BAC Information

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BAC

Clone NameB6Ng01-225P12
Chromosome2 (Build37)
Map Location 115,685,586 - 115,841,584
singlet/doubletdoublet
Overlap geneMrg1
Upstream geneLOC100043222, LOC100043232, LOC100043236, BC052040
Downstream geneG630016G05Rik, 2810405F15Rik, LOC433464, Tmco5, LOC100043557
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225P12.bB6Ng01-225P12.g
ACCGA040029GA040030
length8691,080
definitionB6Ng01-225P12.b B6Ng01-225P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,840,717 - 115,841,584)(115,685,586 - 115,686,669)
sequence
gaattcttcactcaaatggtgtcgagtcagctggtttttaatttgttatc
ttctcaagagtacattcaccggctttatcactaagaagaatgactcccta
gtctgtgtgatcaagatccggaaacgtgctggctcagcacgggaaggctg
aaccgccacttgattggtggcccttggatcagtctgatcttgctgcagag
atgtctgacttctcataggctgatttccacaggtgtgtgagtagacctac
tgagagagcaaaggctttctttccttcctgggaagtggttgaacaagctt
tcctctcacactgctagtgaccggtgctatctttctttaaggctcactat
gggcatataacacagtaatccaaaaacccaattctggcctttgtgccctt
agatataagaatggggcaaggttttgggttgtttatttttttcttaagtg
aaggcatttttctgccaattgtactaatttttcttcccatgaaagggacc
ttaaaacaaaacagaagaggcccaacctaactttcatttgatgacactag
gtaaatattatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatacaaatatacattgatgcatgtgcacgtcagcg
tgcctcagtataccactgcactgtctaggctaacgccatgaggcacatta
ctctctctacacgttacttttttccaattattaattatatttttaaaggg
gaggagacgccctaggtcacatgattgcacaggcaggcggactgaagtga
gtaacccagagctcgagtgacttcagagaaatatctatagacaaagagac
tgatctgtctgagggtgga
gaattctcacgcgcagcccccctcccctgcgttcaaaacacctcaaacac
acaacaaacaaaaccaaataccacaaaggcagagactgggcgacacctcc
cctctggcgctcctgtgttatttcctgagtgaccccttcttttctcttca
cctcctaacccagagcctctgattatgagataatggattttgtgattgtt
cctgtcagggggaaaaaaattcccccaccgaaccccgcgtttttatcttt
ccactgttttatttaagccaatgggaaagtattgagaacggtaattgatt
cataatgatccataaatcggtgtcggaaagtgggggtagggcggtggtgc
gaagagaagggggcgatgctgtttatttattttatttctaaagcctcagc
taaagtagctttgacactgttggggctggaggggaggggccgctgggctc
tgccggatcatccatcattcctgtcacccagagtctgcccggaggagcag
tagacgcaatctcccttctgtctctacagcgaaactattaatattaaaac
ctcccttcaaacactgccccgacggtccccattctcatcacgatttgacc
gcagagtccagcgctgcacctttctccagccccgctgggactgcgggggg
gctccccacgcgcacgacgcccgaagttgatcactgaaaaaaaaaaaaac
aaaaacaaaaacaaaaaaaccaccacggttgcttgtccccctccatccgt
ttgcagcaggttcgtccatacaacaaacacactcgcgacggggaggccgt
ctgcacgcacgaccacaggcatgatcctcctttgttcttggcttgtgcca
caactcccctgtccctggaccacagggtgaccgcttagttcgggccactc
ggccatttaacagctcgaagaggaccttctggcaaagtgggagacttgta
ccagaggtccagtttctttatcaattgctggcttgcaagactatggagaa
tttgcggagatcctttggaaggaggaccctctcttttgacgctgctagaa
gatatagccacattttccttcccgtatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115840717_115841584
seq2: B6Ng01-225P12.b_47_915 (reverse)

seq1  TCCACCCTCAGACAG-TCAGTCTGATATGGCATAAGAAATCTTCAC-GTA  48
      ||||||||||||||| |||||||  | || |   ||| || ||| | | |
seq2  TCCACCCTCAGACAGATCAGTCT-CTTTGTCTATAGATAT-TTCTCTGAA  48

seq1  GACACTCGAGGCACGGGTAGCACAGTT-AGATCTCCAGCCTGTGCTGTCA  97
      | ||||||||    ||||  | || || ||  | || ||||||||  |||
seq2  GTCACTCGAGCTCTGGGTTACTCACTTCAGTCCGCCTGCCTGTGCAATCA  98

seq1  TGTGCCACATGGCCTCTCCTCCCTTTCAAAAATATAATTAATACTTTGGA  147
      |||| |  | ||| ||||||||| || |||||||||||||||| || | |
seq2  TGTGACCTAGGGCGTCTCCTCCCCTTTAAAAATATAATTAATAATTGGAA  148

seq1  AAAAGTAACGTGTAGAGAGAGTAATGTGCCTCATGGCTTTAGCCTGGGCA  197
      ||||||||||||||||||||||||||||||||||||| ||||||| | ||
seq2  AAAAGTAACGTGTAGAGAGAGTAATGTGCCTCATGGCGTTAGCCTAGACA  198

seq1  GTGCAGTGGTATACTGATGCCAGATGATGTGCAAATGCCTCATTGTGACT  247
      ||||||||||||||||| ||  | ||| ||||| |||| ||| |||   |
seq2  GTGCAGTGGTATACTGAGGCACGCTGACGTGCACATGCATCAATGTATAT  248

seq1  TTTGAGATATATATATATATATATATATATATATATATATATATATATAT  297
      ||  | ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATATATATATATATATATATATATATATATATATATATATATAT  298

seq1  ATATATATATATAATATTTACCTAGTGTCATCAAATGAAAGTTAGGTTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATAATATTTACCTAGTGTCATCAAATGAAAGTTAGGTTGG  348

seq1  GCCTCTTCTGTTTTGTTTTAAGGTCCCTTTCATGGGAAGAAAAATTAGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCTGTTTTGTTTTAAGGTCCCTTTCATGGGAAGAAAAATTAGTA  398

seq1  CAATTGGCAGAAAAATGCCTTCACTTAAGAAAAAAATAAACAACCCAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGCAGAAAAATGCCTTCACTTAAGAAAAAAATAAACAACCCAAAA  448

seq1  CCTTGCCCCATTCTTATATCTAAGGGCACAAAGGCCAGAATTGGGTTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCCCATTCTTATATCTAAGGGCACAAAGGCCAGAATTGGGTTTTT  498

seq1  GGATTACTGTGTTATATGCCCATAGTGAGCCTTAAAGAAAGATAGCACCG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACTGTGTTATATGCCCATAGTGAGCCTTAAAGAAAGATAGCACCG  548

seq1  GTCACTAGCAGTGTGAGAGGAAAGCTTGTTCAACCACTTCCCAGGAAGGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAGCAGTGTGAGAGGAAAGCTTGTTCAACCACTTCCCAGGAAGGA  598

seq1  AAGAAAGCCTTTGCTCTCTCAGTAGGTCTACTCACACACCTGTGGAAATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCCTTTGCTCTCTCAGTAGGTCTACTCACACACCTGTGGAAATC  648

seq1  AGCCTATGAGAAGTCAGACATCTCTGCAGCAAGATCAGACTGATCCAAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATGAGAAGTCAGACATCTCTGCAGCAAGATCAGACTGATCCAAGG  698

seq1  GCCACCAATCAAGTGGCGGTTCAGCCTTCCCGTGCTGAGCCAGCACGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAATCAAGTGGCGGTTCAGCCTTCCCGTGCTGAGCCAGCACGTTT  748

seq1  CCGGATCTTGATCACACAGACTAGGGAGTCATTCTTCTTAGTGATAAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATCTTGATCACACAGACTAGGGAGTCATTCTTCTTAGTGATAAAGC  798

seq1  CGGTGAATGTACTCTTGAGAAGATAACAAATTAAAAACCAGCTGACTCGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAATGTACTCTTGAGAAGATAACAAATTAAAAACCAGCTGACTCGA  848

seq1  CACCATTTGAGTGAAGAATTC  868
      |||||||||||||||||||||
seq2  CACCATTTGAGTGAAGAATTC  869

seq1: chr2_115685586_115686669
seq2: B6Ng01-225P12.g_67_1146

seq1  GAATTCTCACGCGCAGCCCCCCTCCCCTGCGTTCAAAACACCTCAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACGCGCAGCCCCCCTCCCCTGCGTTCAAAACACCTCAAACAC  50

seq1  ACAACAAACAAAACCAAATACCACAAAGGCAGAGACTGGGCGACACCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAACAAAACCAAATACCACAAAGGCAGAGACTGGGCGACACCTCC  100

seq1  CCTCTGGCGCTCCTGTGTTATTTCCTGAGTGACCCCTTCTTTTCTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGCGCTCCTGTGTTATTTCCTGAGTGACCCCTTCTTTTCTCTTCA  150

seq1  CCTCCTAACCCAGAGCCTCTGATTATGAGATAATGGATTTTGTGATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAACCCAGAGCCTCTGATTATGAGATAATGGATTTTGTGATTGTT  200

seq1  CCTGTCAGGGGGAAAAAAATTCCCCCACCGAACCCCGCGTTTTTATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGGGGGAAAAAAATTCCCCCACCGAACCCCGCGTTTTTATCTTT  250

seq1  CCACTGTTTTATTTAAGCCAATGGGAAAGTATTGAGAACGGTAATTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTTTATTTAAGCCAATGGGAAAGTATTGAGAACGGTAATTGATT  300

seq1  CATAATGATCCATAAATCGGTGTCGGAAAGTGGGGGTAGGGCGGTGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGATCCATAAATCGGTGTCGGAAAGTGGGGGTAGGGCGGTGGTGC  350

seq1  GAAGAGAAGGGGGCGATGCTGTTTATTTATTTTATTTCTAAAGCCTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAGGGGGCGATGCTGTTTATTTATTTTATTTCTAAAGCCTCAGC  400

seq1  TAAAGTAGCTTTGACACTGTTGGGGCTGGAGGGGAGGGGCCGCTGGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGCTTTGACACTGTTGGGGCTGGAGGGGAGGGGCCGCTGGGCTC  450

seq1  TGCCGGATCATCCATCATTCCTGTCACCCAGAGTCTGCCCGGAGGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGGATCATCCATCATTCCTGTCACCCAGAGTCTGCCCGGAGGAGCAG  500

seq1  TAGACGCAATCTCCCTTCTGTCTCTACAGCGAAACTATTAATATTAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGCAATCTCCCTTCTGTCTCTACAGCGAAACTATTAATATTAAAAC  550

seq1  CTCCCTTCAAACACTGCCCCGACGGTCCCCATTCTCATCACGATTTGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCAAACACTGCCCCGACGGTCCCCATTCTCATCACGATTTGACC  600

seq1  GCAGAGTCCAGCGCTGCACCTTTCTCCAGCCCCGCTGGGACTGCGGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTCCAGCGCTGCACCTTTCTCCAGCCCCGCTGGGACTGCGGGGGG  650

seq1  GCTCCCCACGCGCACGACGCCCGAAGTTGATCACTGAAAAAAAAAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCACGCGCACGACGCCCGAAGTTGATCACTGAAAAAAAAAAAAAC  700

seq1  AAAAACAAAAACAAAAAAACCACCACGGTTGCTTGTCCCCCTCCATCCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAAACAAAAAAACCACCACGGTTGCTTGTCCCCCTCCATCCGT  750

seq1  TTGCAGCAGGTTCGTCCATACAACAAACACACTCGCGACGGGGAGGCCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCAGGTTCGTCCATACAACAAACACACTCGCGACGGGGAGGCCGT  800

seq1  CTGCACGCACGACCACAGGCATGATCCTCC-TTGTTCTTGGCTTGTGCCA  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGCACGCACGACCACAGGCATGATCCTCCTTTGTTCTTGGCTTGTGCCA  850

seq1  CAACTCCCCTGTCCCTGGACCACAGGGTGACCGCTTAGTTCGGGCCACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCCCTGTCCCTGGACCACAGGGTGACCGCTTAGTTCGGGCCACTC  900

seq1  GGCCATTTAAACAGCTCGAAAGAGGACCTTCTGGCAAAGT-GGAGACTTG  948
      |||||||| ||||||||| ||||||||||||||||||||| |||||||||
seq2  GGCCATTT-AACAGCTCG-AAGAGGACCTTCTGGCAAAGTGGGAGACTTG  948

seq1  TAGCAGAGGTCCAGGTTCCTTATCAAATTGCTGGCCTGCAAGACTAATGG  998
      || ||||||||||| ||| ||||| |||||||||| ||||||||| ||||
seq2  TACCAGAGGTCCAGTTTCTTTATC-AATTGCTGGCTTGCAAGACT-ATGG  996

seq1  AGAATTTGCGGAGGATCCCTTTGAAGGAAGGACCCTC-CTTTTGACAGCT  1047
      |||||||||||| ||||| || ||||| ||||||||| |||||||| |||
seq2  AGAATTTGCGGA-GATCCTTTGGAAGG-AGGACCCTCTCTTTTGAC-GCT  1043

seq1  GCTAG-AGATATTAGCCACATTTCCCTTCCCGGATCTG  1084
      ||||| ||||| ||||||||||| |||||||| |||||
seq2  GCTAGAAGATA-TAGCCACATTTTCCTTCCCGTATCTG  1080