BAC Information

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BAC

Clone NameB6Ng01-223N02
Chromosome2 (Build37)
Map Location 111,752,112 - 111,753,235
singlet/doubletsinglet
Overlap geneOlfr1306
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305
Downstream geneLOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223N02.bB6Ng01-223N02.g
ACCGA038455GA038456
length1,1871,128
definitionB6Ng01-223N02.b B6Ng01-223N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccatcttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttgcagaactttggagtttcat
taggtcccatttgtcaattctcgatcttagagcacaagccattgctgttc
tgttcaggaacttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttaagtgaagttccttgat
ccacttagatttgtccttagtacaaggagataagtatggatcgattcgat
ttgcattcttcatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctatctttcttccaatggatggttttagctcccttgtctaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttatcacacttg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatattgatcctgccaatccatgagcatgtgagatcctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagttttttatc
atacagatctttcacttcccttagttagagtcacaccgagatattttata
ttatttgtgactattgagatgggtgctgttccctaatttctttctcagcc
tgtttattcttcgtgtaagaggaaaggccattgacttgttgagtaagttt
attattcagcttacttcaccgaagcctggttaatcaaggatcaggactcc
tctggtagaagttttagggtcacttattattactatcaattcagccttgc
taaaagtgagattatttgcaccctcctccttttatca
gaattctatattacagaagacagttcatagtacatttaggaagttttcct
atagctaactagctgtctgcatactctcttcattgctaccttcatttctt
gatttctaaatgtatagattataggattcagaaacggagtgataactgca
tcaaatatggccagaaacttatcaagatgtgttgaaggagatggccaggt
atagaaaaatatcaaaggaccaaagaataagaacaccacagagatgtgag
cagaaagagtagatagggctttagaggaaccacttgaagaatgtttttgc
acagtgattatgatgacaatatatgaaatgatcagtatgaagaaggagcc
cacagaaatgaacccactgttggctgtgaccatgaattccagctggtaag
tatttatgcaggctagtttgataaaccgaggaaggtcacagtagaagctg
tccaacacatttggtccacagaatggtaagtttactaaaaaagccagttg
aatcaaagaatgcataaggccaaccacccaggcagccactgaaaacaaga
tgcacatcctcgggctcataatggtcaggtaatggagaggcttacatatg
gccacatatctgtcaaaggccatggctatgagcagcaccatctccacacc
accaatgacatgaatgaaaaatatttgagtaacacaacctgtaaaggaga
tgactttgtgctttctgaataagtcataaatcatctttggagaagtaaca
gaagaaacacccaagtcaatgaaagagaggttagccaaaagaaagtacat
gggagagtgtaagtgagggtcagatgccacagtgaacacgatgaggctgt
ttcccatcatgcttgccacataaaacgtgggaggagaacacaaagagaaa
tagttgaatactccagggagttggtgagtcccaggaacacaaactctgac
accacagaactgattcacttcttttccattggttgtgttggcagtgctgc
ctgaaggaggaggaggagaaactataattatattatttaaatcctacaat
atatattaaaatagtgctgagcactagtagtatcagaaggatcatacttt
caacttggcagtgaattcacctcacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111752112_111753235
seq2: B6Ng01-223N02.g_64_1191

seq1  GAATTCTATATTACAGAAGACAGTTCATAGTACATTTAGGAAGTTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATTACAGAAGACAGTTCATAGTACATTTAGGAAGTTTTCCT  50

seq1  ATAGCTAACTAGCTGTCTGCATACTCTCTTCATTGCTACCTTCATTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAACTAGCTGTCTGCATACTCTCTTCATTGCTACCTTCATTTCTT  100

seq1  GATTTCTAAATGTATAGATTATAGGATTCAGAAACGGAGTGATAACTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTAAATGTATAGATTATAGGATTCAGAAACGGAGTGATAACTGCA  150

seq1  TCAAATATGGCCAGAAACTTATCAAGATGTGTTGAAGGAGATGGCCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATGGCCAGAAACTTATCAAGATGTGTTGAAGGAGATGGCCAGGT  200

seq1  ATAGAAAAATATCAAAGGACCAAAGAATAAGAACACCACAGAGATGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAATATCAAAGGACCAAAGAATAAGAACACCACAGAGATGTGAG  250

seq1  CAGAAAGAGTAGATAGGGCTTTAGAGGAACCACTTGAAGAATGTTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGTAGATAGGGCTTTAGAGGAACCACTTGAAGAATGTTTTTGC  300

seq1  ACAGTGATTATGATGACAATATATGAAATGATCAGTATGAAGAAGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATTATGATGACAATATATGAAATGATCAGTATGAAGAAGGAGCC  350

seq1  CACAGAAATGAACCCACTGTTGGCTGTGACCATGAATTCCAGCTGGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAATGAACCCACTGTTGGCTGTGACCATGAATTCCAGCTGGTAAG  400

seq1  TATTTATGCAGGCTAGTTTGATAAACCGAGGAAGGTCACAGTAGAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGCAGGCTAGTTTGATAAACCGAGGAAGGTCACAGTAGAAGCTG  450

seq1  TCCAACACATTTGGTCCACAGAATGGTAAGTTTACTAAAAAAGCCAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACATTTGGTCCACAGAATGGTAAGTTTACTAAAAAAGCCAGTTG  500

seq1  AATCAAAGAATGCATAAGGCCAACCACCCAGGCAGCCACTGAAAACAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGAATGCATAAGGCCAACCACCCAGGCAGCCACTGAAAACAAGA  550

seq1  TGCACATCCTCGGGCTCATAATGGTCAGGTAATGGAGAGGCTTACATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATCCTCGGGCTCATAATGGTCAGGTAATGGAGAGGCTTACATATG  600

seq1  GCCACATATCTGTCAAAGGCCATGGCTATGAGCAGCACCATCTCCACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATATCTGTCAAAGGCCATGGCTATGAGCAGCACCATCTCCACACC  650

seq1  ACCAATGACATGAATGAAAAATATTTGAGTAACACAACCTGTAAAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGACATGAATGAAAAATATTTGAGTAACACAACCTGTAAAGGAGA  700

seq1  TGACTTTGTGCTTTCTGAATAAGTCATAAATCATCTTTGGAGAAGTAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGTGCTTTCTGAATAAGTCATAAATCATCTTTGGAGAAGTAACA  750

seq1  GAAGAAACACCCAAGTCAATGAAAGAGAGGTTAGCCAAAAGAAAGTACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACACCCAAGTCAATGAAAGAGAGGTTAGCCAAAAGAAAGTACAT  800

seq1  GGGAGAGTGTAAGTGAGGGTCAGATGCCACAGTGAACACGATGAGGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGTGTAAGTGAGGGTCAGATGCCACAGTGAACACGATGAGGCTGT  850

seq1  TTCCCATCATGCTTGCCACATAAAACGT-GGAGGAGAACACAAAGAGAAA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCCCATCATGCTTGCCACATAAAACGTGGGAGGAGAACACAAAGAGAAA  900

seq1  TAGTTGAATACTCCA-GGAGTTGGTGAGTCCCAGGAACACAAACTCTGAC  948
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAGTTGAATACTCCAGGGAGTTGGTGAGTCCCAGGAACACAAACTCTGAC  950

seq1  ACCACAG-ACTGATTCACT--CTTTCCATTGGTTGTGTTGGCAGTGCTGC  995
      ||||||| |||||||||||   ||||||||||||||||||||||||||||
seq2  ACCACAGAACTGATTCACTTCTTTTCCATTGGTTGTGTTGGCAGTGCTGC  1000

seq1  CTGAAGGAGGAAGGAGGAGAAACTATAAATTATATTAATTTTAAATCCTA  1045
      |||||||||| ||||||||||||||| ||||||||||  |||||||||||
seq2  CTGAAGGAGG-AGGAGGAGAAACTAT-AATTATATTA--TTTAAATCCTA  1046

seq1  C-ATATATA-TAAATAAGTGCTGAGCACTAGTAGTAATCAG-AGGATCAT  1092
      | ||||||| ||||  ||||||||||||||||||| ||||| ||||||||
seq2  CAATATATATTAAAATAGTGCTGAGCACTAGTAGT-ATCAGAAGGATCAT  1095

seq1  AACTTCAAACT-GCAGTGAAATCACCTCACATT  1124
      |  |||||  | |||||||| ||||||||||| 
seq2  ACTTTCAACTTGGCAGTGAATTCACCTCACATC  1128