BAC Information

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BAC

Clone NameB6Ng01-221F06
Chromosome2 (Build37)
Map Location 142,415,112 - 142,494,519
singlet/doubletdoublet
Overlap geneKif16b
Upstream geneLOC668913, LOC668914
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221F06.bB6Ng01-221F06.g
ACCGA036651GA036652
length1,1311,032
definitionB6Ng01-221F06.b B6Ng01-221F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,415,112 - 142,416,237)(142,493,487 - 142,494,519)
sequence
gaattcagccttcagggctgagttctcaatcagtgataccactgggcttc
cagaaggacttgccagcccctaatctttgtctccctgtaaacaaacactt
gcccttttcaagtttcactgattcatcctccttccctaaggccaagggag
tccttggaatgacccagcctgggtccatgagagggtttattctctttgtg
cctggagtcctatcccagagcccccaggcagcagtttcctccttagggag
ccaaggacaccctcgggagcaatgaggcctgggcctggtttaattaacct
ttgttaacaatcagttccttgaaggagccaccctctgtgactaatcctct
atgttctgatggtgctttgctccaaagccaccttctctatacatctgctc
acaagaggggcatcttctctctgtgcctggcagcccctttggtcacacta
ctgcagggctccattgtctgggctgctgtcatcctggaattaatctgaaa
gtggtctctttgacaacagaggcagcaaatatcggattcaatttgctttc
acccaagatttcccaggagtcatggcgaatgagataatcgatggtgatta
tgaggcttggcctgcctcactgagcccgcgtgttaaaaggagggagagtt
tctgctccggtgctcgcccaagtcaggtgctaattccggcagatccatta
cctttctcagcgcctctaaaccatatgtgctgcaataatcatgctgggta
ggtaaggcgatcagtccttcccgcctaagcaaagaggattcattcttttt
gcttctctttcacattccacaacaacaacaacaacaaaaatgttctgagc
atctggtgcagaagtgagtaggctgttcgaacaatgatgccgaagagatt
taatttaactgggctaaacttccttgtctcagctgagagactagtcaatg
gcttagccactaatccaatcaaaagaaagcatttaattacttgtcgatgc
catcttaaccctgagaagactgtttttcagctttggcttatcattctaaa
agacctcggcatctaggaagaaaacgtcagagccaatgaactggaggagc
gggtagacatctctgaatgcctctctgcccc

gaattcaaaatatatggaatctgtaatacactcgctaagataatcttttg
acaccttaaaacttcagttttagttacagcctgtaatcttttggaacttt
gtctaaaattacatcctgttctttcacattcccttctggagtatgttctc
ttgggcacagactccaaaatagttggatgtgacagttccttttatggaga
ttttgatgaggttgtttcagtgcttctttttggtttcaaataatagatcc
taagtccgtgctttagagattgagaaaggtaaacgaaaccaaagtttgcc
tggttttggtagaggtgaggattgaggttcttccagccctgatttgaatg
aaatttttgaatgaaacttactatttagacaagactggcctcaaactcat
ggtcatctacttgactctgcctcccaagtactgggattaaaggtatgcat
cactatacatggtaaatatgaccagtcttctctgaaggttgtcttaatct
aagcctttcaggtatctgtttgcagtatctatctataactttaagctcaa
caggctcccatggactaccacagcatcaagccccagccttcgcacctctc
attgtccatcagggtagaaactccagaactctatagcaattggtgcagga
ggctgtctagtagctggccctttagccccacattttacaggtgaaggccc
ccacacttgagtgatgggtagataatgagtatctctggcctggctcccat
gctagagtggaatcattgtttctataggcaaacttcacaggcagaacttc
catagccactacaaaatacatggaggtggacttacctcatatggaggaga
aagcttgtgtcttcctcctgggttaactgtcactcctctagtccagaagt
aatcttactggataattgtcagtttttgcttggcaatatgcccattagtt
gacttagcatctttcagatttccagaattcaatagacaaatcccgggacc
tttttttttgttgccggggggagaaggggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142415112_142416237
seq2: B6Ng01-221F06.b_47_1177

seq1  GAATTCAGCCTTCAGGGCTGAGTTCTCAATCAGTGATACCACTGGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTTCAGGGCTGAGTTCTCAATCAGTGATACCACTGGGCTTC  50

seq1  CAGAAGGACTTGCCAGCCCCTAATCTTTGTCTCCCTGTAAACAAACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGACTTGCCAGCCCCTAATCTTTGTCTCCCTGTAAACAAACACTT  100

seq1  GCCCTTTTCAAGTTTCACTGATTCATCCTCCTTCCCTAAGGCCAAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTCAAGTTTCACTGATTCATCCTCCTTCCCTAAGGCCAAGGGAG  150

seq1  TCCTTGGAATGACCCAGCCTGGGTCCATGAGAGGGTTTATTCTCTTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAATGACCCAGCCTGGGTCCATGAGAGGGTTTATTCTCTTTGTG  200

seq1  CCTGGAGTCCTATCCCAGAGCCCCCAGGCAGCAGTTTCCTCCTTAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTCCTATCCCAGAGCCCCCAGGCAGCAGTTTCCTCCTTAGGGAG  250

seq1  CCAAGGACACCCTCGGGAGCAATGAGGCCTGGGCCTGGTTTAATTAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGACACCCTCGGGAGCAATGAGGCCTGGGCCTGGTTTAATTAACCT  300

seq1  TTGTTAACAATCAGTTCCTTGAAGGAGCCACCCTCTGTGACTAATCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACAATCAGTTCCTTGAAGGAGCCACCCTCTGTGACTAATCCTCT  350

seq1  ATGTTCTGATGGTGCTTTGCTCCAAAGCCACCTTCTCTATACATCTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGATGGTGCTTTGCTCCAAAGCCACCTTCTCTATACATCTGCTC  400

seq1  ACAAGAGGGGCATCTTCTCTCTGTGCCTGGCAGCCCCTTTGGTCACACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGGGCATCTTCTCTCTGTGCCTGGCAGCCCCTTTGGTCACACTA  450

seq1  CTGCAGGGCTCCATTGTCTGGGCTGCTGTCATCCTGGAATTAATCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGCTCCATTGTCTGGGCTGCTGTCATCCTGGAATTAATCTGAAA  500

seq1  GTGGTCTCTTTGACAACAGAGGCAGCAAATATCGGATTCAATTTGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCTTTGACAACAGAGGCAGCAAATATCGGATTCAATTTGCTTTC  550

seq1  ACCCAAGATTTCCCAGGAGTCATGGCGAATGAGATAATCGATGGTGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGATTTCCCAGGAGTCATGGCGAATGAGATAATCGATGGTGATTA  600

seq1  TGAGGCTTGGCCTGCCTCACTGAGCCCGCGTGTTAAAAGGAGGGAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTGGCCTGCCTCACTGAGCCCGCGTGTTAAAAGGAGGGAGAGTT  650

seq1  TCTGCTCCGGTGCTCGCCCAAGTCAGGTGCTAATTCCGGCAGATCCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCGGTGCTCGCCCAAGTCAGGTGCTAATTCCGGCAGATCCATTA  700

seq1  CCTTTCTCAGCGCCTCTAAACCATATGTGCTGCAATAATCATGCTGGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCAGCGCCTCTAAACCATATGTGCTGCAATAATCATGCTGGGTA  750

seq1  GGTAAGGCGATCAGTCC-TCCCGCCTAAGCAAAGAGGATTCATTCTTTTT  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGTAAGGCGATCAGTCCTTCCCGCCTAAGCAAAGAGGATTCATTCTTTTT  800

seq1  GCTTCTC-TTCACATTCCACAACAACAACAACAACAAAAATGTTCTGAGC  848
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTTTCACATTCCACAACAACAACAACAACAAAAATGTTCTGAGC  850

seq1  ATCTGGTGCAGAAGTGAGTAGGCTGTTCGAACCAATGATGCCGAAGAGAT  898
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTGGTGCAGAAGTGAGTAGGCTGTTCGAA-CAATGATGCCGAAGAGAT  899

seq1  TTAATTTAACTGGGCTAAACTTTCCTTGTCTCAGCTGGAGAGACTAGTCA  948
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  TTAATTTAACTGGGCTAAAC-TTCCTTGTCTCAGCT-GAGAGACTAGTCA  947

seq1  ATGGCTTAGCCACTAATCCAATCAAAAGAAAGCATTAAATTACTTGTCGA  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGGCTTAGCCACTAATCCAATCAAAAGAAAGCATTTAATTACTTGTCGA  997

seq1  TGCCATCTTAACCCTGAGAAGACTG-TTTTCAGC-TTGGCTGATCATTCT  1046
      ||||||||||||||||||||||||| |||||||| |||||| ||||||||
seq2  TGCCATCTTAACCCTGAGAAGACTGTTTTTCAGCTTTGGCTTATCATTCT  1047

seq1  AAAAGACCTCGGCATCCAGGGAAGAAACG-CAGAGCAAATG-ACT-GAGG  1093
      |||||||||||||||| ||| |  ||||| |||||| |||| ||| ||||
seq2  AAAAGACCTCGGCATCTAGGAAGAAAACGTCAGAGCCAATGAACTGGAGG  1097

seq1  AGCGGG-AGACATCTTCCAGATGCCTCTC-GCCCC  1126
      |||||| ||||||| ||   ||||||||| |||||
seq2  AGCGGGTAGACATC-TCTGAATGCCTCTCTGCCCC  1131


seq1: chr2_142493487_142494519
seq2: B6Ng01-221F06.g_65_1096 (reverse)

seq1  ACACCCC-TCTCCCCCC-GCCACAAAAAAAAAGGTCCGGGAATTTGTCTA  48
      ||||||| ||||||||| || |||||||||||||||| || |||||||||
seq2  ACACCCCTTCTCCCCCCGGCAACAAAAAAAAAGGTCCCGGGATTTGTCTA  50

seq1  ATGAATTCTGGAAATCTGAAAAGATGCTAAGTCAACTTAATGGGCAATAT  98
       ||||||||||||||||| ||||||||||||||||| |||||||| ||||
seq2  TTGAATTCTGGAAATCTG-AAAGATGCTAAGTCAAC-TAATGGGC-ATAT  97

seq1  TGCCCAAGCAAAAACTGACATTTATCCCAGTAAGA-TACTTCTGGACTAG  147
      || ||||||||||||||||| |||| ||||||||| ||||||||||||||
seq2  TG-CCAAGCAAAAACTGACAATTAT-CCAGTAAGATTACTTCTGGACTAG  145

seq1  AGGAGTGACAGTT-ACCCAGGAGGAAGACAC-AGCTTTCTCCTCCATATG  195
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  AGGAGTGACAGTTAACCCAGGAGGAAGACACAAGCTTTCTCCTCCATATG  195

seq1  AGGTAAGTCCACCTCCATGTATTTTGTAGTGGCTATGGAAGTTCTGCCTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGTCCACCTCCATGTATTTTGTAGTGGCTATGGAAGTTCTGCCTG  245

seq1  TGAAGTTTTGCCTATAGAAACAATGATTCCACTCTAGCATGGGAGCCAGG  295
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAG-TTTGCCTATAGAAACAATGATTCCACTCTAGCATGGGAGCCAGG  294

seq1  CCAGAGATACTCATTATCTACCCATCACTCAAGTGTGGGGGCCTTCACCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATACTCATTATCTACCCATCACTCAAGTGTGGGGGCCTTCACCT  344

seq1  GTAAAATGTGGGGCTAAAGGGCCAGCTACTAGACAGCCTCCTGCACCAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGTGGGGCTAAAGGGCCAGCTACTAGACAGCCTCCTGCACCAAT  394

seq1  TGCTATAGAGTTCTGGAGTTTCTACCCTGATGGACAATGAGAGGTGCGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATAGAGTTCTGGAGTTTCTACCCTGATGGACAATGAGAGGTGCGAA  444

seq1  GGCTGGGGCTTGATGCTGTGGTAGTCCATGGGAGCCTGTTGAGCTTAAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGCTTGATGCTGTGGTAGTCCATGGGAGCCTGTTGAGCTTAAAG  494

seq1  TTATAGATAGATACTGCAAACAGATACCTGAAAGGCTTAGATTAAGACAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATAGATACTGCAAACAGATACCTGAAAGGCTTAGATTAAGACAA  544

seq1  CCTTCAGAGAAGACTGGTCATATTTACCATGTATAGTGATGCATACCTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAGAAGACTGGTCATATTTACCATGTATAGTGATGCATACCTTT  594

seq1  AATCCCAGTACTTGGGAGGCAGAGTCAAGTAGATGACCATGAGTTTGAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGTACTTGGGAGGCAGAGTCAAGTAGATGACCATGAGTTTGAGG  644

seq1  CCAGTCTTGTCTAAATAGTAAGTTTCATTCAAAAATTTCATTCAAATCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTGTCTAAATAGTAAGTTTCATTCAAAAATTTCATTCAAATCAG  694

seq1  GGCTGGAAGAACCTCAATCCTCACCTCTACCAAAACCAGGCAAACTTTGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAAGAACCTCAATCCTCACCTCTACCAAAACCAGGCAAACTTTGG  744

seq1  TTTCGTTTACCTTTCTCAATCTCTAAAGCACGGACTTAGGATCTATTATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTACCTTTCTCAATCTCTAAAGCACGGACTTAGGATCTATTATT  794

seq1  TGAAACCAAAAAGAAGCACTGAAACAACCTCATCAAAATCTCCATAAAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCAAAAAGAAGCACTGAAACAACCTCATCAAAATCTCCATAAAAG  844

seq1  GAACTGTCACATCCAACTATTTTGGAGTCTGTGCCCAAGAGAACATACTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTCACATCCAACTATTTTGGAGTCTGTGCCCAAGAGAACATACTC  894

seq1  CAGAAGGGAATGTGAAAGAACAGGATGTAATTTTAGACAAAGTTCCAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGAATGTGAAAGAACAGGATGTAATTTTAGACAAAGTTCCAAAA  944

seq1  GATTACAGGCTGTAACTAAAACTGAAGTTTTAAGGTGTCAAAAGATTATC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGGCTGTAACTAAAACTGAAGTTTTAAGGTGTCAAAAGATTATC  994

seq1  TTAGCGAGTGTATTACAGATTCCATATATTTTGAATTC  1033
      ||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGAGTGTATTACAGATTCCATATATTTTGAATTC  1032


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