BAC Information

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BAC

Clone NameB6Ng01-242L02
Chromosome2 (Build37)
Map Location 41,535,776 - 41,536,527
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242L02.bB6Ng01-242L02.g
ACCGA052269GA052270
length1,1921,117
definitionB6Ng01-242L02.b B6Ng01-242L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaagatttctaacagagaacaaacactaatacttcttaaatt
tttcctgtaattgtaaattaagccgtgtttacaaataatttcaaagagaa
cgaatactaaaacgaataccaaaccaatgaaaattatgtgccaatatctc
tgatgaatatgaaaaaattctcactgaaattattgcaaaccaaattaaaa
aacacaaaaaagattgtccattataataaaggtggctttatcccaaagat
acaaggatctttcaacatgaggaaataaatgaataaatgtaatctgtcac
ctaaagagacttaaagacagaaactatatgagcatttcattagctacata
aaaaatttaataaaattccacaacttttaaaaacatagaaatcctggagt
acccatggatacagggaacatagcttaacatgttaaaggcaatattcagc
aaaaccacagcaattttaggataaagaaaaactcaaatcatttctacccc
aatcagcaactcaataaggatgcccactccctgacattttatttaatagt
gtgcttgaaattttcactagtgaaaaaaaaagtatgtgaaagacagaaat
gaaaacataggagaataaaaaggcaatgtattcttattttctaatcatat
cgttccacgtattaaaaaaccctaaagattccatgagataactcctacag
ctgataaactcattcattgaagtagcaggttacaaaattaacccacaaaa
agtcaacaggtttcttatagattagtgacaaggatactaagaagaactat
gagaaacaactctattcacaagagtctcaaaattaaaagagttgtaataa
agctaatgaagcaagtaaaagacttatgcattgaaaattaaagaaggaaa
ataaaacctaccagaagagggaacggccctttatgcttatggattgacgc
tatgaaacttacctctgtaccattacaaaaggaacctacttattaaatac
aatcaccatcaagctcaaaatccattcttcaccgaagttgaaaacaaatt
attctattttacatactgaaaacagattatcttatatttacatatatcat
ggtgatgttctcagaattttcatatttttatccactgcaggtatagttag
gatcattgagacacattaggaattattccttctctcctctct

gaattctttgtttagctctgtagcccattttttaatagggttattagatt
ttctggagaccatcttcttgagttctttatctatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttgctggcct
ttttgtcttattgacagtgtcttttgccttacagagctttgcaattttat
aagttcacatttgtcaattcgcgatcttacagcacaggccattgctgttc
tgttcaggaatttttcccctgtgcccatatctttgaggattttcccccct
ttctcctctataaatttcagtgtctctggttttatgtggagttccttgat
ccactcacttagacatgatcttattacaaggagataagaatggatcaatt
cgaattcttctacaacagcaccatttgttgaaaaacctatctttttccac
tggatggttttagctgccttgtcaaagatcaagtgactataggtgtgtgg
gttcatttctggttcttcaattcttttccttttgtctgcctgtctgtcct
tgtacctgtaccatacagtttttatcacaattgctctgtagtatagcttt
aggtcaggcatggtgattccccgagaggttcttttattgttgagaagaga
tttgctaccctaggttttttgtaattccagatgaattcacaaattgccct
tccttttgaccttaatactcagtatttcaataactgattacaattggagg
aacagtcttcaaagaggtaattagtgaaaataagcttactagtattgggt
tccaatcaaaaattactttcagccttcttagaaagaaattggtgacagag
agagtcaccagaagtttgcatgtgaaagaatggttgtgtgaaaactctgt
gtgggacatgccagcatttacaaacccagataccctggaggaattccatt
gtaagcattcgggttatggaacttccagattccatatccattgtggcaca
caaatggtctcttattttgactatgtatcaataataaaatcttcagcatg
ttggatagaagcaccccctttaaaattatggagaacaaaagaagttttac
tagaaaacctcatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41535776_41536527
seq2: B6Ng01-242L02.g_442_1181

seq1  AAGGAGATAAGAATGGATCAATTCGAATTCTTCTACAACAGCACCATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATAAGAATGGATCAATTCGAATTCTTCTACAACAGCACCATTTG  50

seq1  TTGAAAAACCTATCTTTTTCCACTGGATGGTTTTAGCTGCCTTGTCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAACCTATCTTTTTCCACTGGATGGTTTTAGCTGCCTTGTCAAAG  100

seq1  ATCAAGTGACTATAGGTGTGTGGGTTCATTTCTGGTTCTTCAATTCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGACTATAGGTGTGTGGGTTCATTTCTGGTTCTTCAATTCTTTT  150

seq1  CCTTTTGTCTGCCTGTCTGTCCTTGTACCTGTACCATACAGTTTTTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTCTGCCTGTCTGTCCTTGTACCTGTACCATACAGTTTTTATCA  200

seq1  CAATTGCTCTGTAGTATAGCTTTAGGTCAGGCATGGTGATTCCCCGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCTCTGTAGTATAGCTTTAGGTCAGGCATGGTGATTCCCCGAGAG  250

seq1  GTTCTTTTATTGTTGAGAAGAGATTTGCTACCCTAGGTTTTTTGTAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTATTGTTGAGAAGAGATTTGCTACCCTAGGTTTTTTGTAATTC  300

seq1  CAGATGAATTCACAAATTGCCCTTCCTTTTGACCTTAATACTCAGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATTCACAAATTGCCCTTCCTTTTGACCTTAATACTCAGTATTT  350

seq1  CAATAACTGATTACAATTGGAGGAACAGTCTTCAAAGAGGTAATTAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACTGATTACAATTGGAGGAACAGTCTTCAAAGAGGTAATTAGTGA  400

seq1  AAATAAGCTTACTAGTATTGGGTTCCAATCAAAAATTACTTTCAGCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTTACTAGTATTGGGTTCCAATCAAAAATTACTTTCAGCCTTC  450

seq1  TTAGAAAGAAATTGGTGACAGAGAGAGTCACCAGAAGTTTGCATGTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGAAATTGGTGACAGAGAGAGTCACCAGAAGTTTGCATGTGAAA  500

seq1  GAATGGTTGTGTGAAAACTCTGTGT-GGACATGCCAGCATTTACAAACCC  549
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAATGGTTGTGTGAAAACTCTGTGTGGGACATGCCAGCATTTACAAACCC  550

seq1  AGATACCCTGGAGGAATTCCATTTGTAAGCATTCGGTTTATGGAACTTTC  599
      ||||||||||||||||||||| |||||||||||||| ||||||||| |||
seq2  AGATACCCTGGAGGAATTCCA-TTGTAAGCATTCGGGTTATGGAAC-TTC  598

seq1  CAGATTCCATATCCATTGTTGGCACCACAAATGGTCTTCTATTTTGACTA  649
      |||||||||||||||||| ||||| ||||||||||||  |||||||||| 
seq2  CAGATTCCATATCCATTG-TGGCA-CACAAATGGTCTCTTATTTTGACT-  645

seq1  ATGTATCAAATTAATAAAATTCCTCCAGCATTGTTTGATAGAGCAACCCC  699
      |||||||||  |||||||||  || ||||| |||| ||||||  | | ||
seq2  ATGTATCAA--TAATAAAAT--CTTCAGCA-TGTTGGATAGA--AGCACC  688

seq1  CCTTTTAAAATTATTGAGAACAAAAGAAAATTTTTACTAGAAAA-CTCAT  748
      || ||||||||||| |||||||||||  || ||||||||||||| |||||
seq2  CCCTTTAAAATTATGGAGAACAAAAG--AAGTTTTACTAGAAAACCTCAT  736

seq1  GAAA  752
      ||||
seq2  GAAA  740


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