BAC Information

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BAC

Clone NameB6Ng01-239A17
Chromosome2 (Build37)
Map Location 41,443,182 - 41,443,881
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239A17.bB6Ng01-239A17.g
ACCGA049576GA049577
length9821,134
definitionB6Ng01-239A17.b B6Ng01-239A17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtctcttggcgtggatcctcagtccatctagctctttctcaat
gccttcctgtccagctcatctctattcttttctgtcatccacaggtttac
agaaatgcattttacaagaaactttacaggtaccatttttttttcccaga
atccacagtacgtaacagaaaaaaacaggaggaagaggaagagaaggaga
tcacaacccaataaaataaagctgaaaatgagaaattaggaagtagacct
cacaggtaggcctcaccaataggataaaaaacatggaggaaacagtctca
agtcttgatgtcaaggtagaagaaatgataggtgtatcaaagaaaatgtt
aaatatataataaattaggaattaaatattctagaaacataggatacgat
aaaaagacggaacatggggataatagatacagaggaaggaagaaaaaata
ttttagttgaaagacacaaaacttatggaacatcaaatatacaggtccag
aaaaatattctcaagatatataacaataaataaaatctgaaaatgcgaaa
caaaggaaaggaaaaaaccccagtcatataggaagaaaggttcattagaa
taatacccaacttttcaattgagactctgaagaaattagggtctggatgg
atgttctaaaaattcttagaaatcatagttactaatccaggcttgatact
cattcacaattgatgtagaaagacaaatattccccaaatttaacaaattc
ctcaaataaaaacaaatttaagccatttttatcttccaacaaatctctat
agaagatgttagatgtaaaacatcagtctgaaatggttagctacatctaa
aaagacatagaaatatataatcccagaacactaaatcaaaaaggaagaga
aaatccattctataaaatcaaagaatcaataaatactgcacattaataaa
catattaatgggcttcaatttcccaataaaaa
gaattctgaggagttctgaaacaaccaggatcaaaggagggacaggctac
aattacagacacagacactacctcagagtaaaagtttggaaaacattttt
ccaagcaaatagtcccaagaaacatgccacagtagctattctaatattaa
aaaaaaacaaaaacaaaaacaaataacaaaaaacaaaacaaaaaaaaaaa
aacaaaaaacaaaaaacaaaaaaaaaaaaaaaaaaaaaacaaaacactcc
tgaccagggacttttttcttggggggaattttaatgattgtttctatttc
acaaagtattacagttctgtttcactttcttatataatcttgttttaact
ttggtaagtgatagatatccagaaaattatccaattctattaaattttct
aatttaatgaaatataagatttaacatatggtttccttagtgactgcatt
tatgtttctactttgatttttgcttttgataatttggatattctctgtca
tgctttcagttaatttgtataaggatttttagaatcttattgatttttat
caaagattcacctcttttttttctctattgattgtaattttgtgttcatt
tttttgtttgtttcttgctgatttcatttctgagattgattatctcctgc
tgtctactcttctttagaatgttattgttgttgttgcctttatatcattt
tacagatttcatgtatgctattaagttcctagcatgggatctctggaaat
gttttatgtaggcacttagtgctatagccttattccttagggtagccttc
attaggtctgcggtatattcaatttaattgtagtctagaaaacgttgagt
ttttgtttgttgtttgttttttgttttgttttgttttgtttttacttttt
aaaattctgccttgacctgagagtgtttagtttcatgatttgtaactttc
tgtgtttctttagtgtgatatccagtttatctggatgctgatgatgcatg
tactctactgatagtgctatagactccttaaagagttattttttgcgtag
gactctatcatatcgtagctgatactggcttcatgtgcatcaggacctgc
atgtaggtgactgtgactttagtgagtcaacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41443182_41443881
seq2: B6Ng01-239A17.b_42_741

seq1  GAATTCTGTCTCTTGGCGTGGATCCTCAGTCCATCTAGCTCTTTCTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTCTTGGCGTGGATCCTCAGTCCATCTAGCTCTTTCTCAAT  50

seq1  GCCTTCCTGTCCAGCTCATCTCTATTCTTTTCTGTCATCCACAGGTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTGTCCAGCTCATCTCTATTCTTTTCTGTCATCCACAGGTTTAC  100

seq1  AGAAATGCATTTTACAAGAAACTTTACAGGTACCATTTTTTTTTCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCATTTTACAAGAAACTTTACAGGTACCATTTTTTTTTCCCAGA  150

seq1  ATCCACAGTACGTAACAGAAAAAAACAGGAGGAAGAGGAAGAGAAGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACAGTACGTAACAGAAAAAAACAGGAGGAAGAGGAAGAGAAGGAGA  200

seq1  TCACAACCCAATAAAATAAAGCTGAAAATGAGAAATTAGGAAGTAGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCCAATAAAATAAAGCTGAAAATGAGAAATTAGGAAGTAGACCT  250

seq1  CACAGGTAGGCCTCACCAATAGGATAAAAAACATGGAGGAAACAGTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTAGGCCTCACCAATAGGATAAAAAACATGGAGGAAACAGTCTCA  300

seq1  AGTCTTGATGTCAAGGTAGAAGAAATGATAGGTGTATCAAAGAAAATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGATGTCAAGGTAGAAGAAATGATAGGTGTATCAAAGAAAATGTT  350

seq1  AAATATATAATAAATTAGGAATTAAATATTCTAGAAACATAGGATACGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATAATAAATTAGGAATTAAATATTCTAGAAACATAGGATACGAT  400

seq1  AAAAAGACGGAACATGGGGATAATAGATACAGAGGAAGGAAGAAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACGGAACATGGGGATAATAGATACAGAGGAAGGAAGAAAAAATA  450

seq1  TTTTAGTTGAAAGACACAAAACTTATGGAACATCAAATATACAGGTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTGAAAGACACAAAACTTATGGAACATCAAATATACAGGTCCAG  500

seq1  AAAAATATTCTCAAGATATATAACAATAAATAAAATCTGAAAATGCGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTCTCAAGATATATAACAATAAATAAAATCTGAAAATGCGAAA  550

seq1  CAAAGGAAAGGAAAAAACCCCAGTCATATAGGAAGAAAGGTTCATTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAAGGAAAAAACCCCAGTCATATAGGAAGAAAGGTTCATTAGAA  600

seq1  TAATACCCAACTTTTCAATTGAGACTCTGAAGAAATTAGGGTCTGGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCCAACTTTTCAATTGAGACTCTGAAGAAATTAGGGTCTGGATGG  650

seq1  ATGTTCTAAAAATTCTTAGAAATCATAGTTACTAATCCAGGCTTGATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTAAAAATTCTTAGAAATCATAGTTACTAATCCAGGCTTGATACT  700