BAC Information

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BAC

Clone NameB6Ng01-226O03
Chromosome2 (Build37)
Map Location 125,847,078 - 125,988,541
singlet/doubletdoublet
Overlap geneFgf7, Dtwd1
Upstream geneSlc24a5, Myef2, LOC100043375, Slc12a1, Dut, A530010F05Rik, LOC100043698, Fbn1, Cep152, Shc4, Eid1, 3110001I20Rik, Cops2, Galk2
Downstream geneAtp8b4, Slc27a2, Hdc, Gabpb1, Usp8, LOC100043714, Usp50, Trpm7, 2010106G01Rik, Ap4e1, Blvra, Ncaph, 1700041B20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226O03.bB6Ng01-226O03.g
ACCGA040696GA040697
length1,0251,106
definitionB6Ng01-226O03.b B6Ng01-226O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,847,078 - 125,847,706)(125,987,430 - 125,988,541)
sequence
gaattcttttctgctttgattcctcatgtagaaaatgaagacaaatgggt
agccataatgttttttctatctatctatctatctatctatctatccatcc
atcatctatatttctttctcatttcctgaatattttttaaacttttttct
ttttatttatttatttatttattttttattaggtattttcttcatttaca
tttccaatgctatccaaaaagtcccccataccctccccccaaccccctac
ccacccactcccactttttggccctggcgttctcctgtactggggcatat
aaagtttgcaagtccaatgggcctctctttccagtgatggctggctaggc
catctttcgatacatatgtagctagagtcaagagctccggggtactggtt
agttcataatgttattccacctatagggttgcagatccccttagctcctt
gggtattttctctagctcctccattgggggccctgtgatccatccaatag
ctgactgtgagcatccacttatgtgtttgctaggccctggcgtagtctca
ctagagacagctatatctgggtcctttcagcaaaatcttgctagtgtatg
caatggtgtcagcgtttggaggctgattatgggatggatccctggatatg
gcagtctctagatggtccatccttttgtctcagctccaaactttgtctct
gtaactccttccatgggtgttttgttcccaattctaagaaggggaaagtg
tccacactttagtcttcattcttcttgagtttcatgtgttttgcaaattg
taacttatatcttgggtattctaagtttttgggctaatatccacttatca
gtgagtacatatcatttgagttcttttgtgattgggttacctcactcaga
tgatgccctccaggtccaaccatttgcctaggaatttcataaattcattc
ttttaatagctgagtagtactccattgtgtaaatgtaccacatttttttt
gtatccattcctctgttgaggggca
gaattctatatggctgtaagtagatactaaaattttgaaaattgcagaaa
aatacatgaaattggagaacactgtatgaagtaaggtcaccagactgaga
aagagtcccccaattattcctgaggaggcagaggaagcaggaacttaatt
aggacctgtagggatttgcttttcatggttataaactagcacagaagtga
aatgcatgcttttgatgagaaatggaaaggagtaacaaatcttttgtaca
aatttcattttaggcaaacctaaacaagctgactttgaatagtagcagaa
taattctatttataggtttttcaaggacttttacttgtgttctttcattt
gaacctagtgattaccatataaggtagtaataagaaaaatatccgagaca
aatcttcaaacttttgaggagtgacttgctgcactaaggggaccgagggg
ctgtggcaactatgatttcttgttcatccaaagcacagggcagcatggat
catcatgtaaaccgcagccatgaagtcttcaaagtcttaccgcccactgg
tacaaactattccattagctaacaagttagctaagtcagtgtgatgtact
ctgtacttcctttaacttggaattgattaacagactgtagtatgcctttt
cttgagggaccttttggcaaccatgcaataccaactgagtagttctcttg
ccttctgatcatgaggctgttcaattactgggaaaatcttaaaagctttt
ggagaaaccagagaatgcttgaagcactgaggaaggtacaaagaaacaat
agaaacaacatgagcccctagactgcatactacagctgtgttcacaggca
agtaaaggaacttaagctgttattgggagctcagcatatcattcagcaga
aacggcatgcagggcccggagacagcccagtgagcagcgcacttgttgca
caacagcctgacgacctgagtcaatcccagaattccatggaaaggcacag
gaagaagcacagctacatgcgaccctttggtgagatggaggtggtgactg
agatactcaaaagctggtgagttggctcgtctgtgtagtgagcagagctt
cttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_125847078_125847706
seq2: B6Ng01-226O03.b_47_675

seq1  GAATTCTTTTCTGCTTTGATTCCTCATGTAGAAAATGAAGACAAATGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTGCTTTGATTCCTCATGTAGAAAATGAAGACAAATGGGT  50

seq1  AGCCATAATGTTTTTTCTATCTATCTATCTATCTATCTATCTATCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAATGTTTTTTCTATCTATCTATCTATCTATCTATCTATCCATCC  100

seq1  ATCATCTATATTTCTTTCTCATTTCCTGAATATTTTTTAAACTTTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTATATTTCTTTCTCATTTCCTGAATATTTTTTAAACTTTTTTCT  150

seq1  TTTTATTTATTTATTTATTTATTTTTTATTAGGTATTTTCTTCATTTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTATTTATTTATTTATTTTTTATTAGGTATTTTCTTCATTTACA  200

seq1  TTTCCAATGCTATCCAAAAAGTCCCCCATACCCTCCCCCCAACCCCCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATGCTATCCAAAAAGTCCCCCATACCCTCCCCCCAACCCCCTAC  250

seq1  CCACCCACTCCCACTTTTTGGCCCTGGCGTTCTCCTGTACTGGGGCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCCACTTTTTGGCCCTGGCGTTCTCCTGTACTGGGGCATAT  300

seq1  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCTGGCTAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCTGGCTAGGC  350

seq1  CATCTTTCGATACATATGTAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCGATACATATGTAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  400

seq1  AGTTCATAATGTTATTCCACCTATAGGGTTGCAGATCCCCTTAGCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAATGTTATTCCACCTATAGGGTTGCAGATCCCCTTAGCTCCTT  450

seq1  GGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  500

seq1  CTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCTGGCGTAGTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCTGGCGTAGTCTCA  550

seq1  CTAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATG  600

seq1  CAATGGTGTCAGCGTTTGGAGGCTGATTA  629
      |||||||||||||||||||||||||||||
seq2  CAATGGTGTCAGCGTTTGGAGGCTGATTA  629

seq1: chr2_125987430_125988541
seq2: B6Ng01-226O03.g_69_1174 (reverse)

seq1  AAAAAGAGCCTCTTGCTCACTACACCAGACGAGCCAACTCA-CAGCTTTT  49
      |||||||  ||| ||||||||||| |||||||||||||||| ||||||||
seq2  AAAAAGAAGCTC-TGCTCACTACA-CAGACGAGCCAACTCACCAGCTTTT  48

seq1  GAGTATCCTCCAGTCACCACCTCCATCTCACCAAAGGGGTCGGCATTGTA  99
      |||||||   ||||||||||||||||||||||||| ||||| ||| ||||
seq2  GAGTATC--TCAGTCACCACCTCCATCTCACCAAA-GGGTC-GCA-TGTA  93

seq1  GCTGTGCTTCTTCCTGTGCCTTTCCATGG-ATTCTGGGATTGACTCAGGT  148
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTGTGCTTCTTCCTGTGCCTTTCCATGGAATTCTGGGATTGACTCAGGT  143

seq1  CGTCAGGCTGTTGTGCAACAAGTGCGCTGCTCACTGGGCTGTCTCCGGGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGGCTGTTGTGCAACAAGTGCGCTGCTCACTGGGCTGTCTCCGGGC  193

seq1  CCTGCATGCCGTTTCTGCCTGAATGATATGCTGAGCTCCCAATAACAGCT  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTGCATGCCGTTTCTG-CTGAATGATATGCTGAGCTCCCAATAACAGCT  242

seq1  TAAGTTCCTTTACTTGCCTGTGAACACAGCTGTAGTATGCAGTCTAGGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTTTACTTGCCTGTGAACACAGCTGTAGTATGCAGTCTAGGGG  292

seq1  CTCATGTTGTTTCTATTGTTTCTTTGTACCTTCCTCAGTGCTTCAAGCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTGTTTCTATTGTTTCTTTGTACCTTCCTCAGTGCTTCAAGCAT  342

seq1  TCTCTGGTTTCTCCAAAAGCTTTTAAGATTTTCCCAGTAATTGAACAGCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTTTCTCCAAAAGCTTTTAAGATTTTCCCAGTAATTGAACAGCC  392

seq1  TCATGATCAGAAGGCAAGAGAACTACTCAGTTGGTATTGCATGGTTGCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCAGAAGGCAAGAGAACTACTCAGTTGGTATTGCATGGTTGCCA  442

seq1  AAAGGTCCCTCAAGAAAAGGCATACTACAGTCTGTTAATCAATTCCAAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCCCTCAAGAAAAGGCATACTACAGTCTGTTAATCAATTCCAAGT  492

seq1  TAAAGGAAGTACAGAGTACATCACACTGACTTAGCTAACTTGTTAGCTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAGTACAGAGTACATCACACTGACTTAGCTAACTTGTTAGCTAA  542

seq1  TGGAATAGTTTGTACCAGTGGGCGGTAAGACTTTGAAGACTTCATGGCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGTTTGTACCAGTGGGCGGTAAGACTTTGAAGACTTCATGGCTG  592

seq1  CGGTTTACATGATGATCCATGCTGCCCTGTGCTTTGGATGAACAAGAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTACATGATGATCCATGCTGCCCTGTGCTTTGGATGAACAAGAAAT  642

seq1  CATAGTTGCCACAGCCCCTCGGTCCCCTTAGTGCAGCAAGTCACTCCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTGCCACAGCCCCTCGGTCCCCTTAGTGCAGCAAGTCACTCCTCA  692

seq1  AAAGTTTGAAGATTTGTCTCGGATATTTTTCTTATTACTACCTTATATGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGAAGATTTGTCTCGGATATTTTTCTTATTACTACCTTATATGG  742

seq1  TAATCACTAGGTTCAAATGAAAGAACACAAGTAAAAGTCCTTGAAAAACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTAGGTTCAAATGAAAGAACACAAGTAAAAGTCCTTGAAAAACC  792

seq1  TATAAATAGAATTATTCTGCTACTATTCAAAGTCAGCTTGTTTAGGTTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAGAATTATTCTGCTACTATTCAAAGTCAGCTTGTTTAGGTTTG  842

seq1  CCTAAAATGAAATTTGTACAAAAGATTTGTTACTCCTTTCCATTTCTCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATGAAATTTGTACAAAAGATTTGTTACTCCTTTCCATTTCTCAT  892

seq1  CAAAAGCATGCATTTCACTTCTGTGCTAGTTTATAACCATGAAAAGCAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCATGCATTTCACTTCTGTGCTAGTTTATAACCATGAAAAGCAAA  942

seq1  TCCCTACAGGTCCTAATTAAGTTCCTGCTTCCTCTGCCTCCTCAGGAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACAGGTCCTAATTAAGTTCCTGCTTCCTCTGCCTCCTCAGGAATA  992

seq1  ATTGGGGGACTCTTTCTCAGTCTGGTGACCTTACTTCATACAGTGTTCTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGGACTCTTTCTCAGTCTGGTGACCTTACTTCATACAGTGTTCTC  1042

seq1  CAATTTCATGTATTTTTCTGCAATTTTCAAAATTTTAGTATCTACTTACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCATGTATTTTTCTGCAATTTTCAAAATTTTAGTATCTACTTACA  1092

seq1  GCCATATAGAATTC  1112
      ||||||||||||||
seq2  GCCATATAGAATTC  1106