BAC Information

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BAC

Clone NameB6Ng01-232H14
Chromosome2 (Build37)
Map Location 85,758,892 - 85,760,028
singlet/doubletsinglet
Overlap geneOlfr1025-ps1
Upstream geneSlc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024
Downstream geneOlfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232H14.bB6Ng01-232H14.g
ACCGA044805GA044806
length1,1441,178
definitionB6Ng01-232H14.b B6Ng01-232H14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatagaaatgacttgaattcataaggataggttttatgtcata
ttgttggctgtgagctataaattgtttcaaattaaacaagtccagtctta
ataaattgaccataattggtgagtatcaccttaactgtgtgtggaatata
attttctaagtgaaaacagtgtagtaaggtgaaatatgagtcacttgtat
atgtaaaataacaatatgctgtgctggaaatatgacacagaagttacggg
ctctgatgcccttactgaggacatgagcaaatttcttatcaccctcataa
tacccagaaaccatctgtgaacattatactattgaaatagacaaaggatg
ggtacttatcacaagagaagtctaaagtccacacacaaatgagacaatta
aaatatgggttttacacaaaagtagctgtataataatatgtctaaagaat
taaattactatttatttgcaaatactagacaatggtaataaaaacataaa
ggagcagagggtcactgatgggagtgcatacccaatagcagatgaacact
aaagcctcctagtggaaatgtggcatttccaccaagatatatatatgcat
aaaggttcaatcagatgattaaaatcatttgaaagttctatcttgcagta
atgatatgagatatatctctgaaattttacaagttagcacatatttaaaa
aatcttaagaaataactgacctactgtggtaagaaaatttcagacacata
aataaaggaacttactaccaaagcatttgacaagtctacctttgccaaaa
cagctcccgtgcaccattatagagtaatagcaatatgtctgtgcagcttt
agaattcattttttattcattcatcaaggtagcatacccctgctgtgata
tatgtcatttctgagagacaaattaaaataaaaattgacagaaagtaatt
tggtaattttaaaatgttcattggtttggaagagcaaaggtgctgtacac
ctatcaaccttacttcaagaatacttccttcctaacaacctttcccttat
tgccatttttcacatcttgtttctgagcctatagaatccaggggttccac
atccgggccttaccaggatataagaccgcccaccattttcccct
gaattctcacctgaggaataccgaataccagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtggggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactacccagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaaatgtggacactatgcccctccttagaagtgggaa
caaaatacccttggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
agaagtggatgctcacagtcagctaatggatggatcacagggctcccaat
ggaggagctagagaaagtacccaaggagctaagggatctgcaacctaata
ggtgaacaacattatgaactaccagtacctggagctctgactctagctgc
atatgtatcaaagatggctatccgcatcactgtaaagaaagggccatgaa
ccgcactttatatggcctcagtcagaacgcagcaaaaggtaatggatgtg
acagatgtgcgctcatcgagtcactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85758892_85760028
seq2: B6Ng01-232H14.b_44_1187 (reverse)

seq1  AGGGGAAAATTGT-GGCGGTCTTTTATATCTTTGTAAG--CCCGATGTTG  47
      |||||||||| || |||||||  ||||||| | |||||  || ||||| |
seq2  AGGGGAAAATGGTGGGCGGTC--TTATATCCTGGTAAGGCCCGGATGTGG  48

seq1  AACCCCTTGA-TCTATAGCCTCAGAAACAAAGATGTGAAAAAT-GCAATA  95
      ||||||| || ||||||| ||||||||| |||||||||||||| ||||||
seq2  AACCCCTGGATTCTATAGGCTCAGAAAC-AAGATGTGAAAAATGGCAATA  97

seq1  AGG--AAAGTTGTTAAGAAGGAAGTATTCTTGAAGTAA-GTTGATAGGTG  142
      |||  || ||||||| |||||||||||||||||||||| |||||||||||
seq2  AGGGAAAGGTTGTTAGGAAGGAAGTATTCTTGAAGTAAGGTTGATAGGTG  147

seq1  TACAGCACCTTTGCTC-TCCAAACCAATGAACATTTTAAAATTACCAAAT  191
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACAGCACCTTTGCTCTTCCAAACCAATGAACATTTTAAAATTACCAAAT  197

seq1  TACTTTCTGTCAATTTTTATTTTAATTTGTCTCTCAGAAATGACATATAT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTGTCAATTTTTATTTTAATTTGTCTCTCAGAAATGACATATAT  247

seq1  CACAGCA-GGGTATGCTACCTTGATGAATGAATAAAAAATGAATTCTAAA  290
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGGGGTATGCTACCTTGATGAATGAATAAAAAATGAATTCTAAA  297

seq1  GCTGCACAGACATATTGCTATTACTCTATAATGGTGCACGGGAGCTGTTT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACAGACATATTGCTATTACTCTATAATGGTGCACGGGAGCTGTTT  347

seq1  TGGCAAAGGTAGACTTGTCAAATGCTTTGGTAGTAAGTTCCTTTATTTAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGGTAGACTTGTCAAATGCTTTGGTAGTAAGTTCCTTTATTTAT  397

seq1  GTGTCTGAAATTTTCTTACCACAGTAGGTCAGTTATTTCTTAAGATTTTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAAATTTTCTTACCACAGTAGGTCAGTTATTTCTTAAGATTTTT  447

seq1  TAAATATGTGCTAACTTGTAAAATTTCAGAGATATATCTCATATCATTAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGTGCTAACTTGTAAAATTTCAGAGATATATCTCATATCATTAC  497

seq1  TGCAAGATAGAACTTTCAAATGATTTTAATCATCTGATTGAACCTTTATG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGATAGAACTTTCAAATGATTTTAATCATCTGATTGAACCTTTATG  547

seq1  CATATATATATCTTGGTGGAAATGCCACATTTCCACTAGGAGGCTTTAGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATCTTGGTGGAAATGCCACATTTCCACTAGGAGGCTTTAGT  597

seq1  GTTCATCTGCTATTGGGTATGCACTCCCATCAGTGACCCTCTGCTCCTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTGCTATTGGGTATGCACTCCCATCAGTGACCCTCTGCTCCTTT  647

seq1  ATGTTTTTATTACCATTGTCTAGTATTTGCAAATAAATAGTAATTTAATT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTATTACCATTGTCTAGTATTTGCAAATAAATAGTAATTTAATT  697

seq1  CTTTAGACATATTATTATACAGCTACTTTTGTGTAAAACCCATATTTTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGACATATTATTATACAGCTACTTTTGTGTAAAACCCATATTTTAA  747

seq1  TTGTCTCATTTGTGTGTGGACTTTAGACTTCTCTTGTGATAAGTACCCAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCATTTGTGTGTGGACTTTAGACTTCTCTTGTGATAAGTACCCAT  797

seq1  CCTTTGTCTATTTCAATAGTATAATGTTCACAGATGGTTTCTGGGTATTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTCTATTTCAATAGTATAATGTTCACAGATGGTTTCTGGGTATTA  847

seq1  TGAGGGTGATAAGAAATTTGCTCATGTCCTCAGTAAGGGCATCAGAGCCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGATAAGAAATTTGCTCATGTCCTCAGTAAGGGCATCAGAGCCC  897

seq1  GTAACTTCTGTGTCATATTTCCAGCACAGCATATTGTTATTTTACATATA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTCTGTGTCATATTTCCAGCACAGCATATTGTTATTTTACATATA  947

seq1  CAAGTGACTCATATTTCACCTTACTACACTGTTTTCACTTAGAAAATTAT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACTCATATTTCACCTTACTACACTGTTTTCACTTAGAAAATTAT  997

seq1  ATTCCACACACAGTTAAGGTGATACTCACCAATTATGGTCAATTTATTAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACACACAGTTAAGGTGATACTCACCAATTATGGTCAATTTATTAA  1047

seq1  GACTGGACTTGTTTAATTTGAAACAATTTATAGCTCACAGCCAACAATAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGACTTGTTTAATTTGAAACAATTTATAGCTCACAGCCAACAATAT  1097

seq1  GACATAAAACCTATCCTTATGAATTCAAGTCATTTCTATGAGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAAACCTATCCTTATGAATTCAAGTCATTTCTATGAGAATTC  1144