BAC Information

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BAC

Clone NameB6Ng01-240D22
Chromosome2 (Build37)
Map Location 108,296,106 - 108,297,179
singlet/doubletsinglet
Overlap geneLOC100043078
Upstream genenone
Downstream geneLOC668790, LOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240D22.bB6Ng01-240D22.g
ACCGA050464GA050465
length1,2051,077
definitionB6Ng01-240D22.b B6Ng01-240D22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ttgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
aaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacatgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcactttccttagttagagtcacgccaagatattttatatta
tttgtgactattggagaagggtgttgtttcctaatttctttctcagcctg
tttattcttttgtatagagaaaggccattggacttgttgagtttatttta
ttatcagcttactcatcgaagcctgtttattcagtttaggagttcctctg
gtagaatttttaggttcactatataatactatcatattcatcggcaaagc
gcatatgttggacttccctcttttcccagtttggtatatccccctgttga
aactc
gaattcaggtcctcatacttgtgggtcaaacactgtctataaagaaacca
tctcccaagtgcagcactggatagctgtatccattccctaagtgctgaaa
ttacagggttatgccaccgtacctggctgtgaaaatccttttaagcacag
caatataacgacccatacaacatgcttatgggcttgctcacttaaagcac
ccaaattcaagaaaagaaagtcaaataaattctgagaagttatgcctcaa
aatgcagcagaggggaaatatgttagtacttggaagattacagaggatgg
aaagtaagaaacacgcgcgcgcgcacacacacactcacacacacacacac
agacagacacacacacacacaaaacagaaagaaggaacttactattagct
acatattctttccacagttttctgagtttacttaattctgattgtaattc
gtagttcagcctgagcaacatttatgttcagtgctgtaagtggaggttga
atttgcatttagctttatacattgaatcctccttttgtcattattttact
tttgaagattttagattttcttaaattaacaattgatgcaaaagtgctcc
aactgcaacaaaaatagaaacttaggaaaaataaagtactcttgagaaca
tttaaaaatagaataattttattctaacaagctgatgatctcatgtcagt
gactcaaagggaaatcagacaatgtacttcagtgcctttcctgatttgag
gaaactgaggcagcattttcatcagctctgaacacaggccacactgggat
ttaattaattggaccttaggctctatacagagtatttcattttcattgct
cttatttaaaagccatgtataaaagtatttgtatgctacgggaaataact
gataaataattaatattctatgggcttggctagtctgctcttctttaaat
cttgaggctatatgcatggccttgcctttcagtaccaagatgtaatccac
cctgaaaaagaaccacaaagaataattttaattttacttcgcaacctgta
acctagcataaaagagtataaactaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108296106_108297179
seq2: B6Ng01-240D22.g_67_1143 (reverse)

seq1  TCTAG-TTATACTTCTTTTATGCTAGTTTACA-GTTGCGAAAGTAAAATT  48
      ||||| |||||| ||||||||||||| ||||| |||||| ||||||||||
seq2  TCTAGTTTATAC-TCTTTTATGCTAGGTTACAGGTTGCG-AAGTAAAATT  48

seq1  AAAATTA-TCTTTGTTGTTC-TTTTCAGGGTGGATTACATCTTGGTACTG  96
      ||||||| ||||||| |||| |||||||||||||||||||||||||||||
seq2  AAAATTATTCTTTGTGGTTCTTTTTCAGGGTGGATTACATCTTGGTACTG  98

seq1  AAAGGCAA-GCCATGCATATAGCCTCAAGATTTAAAGAAGAGCAGACTAG  145
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGGCCATGCATATAGCCTCAAGATTTAAAGAAGAGCAGACTAG  148

seq1  CCAAGCCCATAGAATATTAATTATTTATCAGTTATTTCCCGTAGCATACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCCATAGAATATTAATTATTTATCAGTTATTTCCCGTAGCATACA  198

seq1  AATACTTTTATACATGGCTTTTAAATAAGAGCAATGAAAATGAAATACTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTTATACATGGCTTTTAAATAAGAGCAATGAAAATGAAATACTC  248

seq1  TGTATAGAGCCTAAGGTCCAATTAATTAAATCCCAGTGTGGCCTGTGTTC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGAGCCTAAGGTCCAATTAATTAAATCCCAGTGTGGCCTGTGTTC  298

seq1  AGAGCTGATGAAAATGCTGCCTCAGTTTCCTCAAATCAGGAAAGGCACTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGATGAAAATGCTGCCTCAGTTTCCTCAAATCAGGAAAGGCACTG  348

seq1  AAGTACATTGTCTGATTTCCCTTTGAGTCACTGACATGAGATCATCAGCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACATTGTCTGATTTCCCTTTGAGTCACTGACATGAGATCATCAGCT  398

seq1  TGTTAGAATAAAATTATTCTATTTTTAAATGTTCTCAAGAGTACTTTATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAATAAAATTATTCTATTTTTAAATGTTCTCAAGAGTACTTTATT  448

seq1  TTTCCTAAGTTTCTATTTTTGTTGCAGTTGGAGCACTTTTGCATCAATTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAGTTTCTATTTTTGTTGCAGTTGGAGCACTTTTGCATCAATTG  498

seq1  TTAATTTAAGAAAATCTAAAATCTTCAAAAGTAAAATAATGACAAAAGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAAGAAAATCTAAAATCTTCAAAAGTAAAATAATGACAAAAGGA  548

seq1  GGATTCAATGTATAAAGCTAAATGCAAATTCAACCTCCACTTACAGCACT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAATGTATAAAGCTAAATGCAAATTCAACCTCCACTTACAGCACT  598

seq1  GAACATAAATGTTGCTCAGGCTGAACTACGAATTACAATCAGAATTAAGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAAATGTTGCTCAGGCTGAACTACGAATTACAATCAGAATTAAGT  648

seq1  AAACTCAGAAAACTGTGGAAAGAATATGTAGCTAATAGTAAGTTCCTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAAACTGTGGAAAGAATATGTAGCTAATAGTAAGTTCCTTCT  698

seq1  TTCTGTTTTGTGTGTGTGTGTGTCTGTCTGTGTGTGTGTGTGTGAGTGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTGTGTGTGTGTGTCTGTCTGTGTGTGTGTGTGTGAGTGTG  748

seq1  TGTGTGCGCGCGCGCGTGTTTCTTACTTTCCATCCTCTGTAATCTTCCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCGCGCGCGCGTGTTTCTTACTTTCCATCCTCTGTAATCTTCCAA  798

seq1  GTACTAACATATTTCCCCTCTGCTGCATTTTGAGGCATAACTTCTCAGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAACATATTTCCCCTCTGCTGCATTTTGAGGCATAACTTCTCAGAA  848

seq1  TTTATTTGACTTTCTTTTCTTGAATTTGGGTGCTTTAAGTGAGCAAGCCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGACTTTCTTTTCTTGAATTTGGGTGCTTTAAGTGAGCAAGCCC  898

seq1  ATAAGCATGTTGTATGGGTCGTTATATTGCTGTGCTTAAAAGGATTTTCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATGTTGTATGGGTCGTTATATTGCTGTGCTTAAAAGGATTTTCA  948

seq1  CAGCCAGGTACGGTGGCATAACCCTGTAATTTCAGCACTTAGGGAATGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGTACGGTGGCATAACCCTGTAATTTCAGCACTTAGGGAATGGA  998

seq1  TACAGCTATCCAGTGCTGCACTTGGGAGATGGTTTCTTTATAGACAGTGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTATCCAGTGCTGCACTTGGGAGATGGTTTCTTTATAGACAGTGT  1048

seq1  TTGACCCACAAGTATGAGGACCTGAATTC  1074
      |||||||||||||||||||||||||||||
seq2  TTGACCCACAAGTATGAGGACCTGAATTC  1077