BAC Information

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BAC

Clone NameB6Ng01-216K01
Chromosome2 (Build37)
Map Location 39,825,004 - 39,826,147
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC624652, LOC100041071, 1700123D08Rik, Rpl35, Arpc5l, Golga1, A930041I02Rik, LOC100042584, Ppp6c, Vmn2r-ps2, Ppia-ps2_560.1
Downstream geneLOC100042604, Magmas-ps, LOC666531, Lrp1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216K01.bB6Ng01-216K01.g
ACCGA033270GA033271
length1,131402
definitionB6Ng01-216K01.b B6Ng01-216K01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttactttaccagcgtgaatatttctttagcagtgaaactactg
atttataaggtatgtctatctttcaattttttagaatttgatgaatatgc
ttttctaagaagtacacttaaaatcacacaaaatacaattgttcttccca
gagacaaacattcttttacctgaaaaaaaaagaattagaaactaaagtta
taacttttgaaatttctgcttttagatatgtaaatttgaacaactcctca
tatgtattgatcattcacattataatgaggcagcatttatttacatataa
acactgcaccagaatatatatactttattcatatgtattatcatttctgc
acatggaaactcactgttttatttcagttactgtgttaccataaccacac
ttcatctaacactattctctccatctatgcagaaccttatctaaatcaat
tctttttttaatttttttattatttaaatgcattttatacatcaaacata
atactgatattgagtattttgagaattaaataatacatagaaatttgttc
aacttttatattcatattctttattacccaaatatatcaataatgaatat
ttaatactatccataactgaggttcctatatctaatgttgaatactaaat
tgtttcaaaatatacaaagtattctttgggatttaagcatagtaaaagag
cataaactatgataaatgaatcattaagaagtatattcaaaagctcttat
atgatactacctgagagtggtattaaataagtgagagagtatttaaaatg
tattatatatctgtgtacattgtctaacaatcagttactttaaaagtatt
atcagtgtttctaggagagaaattattttatcagtaagtatattttagaa
tttcaaatagcaaaatctctttgaaattaaacattaaaaatgctaattca
gcatagtgagaaaattatcaataatatttccatgatgttatagaacatga
tttaatattttaattgttaatattccataaacagaataattattttagaa
tatatttcattgtatgtctcccttcgttctggatttattaattgatactg
tcctgtggtcctctgtagttgggctaagggt

tatggtttagtgttttgttatgcttttctgttttattttttaatctggat
gtttgtttgttctctctctctctctctctctctctctctctctctctctc
tcttttgtgcgagaggtgtgtgtgtgtgtttttttttttttttttttttt
ttatctattttttttttttcacttttatttatttttttttttatatacaa
agagaaaaagcaatgtgtcgggaatatagaaaggatcgggagatgtctat
ctccccccaaatttttgtttccctctcttttttttttttctctttttctt
tatctagagtttgtctatggagagaaagaagaatctatctctctcagttg
tgtatttgtattttatgttatattatagttatatactgcgcacatctctt
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_39825004_39826147
seq2: B6Ng01-216K01.b_45_1175

seq1  GAATTCCTTACTTTACCAGCGTGAATATTTCTTTAGCAGTGAAACTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACTTTACCAGCGTGAATATTTCTTTAGCAGTGAAACTACTG  50

seq1  ATTTATAAGGTATGTCTATCTTTCAATTTTTTAGAATTTGATGAATATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAGGTATGTCTATCTTTCAATTTTTTAGAATTTGATGAATATGC  100

seq1  TTTTCTAAGAAGTACACTTAAAATCACACAAAATACAATTGTTCTTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAGAAGTACACTTAAAATCACACAAAATACAATTGTTCTTCCCA  150

seq1  GAGACAAACATTCTTTTACCTGAAAAAAAAAGAATTAGAAACTAAAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAACATTCTTTTACCTGAAAAAAAAAGAATTAGAAACTAAAGTTA  200

seq1  TAACTTTTGAAATTTCTGCTTTTAGATATGTAAATTTGAACAACTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTGAAATTTCTGCTTTTAGATATGTAAATTTGAACAACTCCTCA  250

seq1  TATGTATTGATCATTCACATTATAATGAGGCAGCATTTATTTACATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTGATCATTCACATTATAATGAGGCAGCATTTATTTACATATAA  300

seq1  ACACTGCACCAGAATATATATACTTTATTCATATGTATTATCATTTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACCAGAATATATATACTTTATTCATATGTATTATCATTTCTGC  350

seq1  ACATGGAAACTCACTGTTTTATTTCAGTTACTGTGTTACCATAACCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAACTCACTGTTTTATTTCAGTTACTGTGTTACCATAACCACAC  400

seq1  TTCATCTAACACTATTCTCTCCATCTATGCAGAACCTTATCTAAATCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAACACTATTCTCTCCATCTATGCAGAACCTTATCTAAATCAAT  450

seq1  TCTTTTTTTAATTTTTTTATTATTTAAATGCATTTTATACATCAAACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTAATTTTTTTATTATTTAAATGCATTTTATACATCAAACATA  500

seq1  ATACTGATATTGAGTATTTTGAGAATTAAATAATACATAGAAATTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGATATTGAGTATTTTGAGAATTAAATAATACATAGAAATTTGTTC  550

seq1  AACTTTTATATTCATATTCTTTATTACCCAAATATATCAATAATGAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATATTCATATTCTTTATTACCCAAATATATCAATAATGAATAT  600

seq1  TTAATACTATCCATAACTGAGGTTCCTATATCTAATGTTGAATACTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTATCCATAACTGAGGTTCCTATATCTAATGTTGAATACTAAAT  650

seq1  TGTTTCAAAATATACAAAGTATTCTTTGGGATTTAAGCATAGTAAAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAAATATACAAAGTATTCTTTGGGATTTAAGCATAGTAAAAGAG  700

seq1  CATAAACTATGATAAATGAATCATTAAGAAGTATATTCAAAAGCTCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACTATGATAAATGAATCATTAAGAAGTATATTCAAAAGCTCTTAT  750

seq1  ATGATACTACCTGAGAGTGGTATTAAATAAGTGAGAGAGTATTTAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTACCTGAGAGTGGTATTAAATAAGTGAGAGAGTATTTAAAATG  800

seq1  TATTATATATCTGTGTACATTGTCTAACAATCAGTTACTTTAAAAGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATATCTGTGTACATTGTCTAACAATCAGTTACTTTAAAAGTATT  850

seq1  ATCAGTGTTTCTAGGAGAGAAATTATTTTATCAGTAAGTATATTTTAAGA  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCAGTGTTTCTAGGAGAGAAATTATTTTATCAGTAAGTATATTTT-AGA  899

seq1  ATTTCAAAATAGCAAAATCTCTTTGAAATTAAACATTAAAAAATGCTAAT  950
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTC-AAATAGCAAAATCTCTTTGAAATTAAACATT-AAAAATGCTAAT  947

seq1  TCAAGCATAGTGAGAAAATTATCAATAATATTTCCATGATGTTTATAGAA  1000
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TC-AGCATAGTGAGAAAATTATCAATAATATTTCCATGATG-TTATAGAA  995

seq1  CATGATTTTAATATTTTAATTGTTAATATTCAATAAACAGAATAATTATT  1050
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATGA-TTTAATATTTTAATTGTTAATATTCCATAAACAGAATAATTATT  1044

seq1  TTAAGATATATTTCATTGTATGTCTCCCTTTTCGTTTCTGATTTTATTAA  1100
      |||  |||||||||||||||||||||||  |||| |||||  ||||||||
seq2  TTAGAATATATTTCATTGTATGTCTCCC--TTCG-TTCTGGATTTATTAA  1091

seq1  TTTGGATACTGTCCCTGT-GTCCTCTGGTTAGTTTGGCTAAGGGT  1144
      ||  |||||||| ||||| ||||||||  ||||| ||||||||||
seq2  TT--GATACTGT-CCTGTGGTCCTCTG--TAGTTGGGCTAAGGGT  1131


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