BAC Information

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BAC

Clone NameB6Ng01-240B03
Chromosome2 (Build37)
Map Location 111,216,890 - 111,218,018
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283
Downstream geneOlfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240B03.bB6Ng01-240B03.g
ACCGA050332GA050333
length1,0001,130
definitionB6Ng01-240B03.b B6Ng01-240B03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaactcatctcttcctgggctttttttggttggaagac
ttttaatgactgcttctatttccttaggggttatgggaaagtttagatag
tgtatctggccctgatttaatgttggtacctgtcaagaaaatcatcaatt
tcatctagactttctagttttattgagtataggtaattatagtatgatct
gagatttttagaattttctgtttctgttatgtctctctttctatttctga
ctttgttgatttcaatactgtgtctgtgttatttagttagtttggctaaa
ggtttatcacatgttgattttttttcaaaaaaccagctttttgttttgtt
gatttttttttgtatacttctctttgtttctaattggttgatttcagcct
tgagtttgattattttttgctatttactccttctgggtgtgtttgcttct
ttttgttctagagctttcagatgtgctgttgagttgctggtgtaagatct
ctccaatttcttcatgaaggcactcagtgctacattgctaaatcttacat
tgctttcactgtgtcccataagtttgggtatattgtgctctcattttcat
taaattctagaaagtcattaatttttttatatatttcttcctaaaccaag
ttatcattgagtacagagatgtttcatttccatgtgtatatggatttttt
tcttgtttttgttgttattgaagatcaatatatgtccgtgttaatctgat
agaatgtatacgattatttcaatcttcttgtatctgttgaggcttgtttt
gtgaccaattatatggtcatttttagagaaggtagcatgagatgccaaga
ggaaggtacattcttttgttttaagatgaaatatgctataggtatctgtt
aaatccgtttatttcataagttcttgttagtttcactatgcctctgatta
gtttctgttccatgatctttccattgggtaagattatggtggtgggtttc

gaattctttttctatcactgcttaaaaaaatctagatgctaggtttggca
gcacttgggtgtaggtaacaaaacatgatcagcaattcaatgtaattcag
atacggatggtgagcttgagactagaattggcttcagaggacctcttgtc
aaaatgcaaagcaagtgaacaaacacataaataagtaagactctggaatt
ctgtgcactaatatttctttctctccaactcccccgttgtaaggccttga
ccaactttattcattctactgtgatacttccgtctcttcagattatttta
gagaaaataattataaatctcaatatcctgtgcgatagtcacattaattt
tagttttcatggtgttactgaaaaatttcatgttctcaatcattgtttta
tttctacatatttctaccagtggttttctgaggtctatcagctatgtgcc
tttccagtttttatcaacataaattttatttcctcagaatgtgaactgaa
gggtgttaattttaagtgaaacaatctttatattatattaggaccagatt
ttctctaaattgtagctatgcatttttatatatttgctttctaataattc
ctaaatcagttccttcctctagataactattataatttttttgcttctac
ttcttatttatatatcttgactacaatgaatgatactattgtctcctttc
ttgcttgtgtttatatcaatctacgggatgtgattttctaaattaattct
tgggtgtatttcttaagtactttttgaagttcttcaagacactgtacaca
attttgatgaaacagcagaatatatcagaggattttaacccacttattac
agaaaatgaatataacatatgaattactaattttaaactgacttgtaaac
ttacaaaaataaaagaaagcatttataaataatttattcaagataatttg
catggaaatttttaagttgtcaacttctgattttcagtaaaatataaagc
taacagaataaagaaaagcctgttagagctattatattagcagtgttgtt
atgatgtagacagatctattcagagatggagagatgtttatttggagcaa
agactaaaattccaggtagtcaattgccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111216890_111218018
seq2: B6Ng01-240B03.g_63_1192 (reverse)

seq1  TTGGCAATTGACTA-CTGAAATTTTGGTTCTTTGCT-CAAATAACATTCT  48
      |||||||||||||| ||| |||||| | |||||||| |||||||   |||
seq2  TTGGCAATTGACTACCTGGAATTTTAG-TCTTTGCTCCAAATAAACATCT  49

seq1  CTCATTCTCTGAATTAGATTCTTGTCTACATCATAAC-ACACTGCTAATA  97
      |||  |||||||| |||||   ||||||||||||||| ||||||||||||
seq2  CTCCATCTCTGAA-TAGAT--CTGTCTACATCATAACAACACTGCTAATA  96

seq1  T-ATAGCTCTAACAGGCTTTTCTTTATTCTGTTAGCTTTATATTTTACTG  146
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTCTAACAGGCTTTTCTTTATTCTGTTAGCTTTATATTTTACTG  146

seq1  AAAATCAGAAGTTGACAACTTAAAAA-TTCCATGCAAATTATCTTGAATA  195
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAATCAGAAGTTGACAACTTAAAAATTTCCATGCAAATTATCTTGAATA  196

seq1  AATTATTTATAAATGCTTTCTTTTATTTTTGTAAGTTTACAAGTCAGTTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTATAAATGCTTTCTTTTATTTTTGTAAGTTTACAAGTCAGTTT  246

seq1  AAAATTAGTAATTCATATGTTATATTCATTTTCTGTAATAAGTGGGTTAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGTAATTCATATGTTATATTCATTTTCTGTAATAAGTGGGTTAA  296

seq1  AATCCTCTGATATATTCTGCTGTTTCATCAAAATTGTGTACAGTGTCTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTGATATATTCTGCTGTTTCATCAAAATTGTGTACAGTGTCTTG  346

seq1  AAGAACTTCAAAAAGTACTTAAGAAATACACCCAAGAATTAATTTAGAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTTCAAAAAGTACTTAAGAAATACACCCAAGAATTAATTTAGAAA  396

seq1  ATCACATCCCGTAGATTGATATAAACACAAGCAAGAAAGGAGACAATAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCCCGTAGATTGATATAAACACAAGCAAGAAAGGAGACAATAGT  446

seq1  ATCATTCATTGTAGTCAAGATATATAAATAAGAAGTAGAAGCAAAAAAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCATTGTAGTCAAGATATATAAATAAGAAGTAGAAGCAAAAAAAT  496

seq1  TATAATAGTTATCTAGAGGAAGGAACTGATTTAGGAATTATTAGAAAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGTTATCTAGAGGAAGGAACTGATTTAGGAATTATTAGAAAGCA  546

seq1  AATATATAAAAATGCATAGCTACAATTTAGAGAAAATCTGGTCCTAATAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAAAAATGCATAGCTACAATTTAGAGAAAATCTGGTCCTAATAT  596

seq1  AATATAAAGATTGTTTCACTTAAAATTAACACCCTTCAGTTCACATTCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGATTGTTTCACTTAAAATTAACACCCTTCAGTTCACATTCTG  646

seq1  AGGAAATAAAATTTATGTTGATAAAAACTGGAAAGGCACATAGCTGATAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAAAATTTATGTTGATAAAAACTGGAAAGGCACATAGCTGATAG  696

seq1  ACCTCAGAAAACCACTGGTAGAAATATGTAGAAATAAAACAATGATTGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAAAACCACTGGTAGAAATATGTAGAAATAAAACAATGATTGAG  746

seq1  AACATGAAATTTTTCAGTAACACCATGAAAACTAAAATTAATGTGACTAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAATTTTTCAGTAACACCATGAAAACTAAAATTAATGTGACTAT  796

seq1  CGCACAGGATATTGAGATTTATAATTATTTTCTCTAAAATAATCTGAAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACAGGATATTGAGATTTATAATTATTTTCTCTAAAATAATCTGAAGA  846

seq1  GACGGAAGTATCACAGTAGAATGAATAAAGTTGGTCAAGGCCTTACAACG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAAGTATCACAGTAGAATGAATAAAGTTGGTCAAGGCCTTACAACG  896

seq1  GGGGAGTTGGAGAGAAAGAAATATTAGTGCACAGAATTCCAGAGTCTTAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTGGAGAGAAAGAAATATTAGTGCACAGAATTCCAGAGTCTTAC  946

seq1  TTATTTATGTGTTTGTTCACTTGCTTTGCATTTTGACAAGAGGTCCTCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATGTGTTTGTTCACTTGCTTTGCATTTTGACAAGAGGTCCTCTG  996

seq1  AAGCCAATTCTAGTCTCAAGCTCACCATCCGTATCTGAATTACATTGAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAATTCTAGTCTCAAGCTCACCATCCGTATCTGAATTACATTGAAT  1046

seq1  TGCTGATCATGTTTTGTTACCTACACCCAAGTGCTGCCAAACCTAGCATC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATCATGTTTTGTTACCTACACCCAAGTGCTGCCAAACCTAGCATC  1096

seq1  TAGATTTTTTTAAGCAGTGATAGAAAAAGAATTC  1129
      ||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTTTAAGCAGTGATAGAAAAAGAATTC  1130