BAC Information

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BAC

Clone NameB6Ng01-238K22
Chromosome2 (Build37)
Map Location 46,012,746 - 46,013,721
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream geneLOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238K22.bB6Ng01-238K22.g
ACCGA049313GA049314
length1,1741,137
definitionB6Ng01-238K22.b B6Ng01-238K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaagggtatcatggtaacatgtatattttggcagtaaccaata
ctgtctagttggactggaagaaagcaagagtgaatccatgccttttaatg
taaacctagcatatgacttgtgcctggtgatgtcatgggccctagaggaa
ggagaatctactactgccattttcctagaccaaaataatttctgactgta
ttctaactgagagaccagatattgagtttaggctccatcatagagaacca
ggtctaagattaaactcaagttagctaacaagctccaacctagaaccagt
ttccaggttactcccaacaagatgtgcatctagcaccagtttctaggtta
ctcccaaacaatatcagtttctaggttactctctctaacaaatctgcctg
tggcactttacttcctaacaactatcaatgtggaagaaagcagaagttaa
gtttatggtttggttcccagcaccagccaattatgttaaaggacaacaaa
atcacataatggttctccaatcggatatattgcagggtagaaacctatca
cttgcttgccattttctataaaacctgatcctgttgaaagcttggggcct
tacccacacttccagtcaggatgggctgtgggcacaagctcaagcttcag
taaagacccaagtgtgattttatcagaagttggctccttgctggtctttt
ttttggggggggttataaatgctttttgaatgagcacagcataactactt
atctaaagtaacatctacagattaattagctgttatacctcatcaaaaaa
gtgttcatttttcttttgtagattgaagacctcatagaaatctctaacag
gctaaatatataacataaacttttatatgtaaaactcaggataacttgtg
gctgagggagatggcacaagattgtaagagccaggacatctaccaaaaat
taggaccgtgatatagctgtcccttgtgagactaggccggggctagcaac
acagagtggatgctctcagtcactattgatggatcacagggcctcatgat
gagctagagaaagtatcaaggagctaaagagatctggcaaccctatcggg
tggaacaacatatgaactaccagttacccgaagtcttgaacttagctgca
tgttatcaagaatgcctagtcggc
gaattctaagtttaatactttgaactagccctgagatttctagctcctac
ctggcaaactgtggaatgcctgattactatcaacactgggggcatttcat
ctgaatgagtaacattcttacaacattccaagcccagagtcggctcaagg
actgcctaggactgcctaggacattggtgaaggccaggaagcaaagttca
acctaatttaggtatttgacaaatcattccttggaggcacctataataaa
acagtactgaaagaaagcacacagatctgatccattcaccaactattgta
aggactaatttggagcattcatgctacgggatgggaaggctacaggagac
tgagttactgtgaaactttttgcctcaggactgcggccaatcttttggac
ttgccatgcagagttcactgcagtggatgtggcaatttcatatatgtgac
agtcctattgtatctataagacactgtttccttggtgtcatccaccatat
ctggctctttcaccccctcttctgcatgcctctctgaactctgggagaag
ctgcttgatcaaagcctcccatttaggaccgcatggtctaaactctctta
ctctcaacactttgtccatttctggatctctgtcttagtttccatttttt
ttttttttttttttttttttttttggaatagggagcttctgtgatttatg
gcaaggaagacactgatcctatgtttacgggcagaatggaaattcagagt
catttttattttctgtgggtaccagaacatcatctttgaattcttataac
ttaaaaacacaatgaaaaacctctctattttacccatgtttatctctgct
ctttatctctgtgggctgtgtgaaacaaactcagtagatttttagatgtg
tgactcatttctaacctctggtttcttctcagcataacatttcacacttg
accatgcagttcttagtcatttttccattaagtattattttttataaagg
aatacactaaataaaaggtatttacattaccctatgtatggagatttaat
tttaattactactaattaatttttacacttcaattttattgccgtcaccc
ttgaatgtgtctcactctctataactcttctcctacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46012746_46013721
seq2: B6Ng01-238K22.b_260_1221

seq1  GACCAGATATTGAGTTTAGGCTCCATCATAGAGAACCAGGTCTAAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGATATTGAGTTTAGGCTCCATCATAGAGAACCAGGTCTAAGATTA  50

seq1  AACTCAAGTTAGCTAACAAGCTCCAACCTAGAACCAGTTTCCAGGTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGTTAGCTAACAAGCTCCAACCTAGAACCAGTTTCCAGGTTACT  100

seq1  CCCAACAAGATGTGCATCTAGCACCAGTTTCTAGGTTACTCCCAAACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAAGATGTGCATCTAGCACCAGTTTCTAGGTTACTCCCAAACAAT  150

seq1  ATCAGTTTCTAGGTTACTCTCTCTAACAAATCTGCCTGTGGCACTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTCTAGGTTACTCTCTCTAACAAATCTGCCTGTGGCACTTTACT  200

seq1  TCCTAACAACTATCAATGTGGAAGAAAGCAGAAGTTAAGTTTATGGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACAACTATCAATGTGGAAGAAAGCAGAAGTTAAGTTTATGGTTTG  250

seq1  GTTCCCAGCACCAGCCAATTATGTTAAAGGACAACAAAATCACATAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGCACCAGCCAATTATGTTAAAGGACAACAAAATCACATAATGG  300

seq1  TTCTCCAATCGGATATATTGCAGGGTAGAAACCTATCACTTGCTTGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAATCGGATATATTGCAGGGTAGAAACCTATCACTTGCTTGCCAT  350

seq1  TTTCTATAAAACCTGATCCTGTTGAAAGCTTGGGGCCTTACCCACACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAAAACCTGATCCTGTTGAAAGCTTGGGGCCTTACCCACACTTC  400

seq1  CAGTCAGGATGGGCTGTGGGCACAAGCTCAAGCTTCAGTAAAGACCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGGATGGGCTGTGGGCACAAGCTCAAGCTTCAGTAAAGACCCAAG  450

seq1  TGTGATTTTATCAGAAGTTGGCTCCTTGCTGGTCTTTTTTTTGGGGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTTATCAGAAGTTGGCTCCTTGCTGGTCTTTTTTTTGGGGGGGG  500

seq1  TTATAAATGCTTTTTGAATGAGCACAGCATAACTACTTATCTAAAGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGCTTTTTGAATGAGCACAGCATAACTACTTATCTAAAGTAAC  550

seq1  ATCTACAGATTAATTAGCTGTTATACCTCATCAAAAAAGTGTTCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAGATTAATTAGCTGTTATACCTCATCAAAAAAGTGTTCATTTTT  600

seq1  CTTTTGTAGATTGAAGACCTCATAGAAATCTCTAACAGGCTAAATATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAGATTGAAGACCTCATAGAAATCTCTAACAGGCTAAATATATA  650

seq1  ACATAAACTTTTATATGTAAAACTCAGGATAACTTGTGGCTGAGGGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACTTTTATATGTAAAACTCAGGATAACTTGTGGCTGAGGGAGAT  700

seq1  GGCACAAAGATTGTAAGAGCCAGGACATCTACCAAAAATTAGGACCGTGA  750
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAC-AAGATTGTAAGAGCCAGGACATCTACCAAAAATTAGGACCGTGA  749

seq1  TATAGCTGTCCCTTGTGAGACTAGGCCGGGGCCTAGCAAACACAGAAGTG  800
      ||||||||||||||||||||||||||||||| ||||| ||||||| ||||
seq2  TATAGCTGTCCCTTGTGAGACTAGGCCGGGG-CTAGC-AACACAG-AGTG  796

seq1  GATGCTCTCAGTCAACTATTGGATGGATCACAGGGCCCCCAATGGAGGAG  850
      ||||||||||||| |||||| |||||||||||||||| |  || || |||
seq2  GATGCTCTCAGTC-ACTATT-GATGGATCACAGGGCCTC--AT-GATGAG  841

seq1  CTAGAGAAAGTATCCAAGGAGCTAAAGAGATCT-GCAACCCTATC-GGTG  898
      ||||||||||||| ||||||||||||||||||| ||||||||||| ||||
seq2  CTAGAGAAAGTAT-CAAGGAGCTAAAGAGATCTGGCAACCCTATCGGGTG  890

seq1  GAACAACATTATGAACTAACCAGTACCCCAGAGCTCTTGACTTTAGCTGC  948
      |||||||| |||||||| ||||||  ||| ||  ||||||  ||||||||
seq2  GAACAACA-TATGAACT-ACCAGTTACCC-GAAGTCTTGAACTTAGCTGC  937

seq1  ATATGTATCAAAAGATGGCCTAGTCGGC  976
      || | ||||  ||||  |||||||||||
seq2  ATGT-TATC--AAGAATGCCTAGTCGGC  962