BAC Information

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BAC

Clone NameB6Ng01-217C03
Chromosome2 (Build37)
Map Location 17,080,141 - 17,081,272
singlet/doubletsinglet
Overlap genenone
Upstream genePlxdc2, 4930515L03Rik, LOC383665
Downstream geneNebl, LOC100041319, LOC100041047, 1700113O17Rik, A930004D18Rik, 2810030E01Rik, Mllt10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217C03.bB6Ng01-217C03.g
ACCGA033626GA033627
length1,1731,116
definitionB6Ng01-217C03.b B6Ng01-217C03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtaccaaggagctaaagggatcttcaacccta
tagtggaacaacattatgaactaaccagtaccctgagcctcttggactct
agctgcatattgtattcaaagaatggcctagtcggcatcactgcaaggag
agtcattgaactgcgaactttgtgtgcccagtatcagggaacgcaggtcc
aaagagggaatgtgattggctaa
gaattcttgcctgagaatatgatttttcctcctgggctgggtgtcttatt
ccaacttggcccaggcaatgtccttagctttttgccagaacaaatttgtc
actcacagtaggaaaactattgctaaggctcaactgactctatatccttc
tttgttctgcagaaaaatgctgacatcaagccagcttggaggctgcagca
ctgaccactgacaggctggagcgaatcaagccccaattcagcctttgctg
cctggagaccacctgtctctctctggatgttttctcagtggtagaggaaa
atatggctctgtgagagtcatcaccatacaaattcaatatttatatgttt
cccatatgataggcacggaattactattcttagaagaatgaaagaaatta
gagagtgatttttgtagttatcaaatttatctgaagatcatgtttttctc
agtgctgtaatctacttcaaggaaataatggcagccactgttatcgttga
aatatacaacacccatgttctccacatacaaagctcaagtgttaaaggct
aggttgccagttaatggagatttggagctgttgaagcaagaggactctga
attcattaaccacattgaagcagtcatagccaaaggagttttaggaacct
acagccagttggagaagtaggcacagaggggactgatgttgaaagatata
cctggtcttgaactcttccttctactttctcatcaccatgaggcatctct
gaggcctctgcaatgactcctgccttatctcagacccaaagtcagccaac
tatagactaaaacctctgaatccatgagccaaggtgagtgtattcccctt
tacattgttttccttgggtgtttgtcacagtgatacaaggacacttttga
gatcatctcaataagtatgggcaagctcccccaatttcgttcaaaccaag
ggcacaagtaatggtttcaagagtacagcaaactctatgggtcctgtcat
gggaaagatgctcaagttaaatgtctacaagagttcagcagtaagtgagg
tgagccattattatacaacagccacagtaggaatgcagctaatagtctga
actgctttagttgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_17080141_17081272
seq2: B6Ng01-217C03.g_66_1181

seq1  GAATTCTTGCCTGAGAATATGATTTTTCCTCCTGGGCTGGGTGTCTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCTGAGAATATGATTTTTCCTCCTGGGCTGGGTGTCTTATT  50

seq1  CCAACTTGGCCCAGGCAATGTCCTTAGCTTTTTGCCAGAACAAATTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTGGCCCAGGCAATGTCCTTAGCTTTTTGCCAGAACAAATTTGTC  100

seq1  ACTCACAGTAGGAAAACTATTGCTAAGGCTCAACTGACTCTATATCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGTAGGAAAACTATTGCTAAGGCTCAACTGACTCTATATCCTTC  150

seq1  TTTGTTCTGCAGAAAAATGCTGACATCAAGCCAGCTTGGAGGCTGCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTGCAGAAAAATGCTGACATCAAGCCAGCTTGGAGGCTGCAGCA  200

seq1  CTGACCACTGACAGGCTGGAGCGAATCAAGCCCCAATTCAGCCTTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCACTGACAGGCTGGAGCGAATCAAGCCCCAATTCAGCCTTTGCTG  250

seq1  CCTGGAGACCACCTGTCTCTCTCTGGATGTTTTCTCAGTGGTAGAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGACCACCTGTCTCTCTCTGGATGTTTTCTCAGTGGTAGAGGAAA  300

seq1  ATATGGCTCTGTGAGAGTCATCACCATACAAATTCAATATTTATATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTCTGTGAGAGTCATCACCATACAAATTCAATATTTATATGTTT  350

seq1  CCCATATGATAGGCACGGAATTACTATTCTTAGAAGAATGAAAGAAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATGATAGGCACGGAATTACTATTCTTAGAAGAATGAAAGAAATTA  400

seq1  GAGAGTGATTTTTGTAGTTATCAAATTTATCTGAAGATCATGTTTTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGATTTTTGTAGTTATCAAATTTATCTGAAGATCATGTTTTTCTC  450

seq1  AGTGCTGTAATCTACTTCAAGGAAATAATGGCAGCCACTGTTATCGTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGTAATCTACTTCAAGGAAATAATGGCAGCCACTGTTATCGTTGA  500

seq1  AATATACAACACCCATGTTCTCCACATACAAAGCTCAAGTGTTAAAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAACACCCATGTTCTCCACATACAAAGCTCAAGTGTTAAAGGCT  550

seq1  AGGTTGCCAGTTAATGGAGATTTGGAGCTGTTGAAGCAAGAGGACTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCCAGTTAATGGAGATTTGGAGCTGTTGAAGCAAGAGGACTCTGA  600

seq1  ATTCATTAACCACATTGAAGCAGTCATAGCCAAAGGAGTTTTAGGAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAACCACATTGAAGCAGTCATAGCCAAAGGAGTTTTAGGAACCT  650

seq1  ACAGCCAGTTGGAGAAGTAGGCACAGAGGGGACTGATGTTGAAAGATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGTTGGAGAAGTAGGCACAGAGGGGACTGATGTTGAAAGATATA  700

seq1  CCTGGTCTTGAACTCTTCCTTCTACTTTCTCATCACCATGAGGCATCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTTGAACTCTTCCTTCTACTTTCTCATCACCATGAGGCATCTCT  750

seq1  GAGGCCTCTGCAATGACTCCTGCCTTATCTCAGACCCAAAGTCAGCCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTCTGCAATGACTCCTGCCTTATCTCAGACCCAAAGTCAGCCAAC  800

seq1  TATAGACTAAAACCTCTGAATCCATGAGCCAAGGTGAGTGTATTCCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTAAAACCTCTGAATCCATGAGCCAAGGTGAGTGTATTCCCCTT  850

seq1  TACATTGTTTTCCTTGGGTGTTTGTCACAGTGATACAAGGACACTTTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTTTCCTTGGGTGTTTGTCACAGTGATACAAGGACACTTTTGA  900

seq1  GATCATCTCAAATAAGTATGGGCAAGCTCCCCCAATTTCGTTCAAACCAA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCTC-AATAAGTATGGGCAAGCTCCCCCAATTTCGTTCAAACCAA  949

seq1  GGGCACAAGTAATGGTTTCAAGAGTACAGCAAACTCTATGGGTCCTTGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGCACAAGTAATGGTTTCAAGAGTACAGCAAACTCTATGGGTCC-TGTC  998

seq1  ATTGGGAAAGATGCTTCAAGTTTAAATGTCTACAGGAGTTTCCAAGGCAG  1050
      | |||||||||||| ||||| ||||||||||||| |||||  ||  ||||
seq2  A-TGGGAAAGATGC-TCAAG-TTAAATGTCTACAAGAGTT--CA--GCAG  1041

seq1  TAAGTGAGGTGAGCCATATATAATACAACAGGCCACAGTAGGAAATGCAG  1100
      ||||||||||||||||| ||| |||||||| ||||||||||| |||||||
seq2  TAAGTGAGGTGAGCCAT-TATTATACAACA-GCCACAGTAGG-AATGCAG  1088

seq1  CAGAGTAGTCTGGAAACTGCTTTTAGTTGCCA  1132
      |  | |||||||  |||||| |||||||||||
seq2  C-TAATAGTCTG--AACTGC-TTTAGTTGCCA  1116