAACTGATACCTG  245

seq1  ATTCCTAAACCAAAACCCACGTGTATGGCTTGCTCATTCCTGAAGGGGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAAACCAAAACCCACGTGTATGGCTTGCTCATTCCTGAAGGGGTA  295

seq1  CAGACAATCCTGGGGCGTCCCTACTATGACTGGAAGGGTCATATGTCATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATCCTGGGGCGTCCCTACTATGACTGGAAGGGTCATATGTCATC  345

seq1  TCTGCTGGCTCTGAGCGCAAGTTCATCATGAGGCTGTCCCTGTAAATAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGCTCTGAGCGCAAGTTCATCATGAGGCTGTCCCTGTAAATAGA  395

seq1  AGTTCTGGAAGGCCTTAGGCAGGGGGACCAAGCTTCTTAAATGCCACAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGAAGGCCTTAGGCAGGGGGACCAAGCTTCTTAAATGCCACAGC  445

seq1  TCTTCAGGGACATGGAAACCCAGAGAGGCGGGGCTGGGAACACATGCAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGGACATGGAAACCCAGAGAGGCGGGGCTGGGAACACATGCAGC  495

seq1  CTGCTTCACCGATGCTCTCTCTGTAGTTGCAGAGCTGCGCCATCTCCGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCACCGATGCTCTCTCTGTAGTTGCAGAGCTGCGCCATCTCCGAA  545

seq1  GGGAGAGATGTTTGGGCAAAGCAACGGAAAAAGAGAAGGAAGAAGATGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGATGTTTGGGCAAAGCAACGGAAAAAGAGAAGGAAGAAGATGAA  595

seq1  AGGGAAGGAAAGAACTAAGAAAATTTAGAAAAAGATCTTTTTTGAAAATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGGAAAGAACTAAGAAAATTTAGAAAAAGATCTTTTTTGAAAATG  645

seq1  GCCATGAATCTTTCATAGCCCCGGGAGAACCAAGACACGCTGGATGATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGAATCTTTCATAGCCCCGGGAGAACCAAGACACGCTGGATGATTC  695

seq1  TCGAATCAAAACTAAACAGAGCTCACAGAAGTGTAAACTGTAGCATAGGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATCAAAACTAAACAGAGCTCACAGAAGTGTAAACTGTAGCATAGGG  745

seq1  AAGCAGAAGAGGCTGCACCCCTGTGTAGAGGGCAGAATACACTGTGGTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAGAGGCTGCACCCCTGTGTAGAGGGCAGAATACACTGTGGTTT  795

seq1  CACCAGAATGCGGACCAGAAGAAGAGTGGAGAGCATGCAGCGTTGTAGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAATGCGGACCAGAAGAAGAGTGGAGAGCATGCAGCGTTGTAGCA  845

seq1  CACTGCTATAGTAAAAGCCATGCCAGCACCTTCTCCATGGTCCCTCCTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTATAGTAAAAGCCATGCCAGCACCTTCTCCATGGTCCCTCCTCT  895

seq1  TGAACCGGATCCTAGCAGCTTCTCCTGACCTCTCACTCTCTTTCCAGCAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCGGATCCTAGCAGCTTCTCCTGACCTCTCACTCTCTTTCCAGCAT  945

seq1  GCTCCCTCTTGCACCTGCCTGTGACCTGCAGGAAGGGTGGGATCTCCAGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCTTGCACCTGCCTGTGACCTGCAGGAAGGGTGGGATCTCCAGT  995

seq1  GAAGACCATCATTAAAGCTCCATTACCCATTCTTTAACCCGTGAGCTAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCATCATTAAAGCTCCATTACCCATTCTTTAACCCGTGAGCTAAT  1045

seq1  GATTCTCCATACCTGGTGGGCGTAGATTACACAGATGGGGCATAAACTAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCCATACCTGGTGGGCGTAGATTACACAGATGGGGCATAAACTAA  1095

seq1  GAATTC  1100
      ||||||
seq2  GAATTC  1101