BAC Information

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BAC

Clone NameB6Ng01-217M08
Chromosome2 (Build37)
Map Location 143,756,323 - 143,757,268
singlet/doubletsinglet
Overlap geneDstn
Upstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534
Downstream geneRrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217M08.bB6Ng01-217M08.g
ACCGA034081GA034082
length9361,047
definitionB6Ng01-217M08.b B6Ng01-217M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaggtcattctctagagcgtactgtgatcactccagttagtc
atcctactgaagagaatagtgagcataatgaagaaggcagactccaggct
acagtaacgtaggaccctaaattacagcatccctactccagctgttttag
ggaaatgtgtgccaatagtagctatgccagtatttctttgctactgtcaa
atgtggtagccatcctgtgagctggaatactggaaatacataataatgaa
aaaatgctaatttgattttaataaatttaacaagaagcacataaaactgg
ctcaatattaaaaatgtttggggcaattttttatttaactttttattact
tttttggtgaatttcatatcagcaccccaattgcactcccctcctgatcc
ctttgtatgcatcccccacccttacaagcttccccctcacccacaccact
gcactgccgacaagggcccactctctgagtgctacaacaggtaaggggca
gggcgaactctccaactctccagacaggtgggcaaacaaatttacaaact
gtattacacaaccctcagtcctgggaaacaacacactgtttttgttatga
ctcacattacttggaacttgctattttactatgcaaaaaattaataatac
atctaaggcaaagatttcacattcaatataaaatatatatataacaactg
actatttgtgagggcaaggaagcaatcttgaggtaaacaaactgctgaat
gatttcttcttcatttttctttatcatcttataagacagggtttctctgt
atagccctatattatttttgaaacagggttcataacatagtacagctagc
atcaaattcataattatctttctcagcaagaagcaaagtactgggattat
aggtgaaccaccgacccctgccactgcttattaaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaaccaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
caaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgataagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagac
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggacatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactattcccctccttagattttggga
acaaaacacccatggaaggaattacagagacaaagtttggagctgagatg
aaaggatggaccacgtagagactgccatatccagggatccaccccataat
cagcatctaaacgctgacatcattgcatactacaagcaagatttttattg
aatggacccagatgtagctgtctcttgtgagaactatgcctggggcctac
taaacacagagtggatgcttcacagtgcagcttatggatggatcataagg
gctcctaatggaagagctagagaagttagccaaggagcttaaagggaatc
ttgcaatccttattggtggaacacattatgaactaaccgagtacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143756323_143757268
seq2: B6Ng01-217M08.b_45_980 (reverse)

seq1  TTTTAATAAACAGTGGCAGGGGTTGGTGGTTCAACCTATAATCCCAGTAC  50
      ||||||||| ||||||||||||| |||||||| |||||||||||||||||
seq2  TTTTAATAAGCAGTGGCAGGGGTCGGTGGTTC-ACCTATAATCCCAGTAC  49

seq1  TTTGCTTCTTGCTGAAGAAAGATAATTATGAATTTGATGCTAGCCTGTAC  100
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  TTTGCTTCTTGCTG-AGAAAGATAATTATGAATTTGATGCTAG-CTGTAC  97

seq1  TATGTAATGAAACCCTGTTTCAAAAATAAATATTAGGGCTATACAGAGAA  150
      ||||| ||| ||||||||||||||||| |||| |||||||||||||||||
seq2  TATGTTATG-AACCCTGTTTCAAAAAT-AATA-TAGGGCTATACAGAGAA  144

seq1  ACCCTGTCTCAAAAAAAAGAAAAAAGAAAAAAGAAAGAAAGAAAAACATT  200
      |||||||||   | || |  | ||||||||| | |||||   ||| ||||
seq2  ACCCTGTCT--TATAAGATGATAAAGAAAAATG-AAGAA--GAAATCATT  189

seq1  -AGCAGTTTGTTTACCTCAAGATTGCTTCCTTGCCCTCACAAATAGTCAG  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTTGTTTACCTCAAGATTGCTTCCTTGCCCTCACAAATAGTCAG  239

seq1  TTGTTATAAATATATTTAATATTAAATGTGAAATCTTTGCCTTAGATGTA  299
      |||||||| |||||||| ||||| ||||||||||||||||||||||||||
seq2  TTGTTATATATATATTTTATATTGAATGTGAAATCTTTGCCTTAGATGTA  289

seq1  TTATTAATTTTTTGCATAGTAAAATAGCAAGTTCCAAGTAATGTGAGTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTTTTGCATAGTAAAATAGCAAGTTCCAAGTAATGTGAGTCA  339

seq1  TAACAAAAACAGTGTGTTGTTTCCCAGGACTGAGGGTTGTGTAATACAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAACAGTGTGTTGTTTCCCAGGACTGAGGGTTGTGTAATACAGT  389

seq1  TTGTAAATTTGTTTGCCCACCTGTCTGGAGAGTTGGAGAGTTCGCCCTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAATTTGTTTGCCCACCTGTCTGGAGAGTTGGAGAGTTCGCCCTGC  439

seq1  CCCTTACCTGTTGTAGCACTCAGAGAGTGGGCCCTTGTCGGCAGTGCAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACCTGTTGTAGCACTCAGAGAGTGGGCCCTTGTCGGCAGTGCAGT  489

seq1  GGTGTGGGTGAGGGGGAAGCTTGTAAGGGTGGGGGATGCATACAAAGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGGTGAGGGGGAAGCTTGTAAGGGTGGGGGATGCATACAAAGGGA  539

seq1  TCAGGAGGGGAGTGCAATTGGGGTGCTGATATGAAATTCACCAAAAAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGGGAGTGCAATTGGGGTGCTGATATGAAATTCACCAAAAAAGT  589

seq1  AATAAAAAGTTAAATAAAAAATTGCCCCAAACATTTTTAATATTGAGCCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAGTTAAATAAAAAATTGCCCCAAACATTTTTAATATTGAGCCA  639

seq1  GTTTTATGTGCTTCTTGTTAAATTTATTAAAATCAAATTAGCATTTTTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTGCTTCTTGTTAAATTTATTAAAATCAAATTAGCATTTTTTC  689

seq1  ATTATTATGTATTTCCAGTATTCCAGCTCACAGGATGGCTACCACATTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATGTATTTCCAGTATTCCAGCTCACAGGATGGCTACCACATTTG  739

seq1  ACAGTAGCAAAGAAATACTGGCATAGCTACTATTGGCACACATTTCCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGCAAAGAAATACTGGCATAGCTACTATTGGCACACATTTCCCTA  789

seq1  AAACAGCTGGAGTAGGGATGCTGTAATTTAGGGTCCTACGTTACTGTAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTGGAGTAGGGATGCTGTAATTTAGGGTCCTACGTTACTGTAGC  839

seq1  CTGGAGTCTGCCTTCTTCATTATGCTCACTATTCTCTTCAGTAGGATGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTCTGCCTTCTTCATTATGCTCACTATTCTCTTCAGTAGGATGAC  889

seq1  TAACTGGAGTGATCACAGTACGCTCTAGAGAATGACCTCTGGAATTC  946
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAGTGATCACAGTACGCTCTAGAGAATGACCTCTGGAATTC  936