BAC Information

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BAC

Clone NameB6Ng01-234G03
Chromosome2 (Build37)
Map Location 31,348,027 - 31,538,956
singlet/doubletdoublet
Overlap geneAss1, Fubp3, LOC100041465, Prdm12, Exosc2
Upstream geneCstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076
Downstream geneAbl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234G03.bB6Ng01-234G03.g
ACCGA046164GA046165
length589463
definitionB6Ng01-234G03.b B6Ng01-234G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,538,460 - 31,538,956)(31,348,027 - 31,348,495)
sequence
agttatctgtggatccctcaaacatgggttaaattaaaagttgtcatcta
taacactgtctcagaaacacacatatgcaaagttgtctagcgatggtgct
atgatgattaatcttgattgtaaatgtgataggatttgaatcaccatgga
aacggacctccagactgctgtactgtcagcttctagactggggtgaggtg
ggaagcagcatcatcatttcactggctagagcttgggctgggtacagaag
agaaaggcaagcacaggcattcacctgttcctgctgtggatacgatgtga
cttcacatgacaactgctatgttagatgagttagctcctgtcaccaggac
agactgggcagccctaactagagtgggtagattattgaaaattgtaaaaa
caagccaggcagtggtggcgcacgcttttaatccctgcacttgggaggca
gaggcagcagatttctgagttcgaggccagcctggtctacagagtgagtc
ccaggacagccagggctacacggagaaaccctgtgtgaaaaaacaaaaca
aaacaaaacaaacaaaatatatatatatatatataaaac
agtgccctcttctggcctccaggggaactgcaaatgtgtggtacccagac
atacacacaagcaaacactcctacccataaaataaaaataaacgggaagc
cgggcatggtggcgcacacctttaatcccagcactcgggaggcagaggca
ggcggatttctgagttcgaggccagcctggtctacagagtgagttccagg
acagccagggctgcacagagaaaccctgtctcgaaaattaaaataaaata
aacgggaaagagaaagcgcagctcttctgttcctgagcttgagttaccat
ttccgctcgtgtgtgcaggcaagcccagcacaatgacctggcaagcctgc
ttcctgggtattgggaacaacttctcagaggattaaaaaccctcaaggat
aagtggaggcctggggctgtacccacaagaccgagccttgtcagtggggg
tgggggaggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_31538460_31538956
seq2: B6Ng01-234G03.b_143_638 (reverse)

seq1  GTTTTATATATATATATATATATTTTGTTTGTTTTGTTTTGTTTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATATATATATATATATATTTTGTTTGTTTTGTTTTGTTTTGTTTT  50

seq1  TTCACACAGGGTTTCTCCGTGTAGCCCTGGCTGTCCTGGGACTCACTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACAGGGTTTCTCCGTGTAGCCCTGGCTGTCCTGGGACTCACTCTG  100

seq1  TAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAA  150
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGACCAGGCTGGCCTCGAACTCAGAAATCTG-CTGCCTCTGCCTCCCAA  149

seq1  GTGCAGGGATTAAAAGCGTGCGCCACCACTGCCTGGCTTGTTTTTACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGGATTAAAAGCGTGCGCCACCACTGCCTGGCTTGTTTTTACAAT  199

seq1  TTTCAATAATCTACCCACTCTAGTTAGGGCTGCCCAGTCTGTCCTGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAATCTACCCACTCTAGTTAGGGCTGCCCAGTCTGTCCTGGTGA  249

seq1  CAGGAGCTAACTCATCTAACATAGCAGTTGTCATGTGAAGTCACATCGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTAACTCATCTAACATAGCAGTTGTCATGTGAAGTCACATCGTA  299

seq1  TCCACAGCAGGAACAGGTGAATGCCTGTGCTTGCCTTTCTCTTCTGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCAGGAACAGGTGAATGCCTGTGCTTGCCTTTCTCTTCTGTACC  349

seq1  CAGCCCAAGCTCTAGCCAGTGAAATGATGATGCTGCTTCCCACCTCACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAAGCTCTAGCCAGTGAAATGATGATGCTGCTTCCCACCTCACCC  399

seq1  CAGTCTAGAAGCTGACAGTACAGCAGTCTGGAGGTCCGTTTCCATGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTAGAAGCTGACAGTACAGCAGTCTGGAGGTCCGTTTCCATGGTGA  449

seq1  TTCAAATCCTATCACATTTACAATCAAGATTAATCATCATAGCACCA  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCCTATCACATTTACAATCAAGATTAATCATCATAGCACCA  496

seq1: chr2_31348027_31348495
seq2: B6Ng01-234G03.g_69_537

seq1  GAATTCAGTGCCCTCTTCTGGCCTCCAGGGGAACTGCAAATGTGTGGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCCCTCTTCTGGCCTCCAGGGGAACTGCAAATGTGTGGTAC  50

seq1  CCAGACATACACACAAGCAAACACTCCTACCCATAAAATAAAAATAAACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATACACACAAGCAAACACTCCTACCCATAAAATAAAAATAAACG  100

seq1  GGAAGCCGGGCATGGTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCGGGCATGGTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCA  150

seq1  GAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGT  200

seq1  TCCAGGACAGCCAGGGCTGCACAGAGAAACCCTGTCTCGAAAATTAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAGGGCTGCACAGAGAAACCCTGTCTCGAAAATTAAAAT  250

seq1  AAAATAAACGGGAAAGAGAAAGCGCAGCTCTTCTGTTCCTGAGCTTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACGGGAAAGAGAAAGCGCAGCTCTTCTGTTCCTGAGCTTGAGT  300

seq1  TACCATTTCCGCTCGTGTGTGCAGGCAAGCCCAGCACAATGACCTGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTTCCGCTCGTGTGTGCAGGCAAGCCCAGCACAATGACCTGGCAA  350

seq1  GCCTGCTTCCTGGGTATTGGGAACAACTTCTCAGAGGATTAAAAACCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTCCTGGGTATTGGGAACAACTTCTCAGAGGATTAAAAACCCTC  400

seq1  AAGGATAAGTGGAGGCCTGGGGCTGTACCCACAAGACCGAGCCTTGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAAGTGGAGGCCTGGGGCTGTACCCACAAGACCGAGCCTTGTCAG  450

seq1  TGGGGGTGGGGGAGGTTGG  469
      |||||||||||||||||||
seq2  TGGGGGTGGGGGAGGTTGG  469