BAC Information

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BAC

Clone NameB6Ng01-227O24
Chromosome2 (Build37)
Map Location 8,068,493 - 8,069,676
singlet/doubletsinglet
Overlap geneLOC672230
Upstream geneLOC100040648
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227O24.bB6Ng01-227O24.g
ACCGA041478GA041479
length9691,159
definitionB6Ng01-227O24.b B6Ng01-227O24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaaatggggttatttgatt
ttctgaagtccaccttcttgacttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggtatggatcgattcgc
attcttctacatgataacaaccagttgagccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccatcagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatagggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacctgaagtttttatcata
cagatctttcacttcccttagttagagtcacaccgagatatgtatattat
ttgtgactattgagaaggg

gaattctcagtgatggaaacacaggatgccaggtcacattgccccaacaa
tcatgaaagcagagaaagggagagacagaaacctccagggtaaatcttcc
cacatcactgaactaagtctagaatgctttactggacatttttaggaaat
tctagaacctatcaatttgacaaccaatattaaccagatattggaatctg
gccacaggatcacaaatatggtaccaatctatgagggctatccctttgtc
catgcatcttgcatctggacctggctgggaccttacagaatccctcatga
aggccattgcagagtggggctacagctgcaccaccgcagcttagtgggtg
attgtgagtgacattaaggagaaattgtgctatgtttcattgaattttga
acaagaattggctactgccaatttcggaagagctatgacctgacagatgg
gcaggtattcactattgacaatgagcaactccagtgtctacaggccctcc
agggtcttccaacactcagtccttggcatggagccctctggcatccttga
gaccatcttaaaacccatcatgaagttctatgtgaacatccacaaggtcc
tgtatgccaacacactgttgcctggtggcacaaacctgtttcaaggcatt
gctactaggatgcagaaggaaaacacggccctagcatgcagcacaatgaa
aattaagattattgccctctctgagtacaagtctagattagaggctgcat
cctggcctcactgtctaccttactgcaaatgtggatcagcaagcaggagt
ctatgttgagccctttcatggtccacttcaaatgcttccagatggtctga
gcaggtgcccggaaccaagtgcaggagctgatcctgaagtatcagtttgc
cttggcaaatgtacacacttgatgttagtttctccaaaccggagaaacct
ttgaagagaaattgttctgaagctcatatctgatatcagtactagatgtc
aataacaaatttttgactgggatcaaggtacagctctagatatgtgaata
ccctctccacatcttgattactctagtctagccagctggtcactggtgct
gtggagacagctgagtcctagcaatagactcccgcctccatcgggaattt
ctctactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8068493_8069676
seq2: B6Ng01-227O24.g_66_1224 (reverse)

seq1  TAAGTAGAGAAAAACACAGAATGGAAGCGGGGGTCCTATGGCTCTGACTT  50
      ||||||||||||  | |   ||||| ||||| || |||| |||  |||| 
seq2  TAAGTAGAGAAATTCCC--GATGGAGGCGGGAGT-CTATTGCTAGGACT-  46

seq1  TCCCACCCTGCTCCACAGGCACCAAGTGACCAGGCTGGCTAGACTAAGGA  100
         || |   ||||||| ||||| |||||||| |||||||||||||  ||
seq2  ---CAGCTGTCTCCACA-GCACC-AGTGACCA-GCTGGCTAGACTA--GA  88

seq1  GTAAATCAAGATGTGGAGAGGGTATTAAACATATACAAAAGAAACTGTTA  150
      || |||||||||||||||||||||||  |||||| | | ||   ||| ||
seq2  GT-AATCAAGATGTGGAGAGGGTATT-CACATAT-CTAGAG---CTG-TA  131

seq1  ACTTGAATCCAAGTTCAAAAATTTGTATTTGACAATCTAGTACTGATATC  200
       |||| |||| || ||||||||||||  ||||| ||||||||||||||||
seq2  CCTTG-ATCCCAG-TCAAAAATTTGTTATTGAC-ATCTAGTACTGATATC  178

seq1  AGATATGAGCTTCAAGAACAAATTTCTCTTCAAAGGTTTCTTCCGGTTTG  250
      ||||||||||||| ||||| |||||||||||||||||||| |||||||||
seq2  AGATATGAGCTTC-AGAAC-AATTTCTCTTCAAAGGTTTC-TCCGGTTTG  225

seq1  GAGAAACTAACATCAAGTGTGTACATTTGCCAAGGCAAACTGATACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACTAACATCAAGTGTGTACATTTGCCAAGGCAAACTGATACTTCA  275

seq1  GGATCAGCTCCTGCACTTGGTTCCGGGCACCTGCTCAGACCATCTGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGCTCCTGCACTTGGTTCCGGGCACCTGCTCAGACCATCTGGAAG  325

seq1  CATTTGAAGTGGACCATGAAAGGGCTCAACATAGACTCCTGCTTGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAGTGGACCATGAAAGGGCTCAACATAGACTCCTGCTTGCTGAT  375

seq1  CCACATTTGCAGTAAGGTAGACAGTGAGGCCAGGATGCAGCCTCTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGCAGTAAGGTAGACAGTGAGGCCAGGATGCAGCCTCTAATCT  425

seq1  AGACTTGTACTCAGAGAGGGCAATAATCTTAATTTTCATTGTGCTGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTACTCAGAGAGGGCAATAATCTTAATTTTCATTGTGCTGCATG  475

seq1  CTAGGGCCGTGTTTTCCTTCTGCATCCTAGTAGCAATGCCTTGAAACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCCGTGTTTTCCTTCTGCATCCTAGTAGCAATGCCTTGAAACAGG  525

seq1  TTTGTGCCACCAGGCAACAGTGTGTTGGCATACAGGACCTTGTGGATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCACCAGGCAACAGTGTGTTGGCATACAGGACCTTGTGGATGTT  575

seq1  CACATAGAACTTCATGATGGGTTTTAAGATGGTCTCAAGGATGCCAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAACTTCATGATGGGTTTTAAGATGGTCTCAAGGATGCCAGAGG  625

seq1  GCTCCATGCCAAGGACTGAGTGTTGGAAGACCCTGGAGGGCCTGTAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGCCAAGGACTGAGTGTTGGAAGACCCTGGAGGGCCTGTAGACA  675

seq1  CTGGAGTTGCTCATTGTCAATAGTGAATACCTGCCCATCTGTCAGGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTGCTCATTGTCAATAGTGAATACCTGCCCATCTGTCAGGTCAT  725

seq1  AGCTCTTCCGAAATTGGCAGTAGCCAATTCTTGTTCAAAATTCAATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCCGAAATTGGCAGTAGCCAATTCTTGTTCAAAATTCAATGAAA  775

seq1  CATAGCACAATTTCTCCTTAATGTCACTCACAATCACCCACTAAGCTGCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCACAATTTCTCCTTAATGTCACTCACAATCACCCACTAAGCTGCG  825

seq1  GTGGTGCAGCTGTAGCCCCACTCTGCAATGGCCTTCATGAGGGATTCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCAGCTGTAGCCCCACTCTGCAATGGCCTTCATGAGGGATTCTGT  875

seq1  AAGGTCCCAGCCAGGTCCAGATGCAAGATGCATGGACAAAGGGATAGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCCAGCCAGGTCCAGATGCAAGATGCATGGACAAAGGGATAGCCC  925

seq1  TCATAGATTGGTACCATATTTGTGATCCTGTGGCCAGATTCCAATATCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATTGGTACCATATTTGTGATCCTGTGGCCAGATTCCAATATCTG  975

seq1  GTTAATATTGGTTGTCAAATTGATAGGTTCTAGAATTTCCTAAAAATGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATTGGTTGTCAAATTGATAGGTTCTAGAATTTCCTAAAAATGTC  1025

seq1  CAGTAAAGCATTCTAGACTTAGTTCAGTGATGTGGGAAGATTTACCCTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGCATTCTAGACTTAGTTCAGTGATGTGGGAAGATTTACCCTGG  1075

seq1  AGGTTTCTGTCTCTCCCTTTCTCTGCTTTCATGATTGTTGGGGCAATGTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTGTCTCTCCCTTTCTCTGCTTTCATGATTGTTGGGGCAATGTG  1125

seq1  ACCTGGCATCCTGTGTTTCCATCACTGAGAATTC  1184
      ||||||||||||||||||||||||||||||||||
seq2  ACCTGGCATCCTGTGTTTCCATCACTGAGAATTC  1159


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