BAC Information

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BAC

Clone NameB6Ng01-218M02
Chromosome2 (Build37)
Map Location 128,560,616 - 128,561,675
singlet/doubletsinglet
Overlap geneMertk
Upstream geneNphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11, LOC100043424, LOC100043729, LOC383791, LOC100043730, Gm355, Anapc1
Downstream geneTmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik, Sirpa, Pdyn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218M02.bB6Ng01-218M02.g
ACCGA034800GA034801
length1361,067
definitionB6Ng01-218M02.b B6Ng01-218M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caggaatcttgggaaattgttacatttacttcggtattcactaattcttc
aatctcaatggcatctaatggtaattttaactttgggctcctatcttata
tagcagtttgctaaaatatggggtggggggtgggga
gaattccatagatctcaagatcctgagcaattgttctatatcccaaatgg
ccttgaaactaggtcctgcttctaccttgcctggtctctaagtattgtgc
agaatattcacctgactgcctaaaattgcaactgtgaaaacagagggccg
gtatcctcttgtctggtttggaattttttggtgtccgagttatcttttct
gttttagatttattctccctccaccccccaccccgtgtatgctcacatgt
atgctcacatgtatgctcacatgtgtacagatgccagaagaggctgctga
caccacggagctgggctttcaggtggttgtgggttacctagcatgagtgc
tgagaaccaaacttggtgctcttaaccagagcctgtccagccccacctaa
accgtcactctggaaggcaagcatcactgcctttacctcagacacctatt
ctgtgctcaggtggtggtgagttggggagggaggcacagactggggacat
gggactgtctccttttttcctttctgctgggatggtcaggccagcactag
tacatagaaatgtgtcttttgttattagttatcttagctttgctttgctt
atgttccagctggaacgcctggaaaatgtccaacccagctggcacaggcc
tgtgcctgtggtctcagccctctgaggcaggagggctgtgggtttgaggt
gagcatgatgaagtacactctgagatctcgtcacaaaacaaaaaagcaac
gttggctcctactgccttctttccacctctgcagtgtgtttacaatcagc
aagttatacaacatacataaaagctgcattggagacaggcaaaatggctc
agagggtagaagcgattgtctgtcaggcctggggccctgggttcaatccc
tgggactgagcaaggaaaccaagacaaaaatccagggacagggactgttg
aggcaaagcacagtcctgacagtttcatgaccatgaagaggaagtagaga
catgggctttcctttcatgagtgaaaactagcaagcctagccagtaaaaa
aaaaagttatggcaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128560616_128561675
seq2: B6Ng01-218M02.g_67_1133 (reverse)

seq1  GTTTCCCATAACTTTTTTTTTT-CTTGCTA-GCTTGCTTAGTTTTCAACT  48
      |||| ||||||||||||||||| || |||| |||||| |||||||| |||
seq2  GTTTGCCATAACTTTTTTTTTTACTGGCTAGGCTTGC-TAGTTTTC-ACT  48

seq1  C-TGAAA-GAAAGCCC-TGTCTCTACTTCCTC-TCATGGTCATGAAACTG  94
      | ||||| |||||||| ||||||||||||||| |||||||||||||||||
seq2  CATGAAAGGAAAGCCCATGTCTCTACTTCCTCTTCATGGTCATGAAACTG  98

seq1  TCAGGACTGTGCTTTGCCTC-ACAGTCCCTGTCCCT-GATTTTTGTCTTG  142
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  TCAGGACTGTGCTTTGCCTCAACAGTCCCTGTCCCTGGATTTTTGTCTTG  148

seq1  G-TTCCCTGCTCAGTCCCAGGGATTGAACCCAGGGCCCCAGGCCTGACAG  191
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTGCTCAGTCCCAGGGATTGAACCCAGGGCCCCAGGCCTGACAG  198

seq1  ACAATCGCTTCTACCCTCTGAGCCATTTTGCCTGTCTCCAATGCAGCTTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCGCTTCTACCCTCTGAGCCATTTTGCCTGTCTCCAATGCAGCTTT  248

seq1  TATGTATGTTGTATAACTTGCTGATTGTAAACACACTGCAGAGGTGGAAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTTGTATAACTTGCTGATTGTAAACACACTGCAGAGGTGGAAA  298

seq1  GAAGGCAGTAGGAGCCAACGTTGCTTTTTTGTTTTGTGACGAGATCTCAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGTAGGAGCCAACGTTGCTTTTTTGTTTTGTGACGAGATCTCAG  348

seq1  AGTGTACTTCATCATGCTCACCTCAAACCCACAGCCCTCCTGCCTCAGAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTCATCATGCTCACCTCAAACCCACAGCCCTCCTGCCTCAGAG  398

seq1  GGCTGAGACCACAGGCACAGGCCTGTGCCAGCTGGGTTGGACATTTTCCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGACCACAGGCACAGGCCTGTGCCAGCTGGGTTGGACATTTTCCA  448

seq1  GGCGTTCCAGCTGGAACATAAGCAAAGCAAAGCTAAGATAACTAATAACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTCCAGCTGGAACATAAGCAAAGCAAAGCTAAGATAACTAATAACA  498

seq1  AAAGACACATTTCTATGTACTAGTGCTGGCCTGACCATCCCAGCAGAAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACATTTCTATGTACTAGTGCTGGCCTGACCATCCCAGCAGAAAG  548

seq1  GAAAAAAGGAGACAGTCCCATGTCCCCAGTCTGTGCCTCCCTCCCCAACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGGAGACAGTCCCATGTCCCCAGTCTGTGCCTCCCTCCCCAACT  598

seq1  CACCACCACCTGAGCACAGAATAGGTGTCTGAGGTAAAGGCAGTGATGCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCTGAGCACAGAATAGGTGTCTGAGGTAAAGGCAGTGATGCT  648

seq1  TGCCTTCCAGAGTGACGGTTTAGGTGGGGCTGGACAGGCTCTGGTTAAGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCAGAGTGACGGTTTAGGTGGGGCTGGACAGGCTCTGGTTAAGA  698

seq1  GCACCAAGTTTGGTTCTCAGCACTCATGCTAGGTAACCCACAACCACCTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAGTTTGGTTCTCAGCACTCATGCTAGGTAACCCACAACCACCTG  748

seq1  AAAGCCCAGCTCCGTGGTGTCAGCAGCCTCTTCTGGCATCTGTACACATG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAGCTCCGTGGTGTCAGCAGCCTCTTCTGGCATCTGTACACATG  798

seq1  TGAGCATACATGTGAGCATACATGTGAGCATACACGGGGTGGGGGGTGGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATACATGTGAGCATACATGTGAGCATACACGGGGTGGGGGGTGGA  848

seq1  GGGAGAATAAATCTAAAACAGAAAAGATAACTCGGACACCAAAAAATTCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATAAATCTAAAACAGAAAAGATAACTCGGACACCAAAAAATTCC  898

seq1  AAACCAGACAAGAGGATACCGGCCCTCTGTTTTCACAGTTGCAATTTTAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGACAAGAGGATACCGGCCCTCTGTTTTCACAGTTGCAATTTTAG  948

seq1  GCAGTCAGGTGAATATTCTGCACAATACTTAGAGACCAGGCAAGGTAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGGTGAATATTCTGCACAATACTTAGAGACCAGGCAAGGTAGAA  998

seq1  GCAGGACCTAGTTTCAAGGCCATTTGGGATATAGAACAATTGCTCAGGAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACCTAGTTTCAAGGCCATTTGGGATATAGAACAATTGCTCAGGAT  1048

seq1  CTTGAGATCTATGGAATTC  1060
      |||||||||||||||||||
seq2  CTTGAGATCTATGGAATTC  1067