BAC Information

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BAC

Clone NameB6Ng01-229F15
Chromosome2 (Build37)
Map Location 19,661,054 - 19,662,163
singlet/doubletsinglet
Overlap genenone
Upstream geneBC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534, 4921504E06Rik, LOC100041244, Otud1, LOC667564
Downstream geneLOC100041302, LOC433406, LOC654360, LOC667609, Etl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229F15.bB6Ng01-229F15.g
ACCGA042526GA042527
length1,2311,105
definitionB6Ng01-229F15.b B6Ng01-229F15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagatggactccagaaaatcaaataaccctattaaaaaatg
gaggacagagctaaacaaggaattcttgactgaggaataccaaatggctg
tgaagtatctaaaacaatgtttaacatccttaatcatcatggaaatgcaa
atccaaacaaccctaagattccacctcacaacagtcagaatggctaagat
caaaacctctggtgatagcacatgctggcaaggatgtggagaaagggaaa
cactcctctattgctggtgggaatgcaagctggtacaactactttggaaa
tcagtctggcagttcatcagaaaattgggcatagctctactggaagatcc
agcaataccactcctgggcatgtagaagaatgtgaaatgatgcagtctta
tctccttgataccagaagatactccaacttgtaacaaggacacatgctca
actatgttcatagcagccttatttataatagcccgaagctggaaaaaccc
ccaaagtccctcaacagaggaatggatacagaaaatgtgatacatttaca
caatggagtactactccactattaaaaacaatgtattcctgaaattcttt
gacaaatggatggatctcgagcatatcatcctaagtgaggtaacccaatc
acaaaagaacacacatgatatgcactcactgataagtgcatattagtcca
aaagctcagaatactgaagacacaatttgcaaaacacatgaaactcaagt
agaaggaagaccaaagtgtggatacttcaatctttcttaaaagggggata
aatacccatggaaaggagataccgagacaaagtgtaagcagagcctgaag
ctatgacctcccagagactgcccccacctggagttctatcccataaacca
ccacaaaacccagacactatggcagatgccaacaagagctttctgaccgg
aggctgttattgcttgtctcccaagagctcttcagtgactggcaaattac
agtagtgatgcctcacagccatccattggactgaagtaagggatccccag
tgaaagagctagagaaagtactcaggagctgagtgttttgccagttcctt
aggaagaaacgacatatgaacctaacattatcttctgagaacttctctgg
ggaacttaatcatcatcccccccgaaaataaaatattggtgtgtgtatac
tcaaggtctctacgacctggtcccatacgta
gaattccacagggatgtgagctaggccttcaggagagtggagaagtgatg
aagatgggaggagaaatcatagaaggagctgggctggagagatggctcac
tggttaaaagcactgactgctcttccagaggtcctgagttcaattcccag
caaccatgtcgtaactcacaaccatctataatggggtctgatgacctctt
ctggtgtgcaacagtgtatccacatacataaaataaataaaaggagtgag
tctgacttgtttattttgtagttttctccaaatggagatagaagagggaa
gaaactaaaatggaggatgaaggattttaagtgcaggtagggaagagaga
tggaagggcagagggtgagtggggtcaaggagtcaaaacaagtcagtcag
aatgctttcaggaaacttgctactctgttagctaattaaaaataaaatga
aaataaagctaaaataaaaaagagaataagaagcaagcaaaaatgaacaa
caaaatgaggatctatgggaagagaaaaggcaagcataagagaaaagaga
gacagagaggattcaaattcaatccttgtaagtaacagatcaaaacccct
aatgtctgccaagttgtcctgccctaattgtattccttcgttataaaact
aagtgagtcgtaagatttcacaattatagtccagctgtgaatttgagcca
atttataaacaagatttcagaaagaataggtagctatactctatttccaa
ataccacatgattaaaggccagacttcagaagaggcttggctgagctcat
gggccctaatatcatcacttagccattacagttcttgggctaattatctt
tccataactaaagtcccacacctctaaagaggatatatgataataaaatg
accatttggggcccaagtaagaatgaaagaggtcacacgcatgaattgct
ccagaagtgtgtggttacagtaaagatttcattctgtcaaaccttaaaca
cacaggatctacttttacaggtaaatctcactctcccttctggagactct
tacggttacaggtcaaatccaagatctcagctgcatgaatattcgtcagc
tcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_19661054_19662163
seq2: B6Ng01-229F15.g_66_1170 (reverse)

seq1  GCTGAAGCTGACGATATTTCATTGCAGGCTGAGATTCTTTGGGATTTGA-  49
      |||| |||||||||   |||| |||| ||||||| ||||  |||||||| 
seq2  GCTG-AGCTGACGAATATTCA-TGCA-GCTGAGA-TCTT--GGATTTGAC  44

seq1  CTGTAACCGT-AGAGTTCTCCAAGAAGGGAGAGTGAAGATTTAACTGTAA  98
      |||||||||| |||| ||||| ||||||||||||| ||||||| ||||||
seq2  CTGTAACCGTAAGAG-TCTCC-AGAAGGGAGAGTG-AGATTTACCTGTAA  91

seq1  AAGTAGAT-CTGTGTGTTTTAAGGTTTG-CAGAATGAAATCTTTACTGTA  146
      |||||||| ||||||| ||||||||||| |||||||||||||||||||||
seq2  AAGTAGATCCTGTGTG-TTTAAGGTTTGACAGAATGAAATCTTTACTGTA  140

seq1  ACCACACACTTCTGGAAGCAATTCATGCGTGTGACCTCTTTTCATTCTTA  196
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  ACCACACACTTCTGG-AGCAATTCATGCGTGTGACCTC-TTTCATTCTTA  188

seq1  CTGGGGCCC--AATGGTCATTTTATTATTCATATATCCTCTTTAGAGGTG  244
      || ||||||  |||||||||||||||| ||||||||||||||||||||||
seq2  CTTGGGCCCCAAATGGTCATTTTATTA-TCATATATCCTCTTTAGAGGTG  237

seq1  TGGGACTTTAGTTATGGAAAGATAATTAGCCCAAGAACTGTAATGGCTAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTTAGTTATGGAAAGATAATTAGCCCAAGAACTGTAATGGCTAA  287

seq1  GTGATGATATTAGGG-CCATGAGCTCAGCCAAGCCTCTTCTGAAGTCTGG  343
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGATGATATTAGGGCCCATGAGCTCAGCCAAGCCTCTTCTGAAGTCTGG  337

seq1  CC-TTAATCATGTGGTATTTGGAAATAGAGTATAGCTACCTATTCTTTCT  392
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCATGTGGTATTTGGAAATAGAGTATAGCTACCTATTCTTTCT  387

seq1  GAAATCTTGTTTATAAATTGGCTCAAATTCACAGCTGGACTATAATTGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTTGTTTATAAATTGGCTCAAATTCACAGCTGGACTATAATTGTG  437

seq1  AAATCTTACGACTCACTTAGTTTTATAACGAAGGAATACAATTAGGGCAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTACGACTCACTTAGTTTTATAACGAAGGAATACAATTAGGGCAG  487

seq1  GACAACTTGGCAGACATTAGGGGTTTTGATCTGTTACTTACAAGGATTGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTTGGCAGACATTAGGGGTTTTGATCTGTTACTTACAAGGATTGA  537

seq1  ATTTGAATCCTCTCTGTCTCTCTTTTCTCTTATGCTTGCCTTTTCTCTTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAATCCTCTCTGTCTCTCTTTTCTCTTATGCTTGCCTTTTCTCTTC  587

seq1  CCATAGATCCTCATTTTGTTGTTCATTTTTGCTTGCTTCTTATTCTCTTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGATCCTCATTTTGTTGTTCATTTTTGCTTGCTTCTTATTCTCTTT  637

seq1  TTTATTTTAGCTTTATTTTCATTTTATTTTTAATTAGCTAACAGAGTAGC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAGCTTTATTTTCATTTTATTTTTAATTAGCTAACAGAGTAGC  687

seq1  AAGTTTCCTGAAAGCATTCTGACTGACTTGTTTTGACTCCTTGACCCCAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCTGAAAGCATTCTGACTGACTTGTTTTGACTCCTTGACCCCAC  737

seq1  TCACCCTCTGCCCTTCCATCTCTCTTCCCTACCTGCACTTAAAATCCTTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCTGCCCTTCCATCTCTCTTCCCTACCTGCACTTAAAATCCTTC  787

seq1  ATCCTCCATTTTAGTTTCTTCCCTCTTCTATCTCCATTTGGAGAAAACTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCATTTTAGTTTCTTCCCTCTTCTATCTCCATTTGGAGAAAACTA  837

seq1  CAAAATAAACAAGTCAGACTCACTCCTTTTATTTATTTTATGTATGTGGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAACAAGTCAGACTCACTCCTTTTATTTATTTTATGTATGTGGA  887

seq1  TACACTGTTGCACACCAGAAGAGGTCATCAGACCCCATTATAGATGGTTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTTGCACACCAGAAGAGGTCATCAGACCCCATTATAGATGGTTG  937

seq1  TGAGTTACGACATGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTACGACATGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGC  987

seq1  AGTCAGTGCTTTTAACCAGTGAGCCATCTCTCCAGCCCAGCTCCTTCTAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCTTTTAACCAGTGAGCCATCTCTCCAGCCCAGCTCCTTCTAT  1037

seq1  GATTTCTCCTCCCATCTTCATCACTTCTCCACTCTCCTGAAGGCCTAGCT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCCTCCCATCTTCATCACTTCTCCACTCTCCTGAAGGCCTAGCT  1087

seq1  CACATCCCTGTGGAATTC  1110
      ||||||||||||||||||
seq2  CACATCCCTGTGGAATTC  1105