BAC Information

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BAC

Clone NameB6Ng01-233G03
Chromosome2 (Build37)
Map Location 142,774,691 - 142,775,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233G03.bB6Ng01-233G03.g
ACCGA045460GA045461
length1,1631,174
definitionB6Ng01-233G03.b B6Ng01-233G03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattagtgtgggccactatcacactactttggctgtaaaatgag
ttccttggtcagaagcaatacggtttggaataccatgactatagataagg
catgctgtgagtctagggatggtggttttgacagaagcattctgtcaaaa
tgcaggaaaggcaaatccataccagaataagtatctacaccagtaagaag
gaaacactgtcctttccatggaagaagtggaccaatgtagtcaacctgcc
accaggttgctggctggtcacctcgaggaatggtgctatatctggggctc
agtgttggattctgttgttggcagatctggcattcagcagcagctataac
caggtcagccttggtgagttgaagtctgtgttcttgagcccaagcataac
gacctgccaactttgttcatgtgcccactaagcaatgacagggatgactg
gggaaagaggctgactgttcacagaatgggttatcctatccacttgatta
ttgaactcctcctcagctaaagtcaccttttgatgaacatttacatagga
cacaaatatcttcacatcctttgcccatttagagagatctatccacatag
ttcttccctagatgtctttctcaacaattttccaattgtaatttttccaa
gtttctgaccatccagccaatccactcgctacagcccatgagtcattgaa
catctggcgatattttcttccaacaagctgtaataacatgtgtactgcca
gaagtctgcccactgtgaagactttccttcatctgtatctttcagggttg
tcctggaaaagggttgcaatgctgcagctgtccacttcttgatgttgcct
gtataatgtgcagatccatcagcaaacctggtcctagtcttctcttcttc
agtcagctgttcaaagggaacaccctgtgaggctatagaagtgcttggca
gcagatggcattgtaacagatgtagaaaccatgggcatttgagcaacttc
tcatgtaacttgctttacctttaaggaccttgctctgacctgatcaccga
tatattaccaacttcaatttgaataatagaactggcctcctggtgccata
tccaatttaatggacttggaggtctgataagcatccagcttctcatgata
tgggtagttccag
gaattcctgatctttctaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccccatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttccgtatattaaacc
atccctgtatccctgtaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgagtatttttgc
attgatattcataagggaaattggtctgaagttctatgtctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtttcttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaactcatctg
gtcctgggcttttttttggctgggagactgttaataactgcttctatttc
tttaggggatatgggactgtttagatcgttaacttgatcctgatttaact
ttggtgcctgatatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtcccccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcttttggttaattccttg
aatagttcttcttgtttccacttgattgatttcaccccggaatttgatta
tttcctgctgtctactcctcttgggtgaattttcttcctttttttctaga
gcgtttggatgtgttgtcaagctgctagtgtgtgttctttccagtttctt
cttggaggcactcagagcttatgagtttccctcttagaaatgctttcatt
gtgtccataggttttggtatgtgtggctttcaattttcattaactctaaa
agtctttaatttcttttctttattcccttcttgacaaggtgccattggaa
aagaaggtttggttcaggttccacgtgcaataattggctgccataattat
gttgattggaagatcagccttagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142774691_142775206
seq2: B6Ng01-233G03.g_726_1239 (reverse)

seq1  ACTAAGGCTGATCTTCAATAACAAAAAAAAAATAGTAGAAAGCCAACACT  50
      |||||||||||||||| | | ||| | ||  ||    |  ||||||   |
seq2  ACTAAGGCTGATCTTCCA-ATCAACATAATTAT----GGCAGCCAATTAT  45

seq1  --CACGCGGAAACTGAA--TAACACTCTTCT-CAATGATACCTTGGTCAA  95
        |||| |||| |||||   |||  |||| | |||||  ||||| |||||
seq2  TGCACGTGGAACCTGAACCAAACCTTCTTTTCCAATGGCACCTT-GTCAA  94

seq1  GGAAGGAATAAAG-AAAGAAATTAAAGACTTTTTAGAGTTTAATGAAAAT  144
      | | ||||||||| ||||||||||||||| |||||||| |||||||||||
seq2  GAAGGGAATAAAGAAAAGAAATTAAAGAC-TTTTAGAG-TTAATGAAAAT  142

seq1  --GAAGCCACAACGTACCCAAACCTATGGGACACAATGAAAGCATTTCTA  192
         ||||||| || |||| |||||||| ||||||||||||||||||||||
seq2  TGAAAGCCAC-ACATACCAAAACCTAT-GGACACAATGAAAGCATTTCTA  190

seq1  AGAGGGAAACTCAT-AGCTCTGAGTGCCTCCAAGAAGAAACGGGAGACAG  241
      |||||||||||||| |||||||||||||||||||||||||| ||| | | 
seq2  AGAGGGAAACTCATAAGCTCTGAGTGCCTCCAAGAAGAAACTGGAAAGAA  240

seq1  CACATACTAGCAGCTTGACAACACATCTAAAAGCCCTAGAAAAAAAGGAA  291
      |||| |||||||||||||||||||||| ||| || |||||||||||||||
seq2  CACACACTAGCAGCTTGACAACACATCCAAACGCTCTAGAAAAAAAGGAA  290

seq1  GCAAATTCACCCAAGAGGAGTAGATGGCAGGAAATAATCAAACTCAGGGG  341
      | ||||||||||||||||||||||  |||||||||||||||| || ||||
seq2  GAAAATTCACCCAAGAGGAGTAGACAGCAGGAAATAATCAAATTCCGGGG  340

seq1  TGAAATCAACCAAGTGGAAACAAAGAAGAACTATTCAAAGAATTAACCAA  391
      ||||||||| ||||||||||| |||||||||||||||| |||||||||||
seq2  TGAAATCAATCAAGTGGAAAC-AAGAAGAACTATTCAAGGAATTAACCAA  389

seq1  ACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGC  441
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGC  439

seq1  TAGACTCACTAGAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCACTAGAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAA  489

seq1  ATGAAAAGGGAGACATAACAACAGA  516
      |||||||||| ||||||||||||||
seq2  ATGAAAAGGGGGACATAACAACAGA  514