BAC Information

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BAC

Clone NameB6Ng01-232D07
Chromosome2 (Build37)6 (Build37)
Map Location 55,576,542 - 55,577,37141,534,563 - 41,534,746
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGalnt13, LOC666936, Kcnj3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D07.bB6Ng01-232D07.g
ACCGA044601GA044602
length8371,013
definitionB6Ng01-232D07.b B6Ng01-232D07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(55,576,542 - 55,577,371)(41,534,563 - 41,534,746)
sequence
gaattcttaaacctttttttttaattcgtaatttttctccttagttactt
ttttatttccctttgttctgcttaataacacattgcaattttttgaattg
actaggaaaagtcatactttggaatttttttaccccaagaaactaaatga
tttttagataatttattcactgacttatattgctcaaagctatgtttaga
ttataagactttattatgatttcattcagtctcatttttagtacttgagc
cattgatacatttatcttatagacaagagcttgtgcattttattctctct
ctctctctctctctctctctctctctctctctctctcttttgtccttagt
atgctgcagatcaataagaaaaattttccaccttattgcattctgaaaag
agaaaccaataaactgtgacatgttgacatttccttgacatttccctaac
cacttctgatgctaaacattcaattggttatttgtaagtttatcaattta
tcagttgataatctttcccaaaatgttgctaatacataaaaggtattttc
agtccctaatgtttaagtaggcttcctgatcattaattgcatgacagctg
ggtcaatccctttgtttagccttaaagtttttatgatgtttacttttaag
tttatcatgtgaagcaggagtaattatagtttttgttccttgtaaactat
ttgccatttgaagtttagtatatgtgatagtttatgtatgctttggcccc
aggaggtggcaatattagaatttgtgaccctgtctgagtaggtttggcct
tgtttgaagttagtgtgtaattgtgggtgtggccatt
gaattccagactgttttccagagtggttgtataagcttgcaattccatca
gcaatggaggagtgtttctctttctccacatccttgccaacatctgctgt
cacctgaatttttgatcctagccattatgactggtgtgaggtggaatctc
agggttgttttgatttgcatttccctgatgattatggatgtttcaggata
gcatttgaaatgtaaatgaagaaaatatctaataaaaaattgaaaaaaaa
agaaaaaaaagatagcaatttaacataggaaccatgttttattactttca
cattttcatctatcatacattcttttattatgattattattattattaat
aatttatttatgcttatatgtaagtacattgtagctatcttcagacacac
cagaagaaggagtcagatctcattatgggtggttgtgagccaccatgtgg
ttgctgggatttgaactcaggaccttcacaagaacagtcaatgctctaaa
ccgctgagtcatctctccagccccctatcatacattctatcctgactgca
gttgcccctctctcactccctgtagtttcttccccctacctcccctttcc
ccagattccacctcgtctcggaaaagaacaggccttccatggacatcaac
ctaataaggcataacaaaccacagtttaagtccaggtacctcccatcata
taaaggctagacaagttgacccactaggaagaaaagtgtcccaaaaggca
ggcaaaacagacagagacagactctgatcccactgttaggaataccacag
aaacactgagctacacaaccataaaatatatgcagaggccccagtattgg
ctgttcctcagaaaattgggaactaatcacctcaaggccattttttacta
gtttggtatatacccggaaagagattccattattaccaggctccctgatc
cctgtgagctcacttgaattctggtcagttgatctgtggggacttgttct
tgtggtcctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_55576542_55577371
seq2: B6Ng01-232D07.b_43_879

seq1  GAATTCTTAAACCTTTTTTTTTAATTCGTAATTTTTCTCCTTAGTTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAACCTTTTTTTTTAATTCGTAATTTTTCTCCTTAGTTACTT  50

seq1  TTTTATTTCCCTTTGTTCTGCTTAATAACACATTGCAATTTTTTGAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTCCCTTTGTTCTGCTTAATAACACATTGCAATTTTTTGAATTG  100

seq1  ACTAGGAAAAGTCATACTTTGGAATTTTTTTACCCCAAGAAACTAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAAAAGTCATACTTTGGAATTTTTTTACCCCAAGAAACTAAATGA  150

seq1  TTTTTAGATAATTTATTCACTGACTTATATTGCTCAAAGCTATGTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGATAATTTATTCACTGACTTATATTGCTCAAAGCTATGTTTAGA  200

seq1  TTATAAGACTTTATTATGATTTCATTCAGTCTCATTTTTAGTACTTGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGACTTTATTATGATTTCATTCAGTCTCATTTTTAGTACTTGAGC  250

seq1  CATTGATACATTTATCTTATAGACAAGAGCTTGTGCATTTTATTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATACATTTATCTTATAGACAAGAGCTTGTGCATTTTATTCTCTCT  300

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGTCCTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGTCCTTAGT  350

seq1  ATGCTGCAGATCAATAAGAAAAATTTTCCACCTTATTGCATTCTGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCAGATCAATAAGAAAAATTTTCCACCTTATTGCATTCTGAAAAG  400

seq1  AGAAACCAATAAACTGTGACATGTTGACATTTCCTTGACATTTCCCTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAATAAACTGTGACATGTTGACATTTCCTTGACATTTCCCTAAC  450

seq1  CACTTCTGATGCTAAACATTCAATTGGTTATTTGTAAGTTTATCAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGATGCTAAACATTCAATTGGTTATTTGTAAGTTTATCAATTTA  500

seq1  TCAGTTGATAATCTTTCCCAAAATGTTGCTAATACATAAAAGGTATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGATAATCTTTCCCAAAATGTTGCTAATACATAAAAGGTATTTTC  550

seq1  AGTCCCTAATGTTTAAGTAGGCTTCCTGATCATTAATTGCATGACAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTAATGTTTAAGTAGGCTTCCTGATCATTAATTGCATGACAGCTG  600

seq1  GGTCAATCCCTTTG-TTAGCCTTAAAG-TTTTATGATGTTTACTTTTAAG  648
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  GGTCAATCCCTTTGTTTAGCCTTAAAGTTTTTATGATGTTTACTTTTAAG  650

seq1  TTTATCATGTGAAGCAGGAGTAATTATAG-TTTTGTTCCTTGTAAACTAT  697
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTATCATGTGAAGCAGGAGTAATTATAGTTTTTGTTCCTTGTAAACTAT  700

seq1  TTGCCA-TTGAAGTTTAGTATATGTGATAGTTTATGTATGCTT--GGCCC  744
      |||||| ||||||||||||||||||||||||||||||||||||  | |||
seq2  TTGCCATTTGAAGTTTAGTATATGTGATAGTTTATGTATGCTTTGGCCCC  750

seq1  AGGAGGTGGCAATATTAGAATTTGTGACCCTGTCTGAGTAGGTTTGGCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGGCAATATTAGAATTTGTGACCCTGTCTGAGTAGGTTTGGCCT  800

seq1  TG-TTGAAGTAGGTGTGTAATTGTGGGTGTGGCCATT  830
      || |||||||  |||||||||||||||||||||||||
seq2  TGTTTGAAGTTAGTGTGTAATTGTGGGTGTGGCCATT  837

seq1: chr6_41534563_41534746
seq2: B6Ng01-232D07.g_421_607

seq1  ATTTATTTATCATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACC  50
      ||||||||||  ||||||||||||||| ||||||| ||||||||||||||
seq2  ATTTATTTATGCTTATATGTAAGTACATTGTAGCTATCTTCAGACACACC  50

seq1  AGAAAAGGGAGTCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGG  100
      |||| | |||||||||||||||||||| ||||||||||||||||||||| 
seq2  AGAAGAAGGAGTCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGT  100

seq1  TGCTGGGATTTGAATTCAGGACCTTCAGAAGAGCAGTCAGTGCCCTTAAC  150
      |||||||||||||| |||||||||||| |||| |||||| ||| || |||
seq2  TGCTGGGATTTGAACTCAGGACCTTCACAAGAACAGTCAATGCTCTAAAC  150

seq1  CGCTGAACCATCTCTCCAGCCCC--AGC-TACATTCT  184
      ||||||  |||||||||||||||  | | ||||||||
seq2  CGCTGAGTCATCTCTCCAGCCCCCTATCATACATTCT  187