BAC Information

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BAC

Clone NameB6Ng01-221H06
Chromosome2 (Build37)
Map Location 82,742,887 - 82,743,739
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
Downstream geneLOC433440, Fsip2, LOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221H06.bB6Ng01-221H06.g
ACCGA036745GA036746
length1,161864
definitionB6Ng01-221H06.b B6Ng01-221H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatgcctgagaagcacctgaaaacatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagttaaaatggctaagatcaaaatttcagttgacagc
agatgctggcgaggatatggaaaaagaggaacactcctccattgttggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatcccgcagtacctctcctggtc
atatatccagaagatgttccaactgataagaaggacacttgctccactat
gttcatagcagccttatttataatagccagaaaatggaaagaatccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttagacaatg
aagtactactcagctattaaaaagaatgaatttatgaaattcctagccta
atggatggacctggaggtcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatagtatgtactcactgataagtggatattagcccagaaac
ttagaatacccaggatataagatacaatttgttaaacacgtgaaactcaa
gaacaaagaccaaagtgtggacactgtgccccttcttagaattcggaaca
aaacacccatgaaaggagttacagagacaaagtttggagctgagatgaaa
ggatggaccatccagagactgctgtattcggggatccatcacataatcag
cttccaaacgctgacaccattgcatacactagcaagattttgctcaaagg
acccagatatagctgtctcttgtgagcctatgccggggcctaacacacac
agaagtgaatgctcaaagtcagctattggatggatcacagggcccccaat
ggaggagctagggaaagtaaccaggagctaaagggatctgcaaccctata
gtggaacaacattacgaactaattcagtaccccttggagctcatgtctag
ctgcatatgtatccagagatggctagtagacctcatggaagagagccatt
gttgggcactttaatgccctcagttaggagtcaggccaagagtaggaact
gtttgctgcga
gaattcagggttatcccctactttctcttctatcaagttctgtgtatctg
gtatatgttgaagccattgatccttctgaagttgagttttgtgcaggatg
atgagttttggatctttggaatcttctgcatgcatccattcagtttcatt
aacactatttgttgaagatgctgtgtgaatcccattgtgtatttttggct
tctgtatcaaaaatcaggtgtccataggggcagggaagcttgggtttgtc
tgactttgcttccttgagaggcatgcatgcatcattgatttttttcctgt
tatagtccacggctcctggggcatgatgtgccttcctgttcttgagagac
ttatgtattctcccaggcagtgaaacattcagactgctttgtatttctct
gcatgtcccattactagtcaaggaatcatggaagcttgacaggacaattg
gccttagacattagtcttgtataccctgtataacttgcaaagatccttgt
atcctggcaatgacaactttattgatcatggcaattgccattctattttg
tttctgaaaaaggtatgaaaagtctgatttctctcaataaaattgttgca
gcctcaattatgttatgccctccctcaagctagcctgattaaattccctg
tggccataacaggttaccttggcccagtaagtatgggtgggtgcatccac
ttagctgtgtggattttatgtctgcatcttctgtgcagtgtttcattact
ataagcactatttgtataatctgagattagagatgagcagttctttttat
tattttaggattgtttttatcctatccctgcttttgttgttgttgtgtgt
gtattgtgtgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82742887_82743739
seq2: B6Ng01-221H06.g_65_928 (reverse)

seq1  --CACACACACACACACACACAACAACAAC-AAAGCA-GGATA-GAT-AA  44
        |||||||| | ||||||||||||||||| |||||| ||||| ||| ||
seq2  CTCACACACA-ATACACACACAACAACAACAAAAGCAGGGATAGGATAAA  49

seq1  AACAATCCT-AAATAAT-AAAAGAACTGCTCATCTCTAATCTCAGATTAT  92
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  AACAATCCTAAAATAATAAAAAGAACTGCTCATCTCTAATCTCAGATTAT  99

seq1  AC-AATAGTGC-TATAGTAATG-AACACTGCACAGAAGATGCAGACAT-A  138
      || |||||||| |||||||||| ||||||||||||||||||||||||| |
seq2  ACAAATAGTGCTTATAGTAATGAAACACTGCACAGAAGATGCAGACATAA  149

seq1  AATCCACACAGCTAAGTGGATGCACCCACCCATACTTACTGGGCCAAGGT  188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACACAGCTAAGTGGATGCACCCACCCATACTTACTGGGCCAAGGT  199

seq1  AACCTGTTATGGCCACAGGGAATTTAATCAGGCTAGCTTGAGGGAGGGCA  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTATGGCCACAGGGAATTTAATCAGGCTAGCTTGAGGGAGGGCA  249

seq1  TAACATAATTGAGGCTGCAACAATTTTATTGAGAGAAATCAGACTTTTCA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAATTGAGGCTGCAACAATTTTATTGAGAGAAATCAGACTTTTCA  299

seq1  TACCTTTTTCAGAAACAAAATAGAATGGCAATTGCCATGATCAATAAAGT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTTCAGAAACAAAATAGAATGGCAATTGCCATGATCAATAAAGT  349

seq1  TGTCATTGCCAGGATACAAGGATCTTTGCAAGTTATACAGGGTATACAAG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGCCAGGATACAAGGATCTTTGCAAGTTATACAGGGTATACAAG  399

seq1  ACTAATGTCTAAGGCCAATTGTCCTGTCAAGCTTCCATGATTCCTTGACT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGTCTAAGGCCAATTGTCCTGTCAAGCTTCCATGATTCCTTGACT  449

seq1  AGTAATGGGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCACTGCC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGGACATGCAGAGAAATACAAAGCAGTCTGAATGTTTCACTGCC  499

seq1  TGGGAGAATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCCCCAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAATACATAAGTCTCTCAAGAACAGGAAGGCACATCATGCCCCAG  549

seq1  GAGCCGTGGACTATAACAGGAAAAAAATCAATGATGCATGCATGCCTCTC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGTGGACTATAACAGGAAAAAAATCAATGATGCATGCATGCCTCTC  599

seq1  AAGGAAGCAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGACACCT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCAAAGTCAGACAAACCCAAGCTTCCCTGCCCCTATGGACACCT  649

seq1  GATTTTTGATACAGAAGCCAAAAATACACAATGGGATTCACACAGCATCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGATACAGAAGCCAAAAATACACAATGGGATTCACACAGCATCT  699

seq1  TCAACAAATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATTCCAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAATAGTGTTAATGAAACTGAATGGATGCATGCAGAAGATTCCAA  749

seq1  AGATCCAAAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGATCAAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAAAACTCATCATCCTGCACAAAACTCAACTTCAGAAGGATCAAT  799

seq1  GGCTTCAACATATACCAGATACACAGAACTTGATAGAAGAGAAAGTAGGG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAACATATACCAGATACACAGAACTTGATAGAAGAGAAAGTAGGG  849

seq1  GATAACCCTGAATTC  853
      |||||||||||||||
seq2  GATAACCCTGAATTC  864