BAC Information

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BAC

Clone NameB6Ng01-231G15
Chromosome2 (Build37)
Map Location 89,990,487 - 89,991,545
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270
Downstream geneLOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231G15.bB6Ng01-231G15.g
ACCGA044023GA044024
length1,0621,193
definitionB6Ng01-231G15.b B6Ng01-231G15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcccttgacatatttcttcacatctattctttatttctttcttct
atgtctcaaggagtatccattttctattgtatcaatatattaatgtaggt
gaggtgaaaatatgtctcactagtaatttatgactaccattgtcactata
aaatataaaaagaaacactcacttagaagtcaatcaaggcttatcacttg
gaaaggtgattagcagaagagaaacaccaagggctaatgtaaaagttatg
gttgctctcatattccattgtaaacataaaaaccagtacaatcactctag
agaacaaactgccatcaagtgtatgtacaggtacttccatcagtatggtg
caaggagagtctaactctacacacaggtgttacgggcagtgtatggggcc
atttggaactgcttttgatgtaattttcccaaacttcacattcaggaata
ccatcttggtatcttaaagtcagtcaaggtcacagtatttaaatattgta
aatcatgaaacacaacaaatcagatcttttttatattaagaagcatcatt
tgcaggtatatgacttgatagagatgaccatgagagatttttctttcctg
atacagtaatagaacactcccagccacacccttcccaaggagacaggatg
aacttagaagagattaggcatagacagccccttaccctctcctactgtta
aatgaatatttcagataagatacttcacgagcttctgtctatgtagaata
taagcataacagtgtgtttggtcaggtacatccaatgctgctgtgcctgg
tatttatgtttgcctaactcttgaataaactatacaaaagctacttgaga
caaatataagtcaccatcttctttaccatctttatcactaacaaaggcaa
tgctttctgctcactcatgtgccactgctctgaattacttcactgttaca
tgaggcaaagatagtaaatttcctacaaacatagaaattatgaattatta
ctattttacaagagaaaaatgtattatatatacatatatatatatatgta
tatataatatat
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagca
gtgcgcagagaggcagtgcgcagactcattcattcccagagaggaacaaa
ggaaaatacaacaggcatttccagtctttgaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagagcttgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
tcgccggcatggcactaactcctgctgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagctctttggcatga
aactgcacaagcgcaggcccgagcaaacgcagctgctttgactccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcagacaaactaccattggggagcttatgcccagatttcctccacggc
tattagggcctggaaggcgctctcccgagcaggtgaaaccactggtcaat
taacaaaagttgtccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaaggagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcagggtc
tgtcgagagcttgggggacctctcaccaatgcaggcttagcggccgccat
ccttcaatctcagaaccgctcatggcagaaatgatcagaggacatgtttt
aattgcggaaagcctggcatttagaaagattgcaagagctcagataacag
gagggacctcttcacctcttgctctagtgtgcagggtatcatagagctga
ccagttcgctctgtgaggaataaaggcgatcctcctcactgaatgtccat
tcactgaatgtcaatagccggtcactccggaccctccgggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89990487_89991545
seq2: B6Ng01-231G15.b_44_1104

seq1  GAATTCCCTTGACATATTTCTTCACATCTATTCTTTATTTCTTTCTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTGACATATTTCTTCACATCTATTCTTTATTTCTTTCTTCTA  50

seq1  TGTCTCAAGGAGTATCCATTTTCTATTGTATCAATATATTAATGTAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAGGAGTATCCATTTTCTATTGTATCAATATATTAATGTAGGTG  100

seq1  AGGTGAAAATATGTCTCACTAGTAATTTATGACTACCATTGTCACTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAAATATGTCTCACTAGTAATTTATGACTACCATTGTCACTATAA  150

seq1  AATATAAAAAGAAACACTCACTTAGAAGTCAATCAAGGCTTATCACTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAAAGAAACACTCACTTAGAAGTCAATCAAGGCTTATCACTTGG  200

seq1  AAAGGTGATTAGCAGAAGAGAAACACCAAGGGCTAATGTAAAAGTTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGATTAGCAGAAGAGAAACACCAAGGGCTAATGTAAAAGTTATGG  250

seq1  TTGCTCTCATATTCCATTGTAAACATAAAAACCAGTACAATCACTCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCATATTCCATTGTAAACATAAAAACCAGTACAATCACTCTAGA  300

seq1  GAACAAACTGCCATCAAGTGTATGTACAGGTACTTCCATCAGTATGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAACTGCCATCAAGTGTATGTACAGGTACTTCCATCAGTATGGTGC  350

seq1  AAGGAGAGTCTAACTCTACACACAGGTGTTACGGGCAGTGTATGGGGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGTCTAACTCTACACACAGGTGTTACGGGCAGTGTATGGGGCCA  400

seq1  TTTGGAACTGCTTTTGATGTAATTTTCCCAAACTTCACATTCAGGAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACTGCTTTTGATGTAATTTTCCCAAACTTCACATTCAGGAATAC  450

seq1  CATCTTGGTATCTTAAAGTCAGTCAAGGTCACAGTATTTAAATATTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGTATCTTAAAGTCAGTCAAGGTCACAGTATTTAAATATTGTAA  500

seq1  ATCATGAAACACAACAAATCAGATCTTTTTTATATTAAGAAGCATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAACACAACAAATCAGATCTTTTTTATATTAAGAAGCATCATTT  550

seq1  GCAGGTATATGACTTGATAGAGATGACCATGAGAGATTTTTCTTTCCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTATATGACTTGATAGAGATGACCATGAGAGATTTTTCTTTCCTGA  600

seq1  TACAGTAATAGAACACTCCCAGCCACACCCTTCCCAAGGAGACAGGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAATAGAACACTCCCAGCCACACCCTTCCCAAGGAGACAGGATGA  650

seq1  ACTTAGAAGAGATTAGGCATAGACAGCCCCTTACCCTCTCCTACTGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAAGAGATTAGGCATAGACAGCCCCTTACCCTCTCCTACTGTTAA  700

seq1  ATGAATATTTCAGATAAGATACTTCACGAGCTTCTGTCTATGTAGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATTTCAGATAAGATACTTCACGAGCTTCTGTCTATGTAGAATAT  750

seq1  AAGCATAACAGTGTGTTTGGTCAGGTACATCCAATGCTGCTGTGCCTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAACAGTGTGTTTGGTCAGGTACATCCAATGCTGCTGTGCCTGGT  800

seq1  ATTTATGTTTGCCTAACTCTTGAATAAACTATACAAAAGCTACTTGAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTTTGCCTAACTCTTGAATAAACTATACAAAAGCTACTTGAGAC  850

seq1  AAATATAAGTCACCATCTTCTTTACCATCTTTATCACTAAC-AAGGCAAT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATATAAGTCACCATCTTCTTTACCATCTTTATCACTAACAAAGGCAAT  900

seq1  GCTTTCTGCTCACTCATGTGCCACTGCTCTGAATTACTTCACTGTTACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGCTCACTCATGTGCCACTGCTCTGAATTACTTCACTGTTACAT  950

seq1  GAGGCAAAGATAGTAAATTTCCTACAAACATAG-AATTATGAATTA-TAC  997
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  GAGGCAAAGATAGTAAATTTCCTACAAACATAGAAATTATGAATTATTAC  1000

seq1  TATTTTACAAGAGAAAAATGTAATATATATACATATATATATATATGTAT  1047
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATTTTACAAGAGAAAAATGTATTATATATACATATATATATATATGTAT  1050

seq1  ATATATATATAT  1059
      ||||| ||||||
seq2  ATATA-ATATAT  1061